AMCG00009032



Basic Information


Item Value
gene id AMCG00009032
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20263075 ~ 20263866 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00009032
ATGCTGCCCGTCCCAGGCGTTCACTCCAAGGGCTTCACCGCCCTTTTTAAGGGTGGGGGCGTGGGGCACATGGGCTCTGACATCTCCCCGGTGGTTCCCACGGAACGGAATATGTATGCTGCCCGCCCCAGACAGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGGTGAGTGCGTGGGGACACATGGGCTCTGACATATCTCCAGTGGCTGCCACGAAATGGAATATGTATGCTGCCCGCCCCAGGCAGGAACCCCAAGGGCTGTCCCGGCCTTTAAGGCCGATCGAAAGGGAGTCGGGTTCAGATCCCCGAATCCGGAGCAGCGGAGACGGGCGCCGCAAGGCGTCCAGTGCGGTAACGCGACCGATCCCAGAGAAGCCAGCGGGAGCCCCGGGGAGAGTTCTCTTTTCTTTGTGA

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00009032 True 447 mRNA 0.62 3 20263075 20263866

Neighbor


gene id symbol gene type direction distance location
AMCG00009025 atp11b coding upstream 313640 19939076 ~ 19949435 (+)
AMCG00009026 LOC107550661,LOC107566880 coding upstream 347169 19861278 ~ 19915906 (+)
AMCG00009016 rfc4,LOC103355474 coding upstream 1888807 18361526 ~ 18374268 (+)
AMCG00009014 NA coding upstream 2042822 18219072 ~ 18220253 (+)
AMCG00009006 ect2,LOC107593151 coding upstream 2222114 18036794 ~ 18040961 (+)
AMCG00009034 nlgn1 coding downstream 192591 20456457 ~ 20461014 (+)
AMCG00009035 nlgn1,LOC106584306 coding downstream 422279 20686145 ~ 20692387 (+)
AMCG00009038 NA coding downstream 734032 20997898 ~ 21087025 (+)
AMCG00009042 NA coding downstream 2166474 22430340 ~ 22441467 (+)
AMCG00009043 NA coding downstream 2349486 22613352 ~ 22631352 (+)
G53793 LOC107745311 non-coding upstream 50273 20136632 ~ 20212802 (+)
G53791 NA non-coding upstream 159075 20103780 ~ 20104000 (+)
G53764 NA non-coding upstream 232644 20030156 ~ 20030431 (+)
G53762 NA non-coding upstream 233071 20029294 ~ 20030004 (+)
G53711 LOC107656862,LOC107568628,LOC107722250,LOC107708830,LOC107578399,LOC107681826 non-coding upstream 277192 19983869 ~ 19985883 (+)
G53812 NA non-coding downstream 26912 20290778 ~ 20317034 (+)
G53834 NA non-coding downstream 185863 20449729 ~ 20544953 (+)
G53855 NA non-coding downstream 367582 20631448 ~ 20724272 (+)
G53877 NA non-coding downstream 470489 20734355 ~ 20734623 (+)
G53878 NA non-coding downstream 495803 20759669 ~ 20759870 (+)
AMCG00009022 dnajc19,LOC107727073 other upstream 715568 19527897 ~ 19547507 (+)
G53520 NA other upstream 1709115 18550772 ~ 18553960 (+)
AMCG00009009 NA other upstream 2342483 17917548 ~ 17920592 (+)
G53298 mybpc2 other upstream 2532415 17729366 ~ 17730660 (+)
AMCG00008995 NA other upstream 2919399 17330892 ~ 17343676 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other downstream 112929 20376795 ~ 20396356 (+)
G53911 NA other downstream 904365 21168231 ~ 21168575 (+)
G53915 NA other downstream 1010745 21274611 ~ 21275354 (+)
G53917 NA other downstream 1028375 21292241 ~ 21293901 (+)
G54263 NA other downstream 3619451 23883317 ~ 23975906 (+)

Expression



Co-expression Network