AMCG00009038



Basic Information


Item Value
gene id AMCG00009038
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 20997898 ~ 21087025 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00009038
ATGGCAAACACAGCAAGTAACAACATGGCCTATAGGAAGGTGACAGCTGGACATGGTGCACCTTTGTACTCTCGGGACCTGGAAAGCGAGGAGCTACAGGGCACAGCCCTAGACCTGGAGTGGGACATGgagaaggagctggaggagccAGGGTTTGACCGGTTCCACCTGGAAGACAGCCCTTAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00009038 True 186 mRNA 0.56 2 20997898 21087025

Neighbor


gene id symbol gene type direction distance location
AMCG00009035 nlgn1,LOC106584306 coding upstream 305511 20686145 ~ 20692387 (+)
AMCG00009034 nlgn1 coding upstream 536884 20456457 ~ 20461014 (+)
AMCG00009032 NA coding upstream 734032 20263075 ~ 20263866 (+)
AMCG00009025 atp11b coding upstream 1048463 19939076 ~ 19949435 (+)
AMCG00009026 LOC107550661,LOC107566880 coding upstream 1081992 19861278 ~ 19915906 (+)
AMCG00009042 NA coding downstream 1343315 22430340 ~ 22441467 (+)
AMCG00009043 NA coding downstream 1526327 22613352 ~ 22631352 (+)
AMCG00009049 trpc1 coding downstream 1545692 22632717 ~ 22648476 (+)
AMCG00009050 u2surp coding downstream 1582859 22669884 ~ 22686612 (+)
AMCG00009052 chst2 coding downstream 1617161 22704186 ~ 22705397 (+)
G53886 NA non-coding upstream 23711 20973977 ~ 20974187 (+)
G53884 NA non-coding upstream 87750 20909894 ~ 20910148 (+)
G53882 NA non-coding upstream 92550 20905053 ~ 20905348 (+)
G53878 NA non-coding upstream 238028 20759669 ~ 20759870 (+)
G53877 NA non-coding upstream 263275 20734355 ~ 20734623 (+)
G53912 NA non-coding downstream 144325 21231350 ~ 21231697 (+)
G53913 NA non-coding downstream 144729 21231754 ~ 21232205 (+)
G53938 NA non-coding downstream 486349 21573374 ~ 21573766 (+)
G53946 NA non-coding downstream 593720 21680745 ~ 21681260 (+)
G53950 NA non-coding downstream 684251 21771276 ~ 21771532 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other upstream 601542 20376795 ~ 20396356 (+)
AMCG00009022 dnajc19,LOC107727073 other upstream 1450391 19527897 ~ 19547507 (+)
G53520 NA other upstream 2443938 18550772 ~ 18553960 (+)
AMCG00009009 NA other upstream 3077306 17917548 ~ 17920592 (+)
G53298 mybpc2 other upstream 3267238 17729366 ~ 17730660 (+)
G53911 NA other downstream 81206 21168231 ~ 21168575 (+)
G53915 NA other downstream 187586 21274611 ~ 21275354 (+)
G53917 NA other downstream 205216 21292241 ~ 21293901 (+)
G54263 NA other downstream 2796292 23883317 ~ 23975906 (+)
AMCG00009085 NA other downstream 3725593 24812618 ~ 24816534 (+)

Expression



Co-expression Network