AMCG00009069


Basic Information

Item Value
gene id AMCG00009069
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 24200357 ~ 24206521 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009069
TTGGCTAATGGCATTATACAACCTCTGAAATCGACTTCCTCAGAATTGAATTTGTGGATGCGAATTTCTATATTATTCAGCAGGTTAAGCAGGCTAGTACAGATACTGCAGATATGAAGTCGGCTTTAGCGGTGGTGTTTCTGTTTTCCCTTCTGTCTGCATACTACGTTTACATTCCGCTGCCAAGCACGGTTTCAGAACCATGGAAACTCATGCTGTTGGATGCAACTTTCCGAGGGGTCCAGCATCTGGGGAACCTATTTCATGATCTGGGCCTGAGCCACCATATCCGGGTGCTGAACTTCGTGGTGCTGAACTTTGGGATGCTGGCTCCTGTGTCCAGCGAGGCGGTGCGGGTGAGCGACACCATGTTCAATGGGGTGCTGGTGAGAGTCTTCGAGTACAACAAGGAGCCGGGTGACGCACTGAAGAGGAGTGTGGTTTATCTCCACGGAGGAGGGTGGGCCCTGGGTAGTGCCAGGATAAGGTCATATGACCATCTATGTAGGAAAATGGCCGAAGACTTGAAGGCCGTAATTGTTTCCATTGAtTATCGACTGGCCCCAGATGTGCATTTTCCTGAGCAGTACAATGATGCATTCCTTGCAACCAAGCATTTTCTGCAGCCAGAGGTGTTGTCAAAATATTCTGTGGATCCGGCCAGGGTGTCAGTGTCTGGTGACAGTGCTGGAGGGAACTTGGCTGCCGCAGTGGCACAACAGCTTGCTCTGGACAGTAGTATTACCAATAAGTTCAAGCTCCAGTCCCTAATTTACCCAGTGCTGCAGGCTCTTGATTTCAACACGCCCTCCTACCAGCAGAACCGAGATGTGCCTATCCTGTACCGGCCACTCATGGCACGCTTTTGGCTGGAGTATCTGAATGGGGACCCCAGCTTCATCCAGCCCCTGTTGGTCAACAACCACACGGCCCTGGACCTCAGCCAAGCCACTGTGAGCCGAGCCAAGCTCAACTGGACCTTGCTGCTCCCTTCGGCCTTCAAGAAGAATTACAAGCCAGTGGTCCAGGCCATGGGCACGCCCAAGGTCATTGAAGAGGTGCCTGGCCTACTAGATGCAAGAGCTGCCCCACTGTTGGCCGACCAGGAAGTCTTAAGGATGCTGCCACGGACCTACATCCTTACCTGTGAACACGATGTCCTCCGAGATGATGGGATCATGTACGCCCGGCGCCTGGAGGAAGCCGGCATCCCCGTCACCCACGACCACTACGACGACGGCTTTCATGGCTGCATGATATTCGGGATCTGGCCCACCTATTTCTCTGTTGGTGTTCGGACCATGAACAACTACATCAAGTGGCTGGATGAGAATCTTTAGGTGTTCCtttgtgaatgtatgtgtgtatatttgtatgtgagtttgtgtgtaatAGATGAATAATTATGCCACTGCATATGtactttaaagaaaacacatgagaaaataatgcacttttataatgtCTAGTGCAATGCAACACGCCAATGCAAACCTAGCTTGACCTACAGCTGTATTTGGGCAAGAGTCTTGTCTTCCAAAGTCTTGTTTTAGCCGCAGTCGTCAGCATTCCTTTAAGAAATTGAAGCTGTTCTGTGTATCATGGCACTGAAACGTGTTACATTTGTCAAATGAGCTCATTGTTTTGCACTGCACTGGTTTAACCACAGGTGTTATAGTGAGTTCATATGGTACATATTATGAAGTATCGctttaatgtgcttttttaaaggAGTACATTCAAGTATGTTTATGAGAAGAGGAGTGATTAAAAATTACAACTTTAAGCTGTAGTATTTGGAccaagtgaagaaaaaaaattgatttataaaaattCTTCTtccaatattttgaaataaatatagcagtatttcaattttatttcatttattttttgtttaaaaagtatttgttcaAAATGGCAAAGATCACCTCAGAAGCAGTACACTTTATAGAAATACACTGAATTCACTGAACCCTTACCAAGAGTtaagtgtaaaaaaaactaaaaataaattaaaagaagtATCACTGAGACAGTGCAAGAGTTCATCACTTAAATGTAGtcatagctatatatatatatttgttttaaactcttGACTATACAGTGGCAATTTCTTTAGTATTTGAAGGGAACAGGTAGTGCAATGGAGATGCAATACCTGTAGGAGTTGTTACATTTAAGTCCTATTTACAGACTTACATTGTTAGGTGAAGCAAATTGTATGTAGGTAATTTAGCAGGTTTTAAGCAATATGCTTTCTGTCAGtatgctttttaatgtaattttaatttggtGTTTGGCctagctctttttttttttacaaactgcAGTTGCACTGCTCTAGTCTTTGGACTTACTGAGTACATACAGAACTGGATAATTTTAAGTGAATTTGAATGTGAACGAGATCCACAAGTCTCAACCCAATTCACTCTAAATACAATATAAGGCTTTTACTTCAACCTACctggtttatattttatttattctttttgttgtagtttttatgTTGGGTGAAACTTCTGAAATGCGTGGGCACAATCCAGAGTGGACAAATCCAATTGCTACGTCGTGTATCATTTACTCGCTTTGCAGTCTCTAAGCACACTTTACTTAGATTGTGGCTATGCCTACATCTTGtagattttattaattcagaCTTGTGAATGTATCTATATTGTATGTCAAGATGGAGaactaaaacaaatttaaattaacattatttctTTATAACATTTGGCTTCATTTTGTACATAGGGGGTTTTAACACTGTTGGAttgctttaacaaaatgttttgataTTGTCAACCGGA

Function

GO:

id name namespace
GO:0016787 hydrolase activity molecular_function

KEGG:

id description
K14349 NCEH1, AADACL1; neutral cholesterol ester hydrolase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009069 True 2819 mRNA 0.42 5 24200357 24206521

Neighbor

gene id symbol gene type direction distance location
AMCG00009066 NA coding upstream 128627 24063842 ~ 24071730 (+)
AMCG00009064 stag1a,stag1,LOC107722576,LOC107688487,LOC107709887,LOC107586054,LOC106575446 coding upstream 150413 24029392 ~ 24049944 (+)
AMCG00009061 NA coding upstream 314533 23872708 ~ 23885824 (+)
AMCG00009059 NA coding upstream 359375 23825222 ~ 23840982 (+)
AMCG00009058 NA coding upstream 375270 23816825 ~ 23825087 (+)
AMCG00009070 NA coding downstream 5895 24212416 ~ 24216847 (+)
AMCG00009072 ghsra,LOC107732507,LOC107680230,LOC107550603,LOC107586567,LOC107688542 coding downstream 12283 24218804 ~ 24221967 (+)
AMCG00009079 NA coding downstream 255417 24461938 ~ 24498489 (+)
AMCG00009076 tnik,LOC103024681,LOC107721871,LOC107663657 coding downstream 359918 24566439 ~ 24631632 (+)
AMCG00009078 NA coding downstream 427869 24634390 ~ 24647480 (+)
G54328 NA non-coding upstream 34296 24165790 ~ 24166061 (+)
G54264 NA non-coding upstream 306070 23890127 ~ 23894287 (+)
G54238 NA non-coding upstream 535705 23664157 ~ 23664652 (+)
G54237 NA non-coding upstream 536263 23663393 ~ 23664094 (+)
G54194 NA non-coding upstream 750880 23447154 ~ 23449477 (+)
G54356 NA non-coding downstream 71384 24277905 ~ 24278561 (+)
G54430 NA non-coding downstream 576989 24783510 ~ 24787085 (+)
G54547 NA non-coding downstream 965480 25172001 ~ 25172864 (+)
G54563 NA non-coding downstream 1101739 25308260 ~ 25308495 (+)
G54566 NA non-coding downstream 1140757 25347278 ~ 25348983 (+)
G54263 NA other upstream 224451 23883317 ~ 23975906 (+)
G53917 NA other upstream 2906456 21292241 ~ 21293901 (+)
G53915 NA other upstream 2925003 21274611 ~ 21275354 (+)
G53911 NA other upstream 3031782 21168231 ~ 21168575 (+)
AMCG00009033 nlgn1,LOC103399994,LOC102210587,LOC102311540 other upstream 3804001 20376795 ~ 20396356 (+)
AMCG00009085 NA other downstream 606097 24812618 ~ 24816534 (+)
AMCG00009088 LOC104966806,LOC108444346 other downstream 691595 24898116 ~ 24917863 (+)
AMCG00009104 NA other downstream 1283190 25489711 ~ 25493573 (+)
AMCG00009108 NA other downstream 1378361 25584882 ~ 25587615 (+)
AMCG00009129 NA other downstream 2587016 26793537 ~ 26796768 (+)

Expression


Co-expression Network