AMCG00009094


Basic Information

Item Value
gene id AMCG00009094
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 24967917 ~ 24974656 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009094
GACGCCTCTCCGCCactaaatggttaaaaaaaaattacgtCTTTGCAAAATGGCTGaatgacagagaaaaaaaatggacCAAACCTTTTATCAGGTTTAAGGGAGTGACGCCATTCCCTCTTTAATATGCAGCCTCCTCATCACTGCCAGCACCTTCTAGACCAGCTCAACAAGCAGAGAGAGGCCGGCTTCCTGTGTGATTGCACTATTGTGGTTGGTCAGTCCCAGTTCCGTGCTCACAGAAATGTACTGGCAGCATTTAGTGAGTTCTTCAGTTTGCAATGGGGGAATCCAGCTGAGAATGGCGTCACATTTCTGGACCCAGTGATGATAAATGAAGAAGGGTTTGAGAAGCTGTTGGATTTCATGTACACTGGGGAGATGTCTATTGACAGCTGCAAAGTGACAGAGGTACACAAAGCCGCTACTTTCCTGAAAATGGAGGCGGCAGTAGCATGGTTTAAGCTGAAGCTGGGGTCTGTGATGGCCGACGTCAAGCCTTCTTTTAGAGAGAGTATGATTGCAGAGAGGGAGACTGATGCCCACATGGAGAATGAAGACCTTCCCAAGGCAAGTGAAGCAAAGGAGATGCCGACCACAGAGGAGAACCAGGAGCTTGTTCTTCTGCTGCCTGGGGACACAGAACGGTATACACAGGGGCTGGAAAAGACCGGAAGGAAAGCTAGAAAACCTAAGAACACAAGTGATGGCACTGGCCAACAGAGGAGGAGCACGCAACAGAAGGAAAGGAGACAACTGAAGAGTGGGTCTCAACCCCTGCAGGGTGAAGCCTTCAGTGATGCCAGCAACAAGACGACCCCGGACGGCACCGGGCAGGGAGCACCGGCCAGTGAGGAACTGGATAGTGAGTCCCTTGCTGCTATGGACAATGGGGGCCTGGCAGACCAAAGCACAGCAAGTTGCAAGCTTTCTCTCAAGCGTGGGAAAGCGCGTAAGCACTGCACGCTGAAGGAGAACTGTGCCTCAGACCCCCCCAGCGAGGAAAACAATGATAGCTTGGAGAGCACGGAGGCAGAGGGGCTGGCTGACAAACAGCTGAAAACGAAACCTATGTGCAACACTTGTGGGAAGGTGTTCTCTGAGGCCAGCAGCCTGCGAAGACACATGCGTATTCACAAGGGGGTAAAGCCCTATGTGTGCCAGCTATGTGGAAAGGCATTCACACAGTGCAACCAGCTGAAGACCCATGtccgcacacacacagGGGAGAAGCCATACCAATGTGATCTGTGTGACAAGGGTTTTGCTCAGAAATGTCAGCTGGTCTTTCACAGCCGCATGCACCACGGAGAGGAAAAACCATATAAGTGTGACATCTGCGGCCTACAGTTCGCTACATCCAGCAATCTCAAAATACACGCCAGGAAGCATAGCGGTGAGAAGCCGTATGTATGTGACCGCTGTGGCCAGAGTTTTGCCCAGGCCAGCACGCTGACCTACCATGTGCGCCGTCACACCGGAGAAAAGCCCTACATCTGCGACACCTGTGGGAAGGCCTTTGCCGTCTCCAGCTCCCTCATCACCCACGCACGCAAACACACAGgCGAGAAACCATACATGTGCCGAACCTGTGGGAAAAGCTTCATATCTTCTGGAGAGCTCAATAAACACTGCAGATCTCATACAGGTGAAAAGCCATTTGTGTGTGAATTGTGTGGAAACTCTTATACAGACGTGAAGAATCTCAAGAAGCACAAAGCAAAGGCTCATGGAGTTGAAAAAAGCCTAGATCCTAGCTCTAGCTCTGCTGCCTTTGAGGAAGGAGAGGCGTTGCAGAAAGTCTCTTTACCGGACACAGTGGAGCTCAAGTCAGCGGATATACCACTATCCCTCACTATTCCCGTGGCCTCTGAAGAGCATCAGATGCTCCTGTCAGGCACAGACAACTCCTCCATCCCTTCAGACCAGCTGCTGAGATCTGCAGTAACAGGCTATTCAGAACCCCAGTTCATCTTTCTGCAACAGCTCTACTGAATACGCACATGTGGACACCTTATGGGAATGATTCCAGATCAATACTGACTCATTAACAACACTCTGCAACTGAAAATCTTACCCGTCACTGTAAAGGGCACTGAAAGTGAAAAAGCatgacatgcatacatacataaaccaTGTAAAAGGTTGAATACGACTTGGTGGTGTTGTCTTTGTGCAGTGCTAGGGAAACTGTTAATGCACTGTGTATGCAGAAATACTAACTTAATAGTAGAATCTGAAGGCCCATGCATTCCACTGTAAGGGATGGACATCTTTCCATAGACAccgttttgtatgttttattttatgcattattaGTCAGCCCATCACCTGCAGttactttgtgttttcagttcCTCAAACTAATTTGTTATTGCTTGTTTATGAACTGCAAATATTAATATGTCTAGAAAGTAGTCTTAGCTTTTTAGATGgcatatatatagttttatatattatttttgaaggGGAAATTCCACAGTGAGGGAGGAGTAATTTAAAACCTAACCCCTCTtgacccctctctctgtgtaatGTAGCTGTAGGTAATACTCTTAGGCACACATATGCCTAATCATCCCCATTCCCTGTGAATATAAATGACCTGTAGTCTGTCCCACAGAGAAAATAACAGTGAAAGGGTATGTGTGTTATATGGTATACTccactagttttttttttttaacctgttaaAACGTTTTGGGCTTTCTGGTGACCAACTATAAATGTACTGTTTCGGTAATGTTTTCGAAGCGGATCAGAGGATTTACTATCACATGTCTAGGTGTTTTGAAAGTTCCCGGGAAACAGATTGAtgtcctttatttatgtatatgcataCAGACACAACCTGTAAACAGTAAAACGATAAaactattataataaataccGGAGGGAAAACATTTATAGAACACTAACGGGGGAGAAAATATTCGCTACCCACGCttgtaaactgtattattgcTATTATGTACAGCATTCGAGGGATTTATTGTGCATAATTACTAGtactgaatctttttttttctaaccgTGTCTGTAGTGTGCTCTTTATAAACGGAAATGTACATTGAGACTTTTTTGccatctatttaaaataaactgtacatatatttttgttatatcaTGCATTGTACTATTTAAGAAGTGATTTTCGTATTTTCTGAGCTATTCGTTAATAAATCAAGTTTTGGACAatgatgacaaattaaaac

Function

GO:

id name namespace
GO:0006351 transcription, DNA-templated biological_process
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24385 MYNN; myoneurin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009094 True 3215 mRNA 0.45 8 24967917 24974656

Neighbor

gene id symbol gene type direction distance location
AMCG00009095 NA coding downstream 334 24963090 ~ 24967583 (-)
AMCG00009092 NA coding downstream 5990 24960593 ~ 24961927 (-)
AMCG00009091 NA coding downstream 25643 24934221 ~ 24942274 (-)
AMCG00009090 sec62,LOC107684396,LOC107738178,LOC107558802 coding downstream 34756 24921227 ~ 24933161 (-)
AMCG00009093 NA coding downstream 72517 24889931 ~ 24895400 (-)
AMCG00009099 NA coding upstream 141729 25116385 ~ 25143430 (-)
AMCG00009098 NA coding upstream 187929 25162585 ~ 25169182 (-)
AMCG00009102 NA coding upstream 320305 25294961 ~ 25301473 (-)
AMCG00009103 NA coding upstream 375863 25350519 ~ 25368414 (-)
AMCG00009101 NA coding upstream 430012 25404668 ~ 25422813 (-)
G54466 NA non-coding downstream 83192 24882039 ~ 24884725 (-)
G54450 NA non-coding downstream 120088 24813553 ~ 24847829 (-)
G54447 NA non-coding downstream 176654 24788395 ~ 24791263 (-)
G54408 NA non-coding downstream 257144 24627839 ~ 24710773 (-)
G54548 NA non-coding upstream 195575 25170231 ~ 25172840 (-)
G54561 NA non-coding upstream 309021 25283677 ~ 25284103 (-)
G54578 NA non-coding upstream 372556 25347212 ~ 25349010 (-)
G54594 NA non-coding upstream 504032 25478688 ~ 25478901 (-)
G54597 NA non-coding upstream 511414 25486070 ~ 25486488 (-)
AMCG00009060 hltf other downstream 1104882 23825229 ~ 23863035 (-)
G54003 LOC107575789 other downstream 2784352 22183088 ~ 22183565 (-)
G53809 NA other downstream 4696103 20179799 ~ 20271814 (-)
AMCG00009027 NA other downstream 4905738 20061524 ~ 20062179 (-)
AMCG00009029 NA other downstream 4997641 19961027 ~ 19970276 (-)
G54544 NA other upstream 178610 25153266 ~ 25156338 (-)
AMCG00009100 NA other upstream 199021 25173677 ~ 25176378 (-)
AMCG00009106 NA other upstream 485950 25460606 ~ 25462690 (-)
AMCG00009105 NA other upstream 555173 25529829 ~ 25531566 (-)
AMCG00009121 NA other upstream 1547977 26522633 ~ 26532410 (-)

Expression


Co-expression Network