Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009095 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 24963090 ~ 24967583 (-) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0046036 | CTP metabolic process | biological_process |
| GO:0046131 | pyrimidine ribonucleoside metabolic process | biological_process |
| GO:0046132 | pyrimidine ribonucleoside biosynthetic process | biological_process |
| GO:0046134 | pyrimidine nucleoside biosynthetic process | biological_process |
| GO:0009148 | pyrimidine nucleoside triphosphate biosynthetic process | biological_process |
| GO:0072528 | pyrimidine-containing compound biosynthetic process | biological_process |
| GO:0006221 | pyrimidine nucleotide biosynthetic process | biological_process |
| GO:0006241 | CTP biosynthetic process | biological_process |
| GO:0009208 | pyrimidine ribonucleoside triphosphate metabolic process | biological_process |
| GO:0009209 | pyrimidine ribonucleoside triphosphate biosynthetic process | biological_process |
| GO:0009218 | pyrimidine ribonucleotide metabolic process | biological_process |
| GO:0009220 | pyrimidine ribonucleotide biosynthetic process | biological_process |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009095 | True | 1242 | mRNA | 0.48 | 10 | 24963090 | 24967583 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009092 | NA | coding | downstream | 1163 | 24960593 ~ 24961927 (-) |
| AMCG00009091 | NA | coding | downstream | 20816 | 24934221 ~ 24942274 (-) |
| AMCG00009090 | sec62,LOC107684396,LOC107738178,LOC107558802 | coding | downstream | 29929 | 24921227 ~ 24933161 (-) |
| AMCG00009093 | NA | coding | downstream | 67690 | 24889931 ~ 24895400 (-) |
| AMCG00009086 | NA | coding | downstream | 157810 | 24792402 ~ 24805280 (-) |
| AMCG00009094 | NA | coding | upstream | 334 | 24967917 ~ 24974656 (-) |
| AMCG00009099 | NA | coding | upstream | 148802 | 25116385 ~ 25143430 (-) |
| AMCG00009098 | NA | coding | upstream | 195002 | 25162585 ~ 25169182 (-) |
| AMCG00009102 | NA | coding | upstream | 327378 | 25294961 ~ 25301473 (-) |
| AMCG00009103 | NA | coding | upstream | 382936 | 25350519 ~ 25368414 (-) |
| G54466 | NA | non-coding | downstream | 78365 | 24882039 ~ 24884725 (-) |
| G54450 | NA | non-coding | downstream | 115261 | 24813553 ~ 24847829 (-) |
| G54447 | NA | non-coding | downstream | 171827 | 24788395 ~ 24791263 (-) |
| G54408 | NA | non-coding | downstream | 252317 | 24627839 ~ 24710773 (-) |
| G54548 | NA | non-coding | upstream | 202648 | 25170231 ~ 25172840 (-) |
| G54561 | NA | non-coding | upstream | 316094 | 25283677 ~ 25284103 (-) |
| G54578 | NA | non-coding | upstream | 379629 | 25347212 ~ 25349010 (-) |
| G54594 | NA | non-coding | upstream | 511105 | 25478688 ~ 25478901 (-) |
| G54597 | NA | non-coding | upstream | 518487 | 25486070 ~ 25486488 (-) |
| AMCG00009060 | hltf | other | downstream | 1100055 | 23825229 ~ 23863035 (-) |
| G54003 | LOC107575789 | other | downstream | 2779525 | 22183088 ~ 22183565 (-) |
| G53809 | NA | other | downstream | 4691276 | 20179799 ~ 20271814 (-) |
| AMCG00009027 | NA | other | downstream | 4900911 | 20061524 ~ 20062179 (-) |
| AMCG00009029 | NA | other | downstream | 4992814 | 19961027 ~ 19970276 (-) |
| G54544 | NA | other | upstream | 185683 | 25153266 ~ 25156338 (-) |
| AMCG00009100 | NA | other | upstream | 206094 | 25173677 ~ 25176378 (-) |
| AMCG00009106 | NA | other | upstream | 493023 | 25460606 ~ 25462690 (-) |
| AMCG00009105 | NA | other | upstream | 562246 | 25529829 ~ 25531566 (-) |
| AMCG00009121 | NA | other | upstream | 1555050 | 26522633 ~ 26532410 (-) |
