AMCG00009098


Basic Information

Item Value
gene id AMCG00009098
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25162585 ~ 25169182 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009098
GTCTTGCTGCTCCTTTCCTAATTATAGGACCTGATTGGTCAGTTAAATGTGATAGCAGGAGCCAATCTTTTCACTGCTAGCAGCATGCGATTACCATGTGACttaccttttgtttttaattatcaagGTGCCATTTAAGATGTTGCAGTCTCTGACTCTGACACAGAAGTTCTGAGGGTAGCAGAAAGGCAGGGTGCACAGGGCTTAAGTCACAACACCTCAGAACAGATCCTTGAGGGCCAGGGGCTCTTCAAGCTGCTTCCTTCACCTACCAGTGGTCTGCAGAGCTGATGAGTGCCTAGTTTTCCTCACACAGtttgcTAGATTTCTGAAGAGTTGAAAACATGGCGCTGAGTGGAAGTAAACCATTATCATACATCTTTGCCGGAGTCTTGCTGGCAATCGTCTTATTACCTGACTTTCCTGAGGCAGGTCCAGTAGGACAGCGTCTTAAAGGAGATGaGGGAGACAAGGAGACAGTGAGTTTGGAGAAGGCTGAAGCCCCAGGAATGCTCAAAAAGCTGGTTCGTTCTAGGAGAAATATCAGCTGGTACAAACAACACTCTGATTTCTGGGGCTGGTACAAATACTTCACGGACACTGGAAACCAAGAAGGAGTTAACGAGCTGGACCGCGTCTACCTGCAGTATTTGCAGAACAAGAACCGGGCAGAAGGCCGTCGCTCTTATGACATGTATCTCCGCCACTTGGCTCAGGTGTACAAGGCCTGCTCCAATTCGGATGACCCTGAGTGCATTTCTGAGCTCACAAGTAAACCCAAACCCAAAACCAAAGCTGAGCCGTCGGcaccagccccagccccagccccagtaAAGGGATGTGACCCGTACAGAGATCCCTACTGCCAGGTGGCTCGTTCAGCCCCCAAAGCTCCCGTGATGGCCCCAGCACCCTTCAAAGCTCCCTCTCCTGGCTACTACTATTATGTCCCACCTCCCCAGCCATTCCTCTCAGCCAAGCAGAAAGCTGAGCTACTGCGCATCTGCAACCCAGCTGATGTTGAATGCCTGCAGTACCACTTGCGGGCTGCCTATGGGTACAAGCCTGCCCCAGCCACTGTGGCTGCCCCACCATCTTATGCCTACCTTGGATTCGACTCCAAGAAAGCCCCATTCTCCATGCCACAGAAGCCGAAGAAGGAGGTATACCACCACTACCCAAACTGTAACCCAGACTATGACCCTTACTGCACCCCAGAAACCCCCCAGGCCGTCCAGGCACCCTCCCAGGTGCAACCCTCCCGCTGCAACCCTCTCTTTGATGATAACTGCAACCCCCTATCGGCCGTCAAGATGGCTGGCTATACTGCCCCCCGTCCAAAAACAGAATGTGACCCCTACTATGACCCCAGCTGCCGGCAGGAGTACAGGCCCAAGGATGAGCCAGCTCCAGACACAGGCTGCGATCCTCGTTACGATCCTTACTGCACCCAGGGCTCCAGCAATGCCCACTCTGAGCCACAAGTTGATCCCTGGCGGTCACAACAGATCAAAGGCAAGACCAAGGAGGGCTATGACTGCTACGTTCACTATGATGAAGAGTGCTACCCGGTGCGCAGCTCCAGTCCCTCCCAAGCCAGTGCCACCAGTACCAGGCCTAACTGTGACCCCTATGACCCCAGCTGCCCACTCTACTACAGCGCCAACAACCCTATGAGGTCTGCTATTGAGAGCCCTCAGACCGACTGCCACCCATACGACCCCAGCTGCCGCAAACCCATCCCACAAGCCCCAAGTGCTCCCGAGAGCTACCACCCAGACCACAACCCCACAGGCCACCGAGATGGGGTGATTGAACCTGACCCCGACTGTGACCCCGAGTATGACCACAACTGTCGCCTCCGCCGCAGTGAGGCCCCTCAGGACAATATGAAGAGTGAGAACAAAGTGACAGAGGACAGCAAGAATGAGCCTACCCATCAAGAGGAACCATTTTATGACCCCAGAAGGGACGAGGGCCCCAGTTATGACCACCAACAATACGACCCCTACCAGGGCAGGCAAGAAGACCCTTACAATCCATATACTGGGTATGGCGGACAGGAACATCCTGAGCACAGGTATGATGAGGCCCAGAGAGGGTATGAAGACCAGTATCCCAGATATGATGAATCGCAAGGCCACTATCTGTCCACTGACCACGCCAGCGCTGGAGAATACAAGAAgtaaaaatacacagaagaaCAAACATGCTACACAAGTGAGCCAATGTaatctataaaacaaaacacaaacacaaaaacttcTGTATTTGGCATTGGTGCTATGATCTAGCCATGCCAGGGCACCTGATTAGGGTGTGACAGTGCTACCGTGCTTTGTTGAATTTGTGAGTTGATTATTTTCAGTTGCCTGAAGTTATAGAGTTACAGCTTGATATGGGTATCTGCCCACACATGATGAACATTCTTATAGGGTTTATGGTTACACAAAATGtctgtgttaaatgtgtttgtctatgtctgcatttaaaatcaagtcCTTAGTTAAGAGCCTTTGTATTTTTTGATGTTATGGGTAGTGTACTTGAATTTGGTTTGGCCTTACATTTCTCTCTACAATGTATTTTCCTCTTGGTTtattcttcactttttttttattgatggtACATCTCTCCAAGAATATTTAATAACTTTCACAGCTTTgcttatttttgcatttacaaCCTCATTTTGTAATGGTGTAAGATGTTGTGTTTAATGttccaaa

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process
GO:0048856 anatomical structure development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009098 True 2729 mRNA 0.50 5 25162585 25169182

Neighbor

gene id symbol gene type direction distance location
AMCG00009099 NA coding downstream 19155 25116385 ~ 25143430 (-)
AMCG00009094 NA coding downstream 187929 24967917 ~ 24974656 (-)
AMCG00009095 NA coding downstream 195002 24963090 ~ 24967583 (-)
AMCG00009092 NA coding downstream 200658 24960593 ~ 24961927 (-)
AMCG00009091 NA coding downstream 220311 24934221 ~ 24942274 (-)
AMCG00009102 NA coding upstream 125779 25294961 ~ 25301473 (-)
AMCG00009103 NA coding upstream 181337 25350519 ~ 25368414 (-)
AMCG00009101 NA coding upstream 235486 25404668 ~ 25422813 (-)
AMCG00009112 uggt1,LOC107748935,LOC107683622,LOC107727334 coding upstream 718229 25887411 ~ 25931495 (-)
AMCG00009113 hs6st1a,LOC107678693,LOC107727332 coding upstream 772943 25942125 ~ 25950002 (-)
G54466 NA non-coding downstream 277860 24882039 ~ 24884725 (-)
G54450 NA non-coding downstream 314756 24813553 ~ 24847829 (-)
G54447 NA non-coding downstream 371322 24788395 ~ 24791263 (-)
G54408 NA non-coding downstream 451812 24627839 ~ 24710773 (-)
G54548 NA non-coding upstream 1049 25170231 ~ 25172840 (-)
G54561 NA non-coding upstream 114495 25283677 ~ 25284103 (-)
G54578 NA non-coding upstream 178030 25347212 ~ 25349010 (-)
G54594 NA non-coding upstream 309506 25478688 ~ 25478901 (-)
G54597 NA non-coding upstream 316888 25486070 ~ 25486488 (-)
G54544 NA other downstream 6247 25153266 ~ 25156338 (-)
AMCG00009060 hltf other downstream 1299550 23825229 ~ 23863035 (-)
G54003 LOC107575789 other downstream 2979020 22183088 ~ 22183565 (-)
G53809 NA other downstream 4890771 20179799 ~ 20271814 (-)
AMCG00009027 NA other downstream 5100406 20061524 ~ 20062179 (-)
AMCG00009100 NA other upstream 4495 25173677 ~ 25176378 (-)
AMCG00009106 NA other upstream 291424 25460606 ~ 25462690 (-)
AMCG00009105 NA other upstream 360647 25529829 ~ 25531566 (-)
AMCG00009121 NA other upstream 1353451 26522633 ~ 26532410 (-)
G54821 NA other upstream 1624359 26793541 ~ 26796654 (-)

Expression


Co-expression Network