AMCG00009100


Basic Information

Item Value
gene id AMCG00009100
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25173677 ~ 25176378 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009100
cgtgagaaaaaaaagaaaaaaagtgacgtttcattcctttattttatgtCCAGCTTTAAAACTTGCCTGCACTGAACACAGTAATCCATTCAGCTCTTCAGAATTGCATTGATATTAATTTCCTTCAATTTAGAAGGCAGAAACACAGGAAGGATGAAgtgttacttcttcattggAATATTCTTCGTCTGCTTTTTGGTAAATCAATTAACTGaTGCTGCAGTTATCCGAGAAGGAGTTCCCTACGATGAAGTGCCTGCGCCACCATATTGGCCATACAGTACCACAGATTTCTGGCATTACGTGGAGTATTTCCGCACCATTGGGGCCTACAACCGAATTGAGGAGCTGGCCCGGACGTTTTTTGCTCATCAGCACCTGGGAGACACTTTGGGCTACGATGCACCACAACACgagcattaaaaaacaatctgttaaGCAGAGAAGCATTCTTAGAATAGAATTGCAGTTGTTGTGTAGGATTAGAACAAGTGTATACAGCTATTCTGCATCTCCATTGTATGTATCTATGTTTGCATATTATTAAACTGTTATCGAATGCAGGAGCATGGCCTCCAATGTAACATGGTAGTAATTTGAGTTTGCAGTATTAATAAagtttgggggaaaaaaa
>TU68195
GGCTATTCGCAGCAACTTTTGTtatatacttgtatatataactaatatttttaaaactttaagaAAACCACAGATGAAGTGAAGGGGGAGGAGGACAACAGcgtgagaaaaaaaagaaaaaaagtgacgtttcattcctttattttatgtCCAGCTTTAAAACTTGCCTGCACTGAACACAGTAATCCATTCAGCTCTTCAGAATTGCATTGATATTAATTTCCTTCAATTTAGAAGGCAGAAACACAGGAAGGATGAAgtgttacttcttcattggAATATTCTTCGTCTGCTTTTTGGTAAATCAATTAACTGaTGCTGCAGTTATCCGAGAAGGAGTTCCCTACGATGAAGTGCCTGCGCCACCATATTGGCCATACAGTACCACAGATTTCTGGCATTACGTGGAGTATTTCCGCACCATTGGGGCCTACAACCGAATTGAGGAGCTGGCCCGGACGTTTTTTGCTCATCAGCACCTGGGAGACACTTTGGGCTACGATGCACCACAACACgagcattaaaaaacaatctgttaaGCAGAGAAGCATTCTTAGAATAGAATTGCAGTTGTTGTGTAGGATTAGAACAAGTGTATACAGCTATTCTGCATCTCCATTGTATGTATCTATGTTTGCATATTATTAAACTGTTATCGAATGCAGGAGCATGGCCTCCAATGTAACATGGTAGTAATTTGAGTTTGCAGTATTAATAAagtttgggggaaaaaaatgcttttgttttatcaaCAAACGcttgtgtttatgtttaaattTGGGACCTATGAAAACATAACAGTTGGGTGGTCATAATAGCCACCATTACCCAATTGCATAAATGTGTCACAATAGTCATATGACACACAACCAGAATGCAACAATTTATagatgttaaat

Function

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009100 False 634 mRNA 0.40 4 25173841 25176277
TU68195 True 899 TUCP 0.38 4 25173677 25176378

Neighbor

gene id symbol gene type direction distance location
AMCG00009098 NA coding downstream 4495 25162585 ~ 25169182 (-)
AMCG00009099 NA coding downstream 30247 25116385 ~ 25143430 (-)
AMCG00009094 NA coding downstream 199021 24967917 ~ 24974656 (-)
AMCG00009095 NA coding downstream 206094 24963090 ~ 24967583 (-)
AMCG00009092 NA coding downstream 211750 24960593 ~ 24961927 (-)
AMCG00009102 NA coding upstream 118583 25294961 ~ 25301473 (-)
AMCG00009103 NA coding upstream 174141 25350519 ~ 25368414 (-)
AMCG00009101 NA coding upstream 228290 25404668 ~ 25422813 (-)
AMCG00009112 uggt1,LOC107748935,LOC107683622,LOC107727334 coding upstream 711033 25887411 ~ 25931495 (-)
AMCG00009113 hs6st1a,LOC107678693,LOC107727332 coding upstream 765747 25942125 ~ 25950002 (-)
G54548 NA non-coding downstream 837 25170231 ~ 25172840 (-)
G54466 NA non-coding downstream 288952 24882039 ~ 24884725 (-)
G54450 NA non-coding downstream 325848 24813553 ~ 24847829 (-)
G54447 NA non-coding downstream 382414 24788395 ~ 24791263 (-)
G54408 NA non-coding downstream 462904 24627839 ~ 24710773 (-)
G54561 NA non-coding upstream 107299 25283677 ~ 25284103 (-)
G54578 NA non-coding upstream 170834 25347212 ~ 25349010 (-)
G54594 NA non-coding upstream 302310 25478688 ~ 25478901 (-)
G54597 NA non-coding upstream 309692 25486070 ~ 25486488 (-)
G54598 NA non-coding upstream 310599 25486977 ~ 25488628 (-)
G54544 NA other downstream 17339 25153266 ~ 25156338 (-)
AMCG00009060 hltf other downstream 1310642 23825229 ~ 23863035 (-)
G54003 LOC107575789 other downstream 2990112 22183088 ~ 22183565 (-)
G53809 NA other downstream 4901863 20179799 ~ 20271814 (-)
AMCG00009027 NA other downstream 5111498 20061524 ~ 20062179 (-)
AMCG00009106 NA other upstream 284228 25460606 ~ 25462690 (-)
AMCG00009105 NA other upstream 353451 25529829 ~ 25531566 (-)
AMCG00009121 NA other upstream 1346255 26522633 ~ 26532410 (-)
G54821 NA other upstream 1617163 26793541 ~ 26796654 (-)
AMCG00009148 NA other upstream 1934618 27110996 ~ 27153475 (-)

Expression


Co-expression Network