AMCG00009103


Basic Information

Item Value
gene id AMCG00009103
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25350519 ~ 25368414 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009103
AAGCTGGGCAGTAGCATGCAGTCAGATGAGGGGACGGAGTGGCTCCTGGAACTCTTGATGGAAGTACAGCTACAGCAGTATTTCCTAAGAGTCCGCGATGACCTCAATGTCACCCGCCTCTCTCACTTCGACTACGTAAAAAATGAAGACCTGGAGAAGATCGGCATGGGGCGGCCAGGCCAGAGACGGTTGTGGGAAGCTGTCAAAAGAAGGAAAGCATTGTGCAAACGCAAGTCCTGGATGAGCAAGGTGTTCAGTGGGAAGAGGCCCGATGCGGAGTTCCAGCCTCAGCCAGCCACCACCTTCCGCAAGGTGTCCACACCGCCCCCTCCAGAGGGCCAACAGGCACTCACCTGCCTGATCAGTGAGAAGGACCTATCTCTTTTCGAGAAGCTGGGTGATGGCTCCTTTGGAGTGGTCAAGCGTGGGGAGTGGCTCACTCCAACAGGGAAAGTGATCAAtgttgctgtgaaatgtctgaaaaCTGATGTACTCAACCAACCTGACGCTTTGGATGACTTCATAAGGGAAGTGAATGCCATGCACTCCCTGGACCATCAGAACCTGATCCGGCTGTATGGTGTTGTTCTCACACACCCCATGAAAATGATAGCCAACGGCATGGCCTACCTGGAATCCAAGCGCTTCATTCACCGAGACCTTGCTGCCCGCAACATCCTGCTAGCCGCCAATGACCTGGTGAAGATTGGGGACTTTGGACTGATGAGGGCCCTGCCAAAGAACGACGACCACTACGTCATGCAGGAGCACCGGAAGGTCCCCTTTGCCTGTGACACCTGGATGTTTGGTGTGACCCTGTGGGAGATGTTTACATATGGACAAGAGCCCTGGCTGGGACTCAATGGCAGCCAGATTCTTCATAAGATTGATAAGGAAGGGGAGAGGCTGCCCAAGCCCGAGGACTGTCCTCAGGATATCTACAACGTCATGCTGCAGTGCTGGGCACAGAAGCCTGATGACAGGCCCACGTTTGTGGCTCTACGGGAGTTCCTGGTGGAGACAATGCCAACTGATATGCGGGCCCTGCAAGATTTTGAGGAGCCGGACAAGCTGCTGATTCAAATGAATGATGTAATCACCATCATTGAAGGCAGGGCTGAAAACTACTGGTGGAGGGGGCAAAATAAGAGTACTCTGAAGGTTGGCCAGTTTCCCAGAAACACTGTGACGTCTGTGGCCGGCCTGTCAGCCCACGACATTAGCCGACCGCTGAAAAACAGCTTCATCCACACAGGACACGGAGACAGCAACCCTCATCGCTGCTGGGGCTTCCCTGACAAAATTGACGATCTTTATCTGGGCAATCCAATGGATCCCCCTGATGTTCTAGGAATGGATCTAAATGCTGCCAGACCCACTCAGCTACCTGGACGGGCTAAAAAGGAGCCCCCACCTCGCCCCCCCCAACCAGCGATTCTTGTCAAGAAGCCCTGTTATGATCCTGTTACTGAGGATGAGGATCTCACAGCTGCTGGCCTGAAGAAACTTTCTCTTAAAAAGCAGGGAACAGTCAAAGGGTTGAAACTCGTCAAACCTGCCGCCTGGGTCTCTGCCACAAAGATGGGGGACCGGCAGGGTGGGGGAGGTAGGACAGTGGGGTTTGTCCCTAATGAGGTGTCCTTGATTGACTTTGGAGAGGAAATCCCCCCATCTACTCCATCTCCTGTTGTGGAAATCCAGATACCCACACTAGCAAAACTGGCACTAGAGGCTGACTCCATATTAGACAAAACCCCTCCGCAAAGTCCCACACGAGTCCTGCCCCGACCCCTGTACCCGACTCCTGTGGTCGACTGGGACTCCAAGCCCCTGCCTCCACCTCCAGCCTATGACGACGTAGCTCAGGACGAGGAAGATATTGAGGTGTCTTCCATTAACAGTTCTGAGCCTGGTCTGCTGGACGTGCAGGGCAAATATGCAGTGGTCAATGTTCAGAAGGTCAAAGAAAAGGGAGAGCCTAACATGGGCTTCTCTCAAGACACTGACTCTGGTGAGAAGCCCAAAGTGGAGGACAACCTGTTTCTGCCTAGTAGGCAGAGCCGGCAGAACAACTTCTCGCAGTCGGCAGAGATCTTCGAGGAGCTGCAGCAGGAGTGCATGAAGAGGCTGAACGTACCCGCGGTATCCTCCTTGCCCTCCTCCCCCAGCCCGACGAACCTCGATATGCACAAGCAGattgttctctctttctctgacgACAAGCCCCAGATCCCCCCAAGGATCCCCATCCCACCGCGACCTGTCAAGCGAAACGATTACGGACGCAGGTCTGGGGATCTGTCTCCAACCTCCGGAGGGGAGGAGGACAAAGACCACCCTCCGCAAATACCTCCCAGGGATCCCTTATCCCAGCCAAGTTCCAGAACTCCCAGCCCCATGAGCTTGCATGTGGGCTCCCCTCAGCAAAGGAGCAGCCTGTGCTCAACAGTGTCCTTCGGGTCCTACCTGTCCACCTCCCCTGGAAAGCTAATGCCCACAACCCAGAGCTTTGCGTCAGACCCCAAGTATGCCACCCCCAAAGTCATCCAAGCTCAGGGGAAAGACTGCACAAAGGGCCCATGCATCTTGCCCATTGTGAAAGACGGAAAAAAAGTGAGCAGCACTCACTACTACCTCCTCCCTGAGAGGCCCCACTACCTGGACAAATACGAGAAGTTCTTTAAGGAGGCTGAGAGCCCCGAGGACAATTCCTCCAAGCGCACGGTGACCACGGCCACTGTGCGACCCATGATGCAACAACAGACGGACTTCAAAGCCAACTTCTCCTCTAACAACAGCAACCCCGGGGTCAAGACTGCAATAAAGGCATCCTACAGCCTGCAGAGGGTGAGCTGTGATGGACCGGCTGTGAAAGCAGATGGAGCCAGGTCTTCTGATAAAGTCAATTTAgTGCAGGAGGCAGTCCATGGGGTGACAATTGAAGAATGCCAGACTGCTCTCCAGAATCATGGCTGGAATATCCAGAAAGCAGTGCACTATCTCAAGGTCGAGCAGCTGTTTTGCCTGGGACTGAAGACGAGAGCAGAATGTCTTAAAATATTAGAGATGTATGACTGGAATCTGGAGTTGGCTAGCTCCCAACTGCTTGACTCCTATGGCACAGTCAGACAAAGgCGATGACTGCCATCACTTTGGGGATGCTGGCTCCTCAAACTTTCCAGTTGTCTTTTTGCACCACTGATTTTAGTCCACCCTTTCTGTGTACGGAGAAACTGCTGCTTCATTTAGAGTGGAATCAGAACATTCTTAAATGGATACACTTTTGTCATCTGCTCTATTGACCCTCATTGTACACAACTGCATTTCAGCCCAGAGGTCAAATTTCAACCAatccagtatttatttttctgaaaaaaaaaacaagaaagaaaggagagaaaaaaaaaactgattggCTGGGGTAAAGTGTATCTGTCCTTCTTAACAGTGTCCTTTATCTGGCCAGTGCTCTATCGTTTCATTCAGagtatatataaagagaa

Function

GO: NA

KEGG:

id description
K08886 TNK2, ACK1; activated CDC42 kinase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009103 True 3503 mRNA 0.52 15 25350519 25368414
Loading

Neighbor

gene id symbol gene type direction distance location
AMCG00009102 NA coding downstream 49046 25294961 ~ 25301473 (-)
AMCG00009098 NA coding downstream 181337 25162585 ~ 25169182 (-)
AMCG00009099 NA coding downstream 207089 25116385 ~ 25143430 (-)
AMCG00009094 NA coding downstream 375863 24967917 ~ 24974656 (-)
AMCG00009095 NA coding downstream 382936 24963090 ~ 24967583 (-)
AMCG00009101 NA coding upstream 36254 25404668 ~ 25422813 (-)
AMCG00009112 uggt1,LOC107748935,LOC107683622,LOC107727334 coding upstream 518997 25887411 ~ 25931495 (-)
AMCG00009113 hs6st1a,LOC107678693,LOC107727332 coding upstream 573711 25942125 ~ 25950002 (-)
AMCG00009114 hs6st1,hs6st1a,LOC107602601,LOC107588870,LOC107727332,LOC107748934,LOC107678693 coding upstream 691127 26059541 ~ 26060656 (-)
AMCG00009118 NA coding upstream 1106265 26474679 ~ 26483701 (-)
G54578 NA non-coding downstream 1509 25347212 ~ 25349010 (-)
G54561 NA non-coding downstream 66416 25283677 ~ 25284103 (-)
G54548 NA non-coding downstream 177679 25170231 ~ 25172840 (-)
G54466 NA non-coding downstream 465794 24882039 ~ 24884725 (-)
G54450 NA non-coding downstream 502690 24813553 ~ 24847829 (-)
G54594 NA non-coding upstream 110274 25478688 ~ 25478901 (-)
G54597 NA non-coding upstream 117656 25486070 ~ 25486488 (-)
G54598 NA non-coding upstream 118563 25486977 ~ 25488628 (-)
G54610 NA non-coding upstream 144419 25512833 ~ 25515018 (-)
G54613 NA non-coding upstream 153707 25522121 ~ 25524025 (-)
AMCG00009100 NA other downstream 174141 25173677 ~ 25176378 (-)
G54544 NA other downstream 194181 25153266 ~ 25156338 (-)
AMCG00009060 hltf other downstream 1487484 23825229 ~ 23863035 (-)
G54003 LOC107575789 other downstream 3166954 22183088 ~ 22183565 (-)
G53809 NA other downstream 5078705 20179799 ~ 20271814 (-)
AMCG00009106 NA other upstream 92192 25460606 ~ 25462690 (-)
AMCG00009105 NA other upstream 161415 25529829 ~ 25531566 (-)
AMCG00009121 NA other upstream 1154219 26522633 ~ 26532410 (-)
G54821 NA other upstream 1425127 26793541 ~ 26796654 (-)
AMCG00009148 NA other upstream 1742582 27110996 ~ 27153475 (-)

Expression

AMCG00009103 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 8.
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AMCG00009103 Expression in each Bioproject

Bar chart with 7 bars.
AMCG00009103 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 25.
End of interactive chart.

Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000003_00842413_00868623 TNK2 coding CI01000003 null 842413 ~ 868663 (+)