AMCG00009106


Basic Information

Item Value
gene id AMCG00009106
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 25460606 ~ 25462690 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009106
CTCTTATTATAGCAAGAGTCAAATTGTTCACTCCGTAAAACTCAATACAATGGCTGTCAAGTTCTTCTGTCTGGCGCTGCTGGGACTTGTGGCTCtgagtttgtttgctttgcagACCGAAGcagGTCCGGGGAGTTGTTGCCTCTCGTATTCAAAGAATCGCTTGCCGTGCAAAGTCATCAAGGGCTACACGATCCAGTCTGTGAAGGATAACTGCAACATTGACGCGATTTTGTTCCACACAAATGGGGGCAAAACCCTCTGCCATGACCCCTCAAAAGCCTGGGTAATGGAGAGAATTCACTGCCTGAAaaaaaaggcagagaaCATGGCTTGATAAAATCCTGGCACACGAAACACAATGGTGTTATGGAATTCATGTTAATGATGTCAAATTTTCAGATACataatttgttgtgttttagtCTACCTTTATTATTAgacctatatgtatatatgtgtatgtgtatttaatgctttatacatggttatttatttcagttatttaattatttaaagttagATATTATTTTGATGGGGAAAATGAATGGTCTTATCTGGTATCATGCCATGAAGCaatgataaattattattgaaatgtttttcattgtataCTTATTCATATCTACTATGAAAGTCTAAATTGATGTTCTGTTTTATAAATAGGACTTAAGTAAAGTATCAATGTTAAGATACTATAATGATTTATACAACAAACgttaaacatttttatgttgtaataggtattgcaaaatatttttgcattatttcatttcaatagcaaCTGAGATGCATCTGTAAATGGAATTATGTTCAAAGTATGGAGTTCTTATAGAATTCATTATATAACCATTCTGTTATATTTAAGCATGTATAACATGTATCCTTATTTGATACTacaagttacaaaaaaaataaaaactccgC
>TU68245
CTCACAATGCATAACAACACTTGAAGATTAAAGACCTCTTATTATAGCAAGAGTCAAATTGTTCACTCCGTAAAACTCAATACAATGGCTGTCAAGTTCTTCTGTCTGGCGCTGCTGGGACTTGTGGCTCtgagtttgtttgctttgcagACCGAAGcagGTCCGGGGAGTTGTTGCCTCTCGTATTCAAAGAATCGCTTGCCGTGCAAAGTCATCAAGGGCTACACGATCCAGTCTGTGAAGGATAACTGCAACATTGACGCGATTTTGTTCCACACAAATGGGGGCAAAACCCTCTGCCATGACCCCTCAAAAGCCTGGGTAATGGAGAGAATTCACTGCCTGAAaaaaaaggcagagaaCATGGCTTGATAAAATCCTGGCACACGAAACACAATGGTGTTATGGAATTCATGTTAATGATGTCAAATTTTCAGATACataatttgttgtgttttagtCTACCTTTATTATTAgacctatatgtatatatgtgtatgtgtatttaatgctttatacatggttatttatttcagttatttaattatttaaagttagATATTATTTTGATGGGGAAAATGAATGGTCTTATCTGGTATCATGCCATGAAGCaatgataaattattattgaaatgtttttcattgtataCTTATTCATATCTACTATGAAAGTCTAAATTGATGTTCTGTTTTATAAATAGGACTTAAGTAAAGTATCAATGTTAAGATACTATAATGATTTATACAACAAACgttaaacatttttatgttgtaataggtattgcaaaatatttttgcattatttcatttcaatagcaaCTGAGATGCATCTGTAAATGGAATTATGTTCAAAGTATGGAGTTCTTATAGAATTCATTATATAACCATTCTGTTATATTTAAGCATGTATAACATGTATCCTTATTTGATACTacaagttacaaaaaaaataaaaactccgCTAAAAATATGCTA

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005125 cytokine activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009106 False 927 mRNA 0.33 4 25460619 25462655
TU68245 True 975 lncRNA 0.33 4 25460606 25462690

Neighbor

gene id symbol gene type direction distance location
AMCG00009101 NA coding downstream 37793 25404668 ~ 25422813 (-)
AMCG00009103 NA coding downstream 92192 25350519 ~ 25368414 (-)
AMCG00009102 NA coding downstream 159133 25294961 ~ 25301473 (-)
AMCG00009098 NA coding downstream 291424 25162585 ~ 25169182 (-)
AMCG00009099 NA coding downstream 317176 25116385 ~ 25143430 (-)
AMCG00009112 uggt1,LOC107748935,LOC107683622,LOC107727334 coding upstream 424721 25887411 ~ 25931495 (-)
AMCG00009113 hs6st1a,LOC107678693,LOC107727332 coding upstream 479435 25942125 ~ 25950002 (-)
AMCG00009114 hs6st1,hs6st1a,LOC107602601,LOC107588870,LOC107727332,LOC107748934,LOC107678693 coding upstream 596851 26059541 ~ 26060656 (-)
AMCG00009118 NA coding upstream 1011989 26474679 ~ 26483701 (-)
AMCG00009120 NA coding upstream 1028187 26490877 ~ 26494273 (-)
G54578 NA non-coding downstream 111596 25347212 ~ 25349010 (-)
G54561 NA non-coding downstream 176503 25283677 ~ 25284103 (-)
G54548 NA non-coding downstream 287766 25170231 ~ 25172840 (-)
G54466 NA non-coding downstream 575881 24882039 ~ 24884725 (-)
G54450 NA non-coding downstream 612777 24813553 ~ 24847829 (-)
G54594 NA non-coding upstream 15998 25478688 ~ 25478901 (-)
G54597 NA non-coding upstream 23380 25486070 ~ 25486488 (-)
G54598 NA non-coding upstream 24287 25486977 ~ 25488628 (-)
G54610 NA non-coding upstream 50143 25512833 ~ 25515018 (-)
G54613 NA non-coding upstream 59431 25522121 ~ 25524025 (-)
AMCG00009100 NA other downstream 284228 25173677 ~ 25176378 (-)
G54544 NA other downstream 304268 25153266 ~ 25156338 (-)
AMCG00009060 hltf other downstream 1597571 23825229 ~ 23863035 (-)
G54003 LOC107575789 other downstream 3277041 22183088 ~ 22183565 (-)
G53809 NA other downstream 5188792 20179799 ~ 20271814 (-)
AMCG00009105 NA other upstream 67139 25529829 ~ 25531566 (-)
AMCG00009121 NA other upstream 1059943 26522633 ~ 26532410 (-)
G54821 NA other upstream 1330851 26793541 ~ 26796654 (-)
AMCG00009148 NA other upstream 1648306 27110996 ~ 27153475 (-)
AMCG00009151 NA other upstream 1851627 27314317 ~ 27335731 (-)

Expression


Co-expression Network