AMCG00009127


Basic Information

Item Value
gene id AMCG00009127
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26774549 ~ 26777467 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009127
ATGGAGCCGACAGAGAGCCCCCCAAAAAGCAGCTTGCAGCTCCCCAAGGATCAGATCAGCCCCACTGTGGATGTCAAATCTGGTGAGGATGTCCAATGCCTGCAGGTGAGCTCTGTGGCGTGTAATGAAGCCAGCAGCAGAGGGGGAGAAGACAACAGCAAGGAGGGTTCCTCTGGAGTTCCCACCAGTGATTGCGGCCAGGGCTGGGGTCATAGCCAATCTGTAAGGAAAAGCAAGACCCATGACTGTGTTGTGAGCATGGGGCTACAGCCAATGCCAGACAGTGGGAGCTCTGGGGAAAGCTTGTCACCCTCTGCCCAGAGGAGGGGAAGGCTGGTGAGCAGTGTGAGCTTTTCTGGGTTTGGGATCTCCTCTGATGGTTATGGCAGACTGATGCAAGAAAACCGTGGTGTCTCAGGTTATGGCCGGCAAATCATCGACTACAGGGACTTTACTCCTCAAGTGCCCTTCGTACCGTCCATTGCCAAGTCTATTCCCAGGAAGAGGATCTCACTGAGGAAGCCCAGGAAGGCTTTCAGAGACTTGTTTGGGATGAAGAGGCACAAGCATGAGAAGGCAGCCTCTCCTGTGCCCTTAGATCATGGCCCTGGAGGAAAGGAAACTGCTTCAAAAGAGTCTAGGAAATCCTCGAAACATAGGGAGCGATCTACTGGGAATCCTGTGCCACCAGAGCTCTCCAATAGCGATCTTCTGTCAGACTCTTCTAACGAGTGCTATGGCAATTTCTGTGAAGATGTGGCTTCCCTGAAAAGCTTTGACTCCCAGGCAGGGTGTGGGGAAATATTTGCAGATGAGGAGCAGCACATCTCTCTGGGGATTGAGCGGAGACAGGACCCGGACAAGGATGTGTGCGAACCAAGAAAGCCCAGCCCAGTGGGGGGGTCCTTCCAGGGTGGTGTGGAGCAGCTGGCATCTCCCCATCAAACAGAGGTGATGGATTTCCTGGGAATATGGGATGGCTTGGGCAGAACAGTCCTGTTACGCCAGAATTCTAGAACTGAAAGAAAGGTGTTGAGTACACAAAGCCCTACCCAAAACCAGCCAGCCAGTCAAAACCTAGGTGCATCCCCTAGCAGCCTCCCCACTCCTGCTGAAGAGGAGATGACAGTGGATTTAAATGCAGATGTGACGACACCAAAGAGTGAAAATCAGTCGGTCTCCACAAGTGATGAGGGCTATTATGATTCATTCAGCCCTGGTCAAGAGGACAACAGCAGGGGATCCATCACACCCTGTGGCTCCAGCAGGTTTCCCAGAGATAGCTACAGTGGTGATGCACTATATGAGCTCTTCTATGACCCCAATGAGACTGGGATTACTCCGATCTTTGACGATGACATGAGCCTATCCGAGAGTGATTTAGGTCAGTCTAGTGACCTTCCACTGTCCATGTACAGCTTCCATGTTGGTGCTGAGGAAAACCTTGCTCCCCCACTGGCTCTGGACGTAATTGGCCAGGAACTCCTGCAGAGCAACTGGAAGGGCAAGGAGTGCCTGTTAAAATTGTGCGACACTGAAATCTCTCTGGCGATGGGCATTGTGAACTGGCTCAAGCACAGAACTGAGAAGCTTAGCCCATCAGAGGCAGTGTGTAATGGGACGGAGCAACAGAGAAATAGTGGGTGTCTGAATGGAGAGGTAATTTCTCCAGTAATGCGGAAGGTGCCAAGAAAGCACACGTGGAGTGAGCACAGTGATTCATCGAAACATCTTTCTAAAGAGAGACCAGTCTGCTCACAAAATGGGACTCCTGTGTCTGGAGTTGTTCCCTTCCAACTCAGTAAAGACAGATTTGTCTCTGCTTTATCTGAATGTAATGCTTCTAATGGACATGGAGAAGCCAAGTTCAAAACTGCCACTAATGTTCCAGTTGACCTCAAGGGGACCCACAATGCATTGCCACTGGGGATCTTTGAATCTCCCATCAGCCCATCAAGAGGAGGAGGTGACCTTAACCTAATGAACCTCTTGGAGCAATGTGTAGGCCAGGTATCTTCTCTGAAGATCAATGGTAGTGTGACCCAGGAGCTGAAGGACAGCGAGCCATTCTTCCTACAGTTTGACCAGAACACCAGTggcaagaaagagaaagacctgattttagaaaatgaaaaagatcaGATCCACAGATTTTTAAAACCCAAGAAAAACCAGACACCAAGAAGTATGGACAAGAGAAGACAAGACACCAGTTGTCACAGTCAGACAAAGGGAAGTACAGAGAAAGACACTGGCACCTTGCAACCGGAACAAAGCAACGTTCAAGACTTACTTCCTCAACAGGAGGGTGGTGGATTGGAAATTGGGCTGGTCACAACAAACAGCTCAGATGAGCTTGTTCTGGAAACATACTGGAGTCCTTCATCAGACAAATCTAGGTCTGATTTCCTTGGTGACACATATGAAGACCAGCCACTCAGGCCCacattcctccctctctccaatTCTGCCTTCTCTGAGTTCACCAGCAGCCAGAAACACACAACAGGGCAGCATGGGGATGGAAACAGCAAGGGGCAACAACTCGAAAAAGTAAGACGACACCGGAAGTTGACAGTAAACCGGGATGGCCCGTGTGGATATGTGATGgcagaagagaagaaagaagaatGGAAAAGGAGGATAAAGAAGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009127 True 2655 mRNA 0.50 2 26774549 26777467

Neighbor

gene id symbol gene type direction distance location
AMCG00009126 arhgef4,LOC108432112,LOC107700563 coding downstream 101310 26655165 ~ 26673239 (-)
AMCG00009125 fbxo45,LOC106590630,LOC106578473 coding downstream 139185 26630612 ~ 26635364 (-)
AMCG00009124 NA coding downstream 149606 26615929 ~ 26624943 (-)
AMCG00009119 NA coding downstream 254415 26514126 ~ 26520134 (-)
AMCG00009120 NA coding downstream 280276 26490877 ~ 26494273 (-)
AMCG00009131 NA coding upstream 9551 26787018 ~ 26788465 (-)
AMCG00009137 NA coding upstream 11411 26788878 ~ 26789631 (-)
AMCG00009136 NA coding upstream 33428 26810895 ~ 26814469 (-)
AMCG00009132 NA coding upstream 46059 26823526 ~ 26827014 (-)
AMCG00009134 NA coding upstream 58061 26835528 ~ 26839792 (-)
G54797 NA non-coding downstream 95961 26678250 ~ 26678588 (-)
G54792 NA non-coding downstream 124556 26626806 ~ 26649993 (-)
G54706 NA non-coding downstream 366685 26407583 ~ 26407864 (-)
G54697 NA non-coding downstream 523692 26250546 ~ 26250857 (-)
G54682 NA non-coding downstream 683764 26090379 ~ 26090785 (-)
G54841 NA non-coding upstream 71746 26849213 ~ 26852408 (-)
G54886 psmd2,LOC107579021 non-coding upstream 200640 26978107 ~ 26979245 (-)
G54911 NA non-coding upstream 249072 27026539 ~ 27033024 (-)
G54914 NA non-coding upstream 255685 27033152 ~ 27034216 (-)
G54978 NA non-coding upstream 643351 27420818 ~ 27422678 (-)
AMCG00009121 NA other downstream 242139 26522633 ~ 26532410 (-)
AMCG00009105 NA other downstream 1242983 25529829 ~ 25531566 (-)
AMCG00009106 NA other downstream 1311859 25460606 ~ 25462690 (-)
AMCG00009100 NA other downstream 1598171 25173677 ~ 25176378 (-)
G54544 NA other downstream 1618211 25153266 ~ 25156338 (-)
G54821 NA other upstream 16074 26793541 ~ 26796654 (-)
AMCG00009148 NA other upstream 333529 27110996 ~ 27153475 (-)
AMCG00009151 NA other upstream 536850 27314317 ~ 27335731 (-)
AMCG00009165 rpl35a,LOC106612432 other upstream 836131 27613598 ~ 27618172 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 1607616 28385083 ~ 28390096 (-)

Expression


Co-expression Network