AMCG00009131


Basic Information

Item Value
gene id AMCG00009131
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26787018 ~ 26788465 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009131
gtaaagtaagaatgctttcaaaaataaacatattaatagattatatgtatcaatttacaaaatgcaaagtgagtgaacagaagaaaaatctacagcAGATCAATATTtgttgtgaccaccctttgccttcaaaacagcatcaattcttctaggtacccttgcacacagtttttgaaggaactcggcaggtaggtcggccAAAACATATtgggagaactaaccacagttcttctgtggatttaggcagcctcagttgcttctctctcttcatgtaatcacAGTCAGACTCAATggtgttgagatcagggctctgtgggggccataacatcacttccaggactccttgttctcaAGGACATAATTGTGTAATGTTGCACCTTTTCTCATGCTCTCAAGGACATAACACCGCAGCCTGGGCCTCAAATCTGGTTGCGTCCGACTACAAGCTGGTGTGTCCCAGTCATCCCAAATCATCTGTAGATGTAAGCCAGTACAAAGAATGCCACTTGGCTAGAGTGCCCTCGCCTGTTGTTATGACTCGTCCAGAAGTCCGAAAGGAGGTTGTCAAGATTCTGAAAGAGCTGCTGccaACATCTGGACCTACAATCAAAGAGTATTTCAAGACCTTTCAGCCAGCAGGTACAAACAATACCAGCCTCCTGTTTTCAGCTTCCACTCAGTGTTTGCAAGAAGTTCCTGATACTCAATCCTACAAAGACTTCCTTGGGAAAACATACTATGACTCTATGACAGAACTCAGCACCTGTGAGCCATCAGATCTTGTGAAAGCCTGCACTTTCCACACCTGCCAGAGAGTGGACTGAATCCATTGTCACCTGAACTGAGGAGTCCCTTCCAAATAACCATCCCTGGGCACACGCTACCAATCCCCACTGAAT

Function

GO: NA

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009131 True 899 mRNA 0.44 3 26787018 26788465

Neighbor

gene id symbol gene type direction distance location
AMCG00009127 NA coding downstream 9551 26774549 ~ 26777467 (-)
AMCG00009126 arhgef4,LOC108432112,LOC107700563 coding downstream 113779 26655165 ~ 26673239 (-)
AMCG00009125 fbxo45,LOC106590630,LOC106578473 coding downstream 151654 26630612 ~ 26635364 (-)
AMCG00009124 NA coding downstream 162075 26615929 ~ 26624943 (-)
AMCG00009119 NA coding downstream 266884 26514126 ~ 26520134 (-)
AMCG00009137 NA coding upstream 413 26788878 ~ 26789631 (-)
AMCG00009136 NA coding upstream 22430 26810895 ~ 26814469 (-)
AMCG00009132 NA coding upstream 35061 26823526 ~ 26827014 (-)
AMCG00009134 NA coding upstream 47063 26835528 ~ 26839792 (-)
AMCG00009135 NA coding upstream 64014 26852479 ~ 26860729 (-)
G54797 NA non-coding downstream 108430 26678250 ~ 26678588 (-)
G54792 NA non-coding downstream 137025 26626806 ~ 26649993 (-)
G54706 NA non-coding downstream 379154 26407583 ~ 26407864 (-)
G54697 NA non-coding downstream 536161 26250546 ~ 26250857 (-)
G54682 NA non-coding downstream 696233 26090379 ~ 26090785 (-)
G54841 NA non-coding upstream 60748 26849213 ~ 26852408 (-)
G54886 psmd2,LOC107579021 non-coding upstream 189642 26978107 ~ 26979245 (-)
G54911 NA non-coding upstream 238074 27026539 ~ 27033024 (-)
G54914 NA non-coding upstream 244687 27033152 ~ 27034216 (-)
G54978 NA non-coding upstream 632353 27420818 ~ 27422678 (-)
AMCG00009121 NA other downstream 254608 26522633 ~ 26532410 (-)
AMCG00009105 NA other downstream 1255452 25529829 ~ 25531566 (-)
AMCG00009106 NA other downstream 1324328 25460606 ~ 25462690 (-)
AMCG00009100 NA other downstream 1610640 25173677 ~ 25176378 (-)
G54544 NA other downstream 1630680 25153266 ~ 25156338 (-)
G54821 NA other upstream 5076 26793541 ~ 26796654 (-)
AMCG00009148 NA other upstream 322531 27110996 ~ 27153475 (-)
AMCG00009151 NA other upstream 525852 27314317 ~ 27335731 (-)
AMCG00009165 rpl35a,LOC106612432 other upstream 825133 27613598 ~ 27618172 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 1596618 28385083 ~ 28390096 (-)

Expression


Co-expression Network