AMCG00009132


Basic Information

Item Value
gene id AMCG00009132
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 26823526 ~ 26827014 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009132
TTTAGAAAGACGAAAACAAATCGCCATTTTAACGTCATCAACTCGCGACATTAATTTAACGTTTagttatttcttggcagaattGCACGTGTCCGAAGGgtCTTCAGCTGAGAGGATGGCGGTAAAGTGGTGCGACGGCCACACCTcgcctgtgctgtgtgtgggggCTGCTAGCTTTGAGTGCCTCCTGGCTTCAGGGGCGGAGGGTGGGGAGGTGACAGTATGGAGCGAGGAAGGCACCCCAGTTTCCACACTCaggttggagggggggggggatgtgaCCAGTGCTGTCTTTTCCCCGGGTTCCCCCAGCAAGCTGTATGTGTCTCACGGGGAGGCGGTCAGTATCCTGGACCCCAGGGCCTTGAAGCAGCCTGTCAGCGTTCTGCGCATCGGGGAGGACGAGATCAACGGACTGTCGCTGAATGAGACCAACAGCCTGCTCGCCGCCGCAGATGACTCTGGAGCCGTGAGGATCGTGGAGCTGGACAGTGGAAAGGTGGTGCGAACGCTtcgcagacacacaaacatctgCTCCTCCGTGGCTTTCCGGCCTCAGCGACCACAGAGCCTGGTGTCTTGTGGCCTTGACATGCAGGTGATGCTGTGGAGTCTGCAGAAGGCTCGTCCCCTGTGGGTGCTCAACCTGAAGGAAGCCacagaagaagaggaagagccACAGCAGTCAGCCGGCCGACTCTTCAACCCGCCTTTGGCGCACTGCGTCACTGTAGCATCCTGTGGCAACATTTTTGCCTGCGCTGCTGAGGACAGCAGGGTGCACCTGCTCAGGGTGGCGGGCTCCAAGTTCGAGCGACACGGCGTCCTGAAGGCCCACACACAGGGCGCCTCACAGGTCCATTTCCTCAGCTTCCTGACACACCCTTACTGGCTGGTTTCAGGTGGGAATGATGGGAAGGTCTTGTTGTGGGACATCTGTGAGATGGGACAGACTACTGAAAGCAAAGGCAGGGCAAAAGGTGCCCAGCGGAGGAAAAGCAAAAGTGTGCACTCGCCCAAACCGGACCAGAGCTCCAGCCAGGGTATGGCTGACCATGCGCAGGCCCCTGAGGACCACAGAGACCTTAAGCCAAAGTTCAGCTTCAACCATGGCGAGAAGGTGAACTGGATTTGTCCCACACAGCTGAAGGGAGAGGGCACGGTCATAGTGGCAGATCAGAGCAGCTCGTTATCCCTTTATACTCTGAATGGACTGTAAGGTCAATGCAACACTCCTTCTCAAGTACTCTATCACATAGACTCAAGAGCTTTGTGATCAAACAAAGACCATTAAAGAGAATGCAAAGGCAAAGATTCATTCagcatgtttttcattaatgtcTGATCCCTTGTGTTGAAATTAGTGTCTTCGGTCAGAAAATATTAGTAATCAGGCCCAGGCTGTGCAGGTAACCTATTGTGTAACCTGAGGTTTATCTCTGCAGTTTGATTATCGGTATGCTGTACTTAACCCTGTATTCCCCTACAGGGAGCAGGTCAGGTCATGTCCACTGATATTGAACCCAGAGTTAATAATTCACAGTGCTTCTGTGCTGCATTGGTTTCAGTGACCAACATCTTATCCCATTGTGAGCACTTTTGTGCTTTATGAGactgtttctttcttcttcctgATAACAACATTACACTGCATTAAATTGCTGGGAAAAGCTAAGGGATTAAAGGTGCAGTTTTCTGAATTGTGTACTGGCCCTATTTATTGTGCACTTTGAAATGGTATTGAAGCCTTAATATGGTCCTGTTTGTTTCCTGAGTGATGAACATGTTCTGTTTCTACTATTTGAATGCTGTGTGATTCAGACCTTTTTTTTCTAGCTAAATATTTAGATGACTTTAACCCATCTGCATTCTAGAAATGAAGGCTTGTACACATTC

Function

GO: NA

KEGG:

id description
K24748 WDR53; WD repeat-containing protein 53

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009132 True 1896 mRNA 0.51 3 26823526 26827014

Neighbor

gene id symbol gene type direction distance location
AMCG00009136 NA coding downstream 9057 26810895 ~ 26814469 (-)
AMCG00009137 NA coding downstream 33895 26788878 ~ 26789631 (-)
AMCG00009131 NA coding downstream 35061 26787018 ~ 26788465 (-)
AMCG00009127 NA coding downstream 46059 26774549 ~ 26777467 (-)
AMCG00009126 arhgef4,LOC108432112,LOC107700563 coding downstream 150287 26655165 ~ 26673239 (-)
AMCG00009134 NA coding upstream 8514 26835528 ~ 26839792 (-)
AMCG00009135 NA coding upstream 25465 26852479 ~ 26860729 (-)
AMCG00009133 NA coding upstream 34244 26861258 ~ 26866165 (-)
AMCG00009142 NA coding upstream 40704 26867718 ~ 26878879 (-)
AMCG00009141 ppp1r7,LOC102778584,LOC106568867 coding upstream 65257 26892271 ~ 26897656 (-)
G54797 NA non-coding downstream 144938 26678250 ~ 26678588 (-)
G54792 NA non-coding downstream 173533 26626806 ~ 26649993 (-)
G54706 NA non-coding downstream 415662 26407583 ~ 26407864 (-)
G54697 NA non-coding downstream 572669 26250546 ~ 26250857 (-)
G54682 NA non-coding downstream 732741 26090379 ~ 26090785 (-)
G54841 NA non-coding upstream 22199 26849213 ~ 26852408 (-)
G54886 psmd2,LOC107579021 non-coding upstream 151093 26978107 ~ 26979245 (-)
G54911 NA non-coding upstream 199525 27026539 ~ 27033024 (-)
G54914 NA non-coding upstream 206138 27033152 ~ 27034216 (-)
G54978 NA non-coding upstream 593804 27420818 ~ 27422678 (-)
G54821 NA other downstream 26872 26793541 ~ 26796654 (-)
AMCG00009121 NA other downstream 291116 26522633 ~ 26532410 (-)
AMCG00009105 NA other downstream 1291960 25529829 ~ 25531566 (-)
AMCG00009106 NA other downstream 1360836 25460606 ~ 25462690 (-)
AMCG00009100 NA other downstream 1647148 25173677 ~ 25176378 (-)
AMCG00009148 NA other upstream 283982 27110996 ~ 27153475 (-)
AMCG00009151 NA other upstream 487303 27314317 ~ 27335731 (-)
AMCG00009165 rpl35a,LOC106612432 other upstream 786584 27613598 ~ 27618172 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 1558069 28385083 ~ 28390096 (-)
AMCG00009215 gpr17 other upstream 2230927 29057941 ~ 29063030 (-)

Expression


Co-expression Network