AMCG00009146


Basic Information

Item Value
gene id AMCG00009146
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27037329 ~ 27058960 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009146
ATGGTCTATTGTGCCCCGTGCCTTGGTTGCGTGGCACAGTTGTCACGCTACAGCCCTCAGCTCGGTATAAAAGAGGACAGTGAGACCGTTCCTGCAGCAACAGCCATGTGGTCACTCCTGAGCTTGACCTTGTGCCTCACTTACCTCTCTCTATCCCTGACTGTGACTGTTCCCTTCCCAGAGGAGGAGCGGCAGCCACAGTTCTGGTTTGATCTGGCCCAGCGGCGTGTCCAGAGCAGCCTGTCCCGGCGAGACTCCACCACCACTGCCAGGAACCTGCTGCTCTTCATTGGGGATGGAATGGGCATGAGCACTATCACTGCCACTCGCATCCTGAAGGGCCAGCTCAGGGGTGGCAGTGGGGAGGAGTTCACTCTGGCTATGGACACCTTCCCTTACACTGCGCTCTCCAAGACGTACTGCACCGACTCTCAGATCGCAGACAGCACCTGCGCCGCCACGGCCTTCCTGTGTGGCGTGAAGACCAACAAGTTCATAGCCGGCCTGAGCGCCGCAGCTACCTTTGAGCTCTGTAACTCCACTGCGGGAAACCAGGTCACCTCCGTGCTGCGCTGGGCCAAGGAGGCAGGTAAATCAGTAGGTTTTGTAACCACCACGCGGGTACAGCACGCCACACTGGCCCCTGCCTATGCCCACACGGCAAGCCGCAACTGGTACAGCGACGCCGACATGCCAGCTGAGCAGAGACAGCAGGGCTGCACTGACATCGCTCACCAACTCGTCCACAACATCCCTGACATAGAGGTCATAATGGGGGGCGGCCGCAAGTACATGACCCCTGCTGCGACCCCTGACCCCGAGTATAATGGTGACGCCCGTTACCAAGGCCTGCGATTAGATGGGGTCAATCTGATTGACAAGTGGAGAGAGCTGAAACCTGGGAAGAATGCTTCTTATGTGTGGAACAAAGCGGATCTAGACAGAGTGGACCCAAACAAGACTGACTATCTTTTAGAGGACCTGTCCTATGAACTGGAGAGGAACAGCAGCTCAGACCCCTCCCTGCCCGACATGGTGGACATTGCGCTCAAGATCCTGGGCAAGAACCCCAAAGGATTCTTCATGCTCGTGGAGGGTGGAAAGATTGACGTGGGTCATCACGATGGAAAAGCCAAGCTGGCCCTGTACGAGACAATGCTATTGGACGAGGCTGTGGAACGTGCAGCTCTGCTGACAAATGAGAGAGACACTCTGACCGTGGTGTCAGCTGACCACTCCCACACGCTCAGCCTGGGAGGCTACACTGACCGGGGGACCCCAATCTTTGGCTTTGCCCCCGTGGTGAGTGACGTGGATGGGAAACCCTACACTTCTCTGACCTATGGGAACGGTCCTGGCTTCAGTCTGGCCAATGGCAGTCGGGCCAATCCTCAACTGAAGAACACCAGTGACCCCAACTACAGGCAGCAAAGTGCAGTGCCCCTTCGCCAGGAGACGCACAGTGGGGAGGATGTGCCAGTGTTTGCCCGTGGGCCCTGGGCACACCTCTTTCGGGGGACCAATGAGGACACCTTCATTGCCCATGTTCTGGCCTACGCTGCCTGTCTGGGACCCCACACCGCCCGCTGCAACCAGGACATCAAGGTGCCAGCCTTGGCCCCCATGCCCAGCTGGCCCTCTGTCAGCGCCTCGCCCCACCGGGCCACTCCTGCAGTTTGGACACCGGTCATTGCTCTGGTCCTGTTGTGTGCAGGACTGACCCTCAACGAGAGGATGGCATCTTACAGATACTGTGTCTTGTGTCTGTGCCTGCTGGCCAGTCTGCCTGCTGCAAAAACAGCTGCCCCAGtggaggaggaggacccTGCGTTCTGGAGGAAGCAGGCCCAGCAGACGCTCCGCTCTGCTCTCAGCCTTCGGCACAATACCAACGTGGCCAAAAACATCATCCTCTTCCTCGGAGATGGAATGGGCGTCACCACAATAACAGCAGCCCGGATTCTAAAGGGACAGCTGCAGAACAAGACTGGGGAGGAGACTGTGATGGCCATGGACACCTTCCCATATGTGGGTCTGGCCAAGACCTACAGTGTGGACTTCCAGATTGCAGACAGCTCCAGCACGGGCACGGCCTACCTGTGTGGGGTGAAGTCCAACCTCAACACCGTAGGCCTGAGCGCTGCAGGCCGGAATGGGATTTGCCGCTCCGAGAAGGGGAATGAGTCTGTGGGAATTGTGACGACAACACGCGTCCAGCACGCCACCCCTGCATCAGCCTACGCCCACAGTGCCTACCGCAAGTGGTACTCAGACTCGGATATGCCAGCAATCGCCAAGCAGCAGGGATGTAAGGACATCGCCCACCAGCTGGTTTACAACACAGACATCGATGTGATCATAGGAGGAGGTCGGAAGTACATGACCCCCCAAGGCACCAAGGACCCAGAGTACCCCTCTGACCTGAAGGCACGGGGCAAACGTGGGGACGGTCGTGATCTGATCTCCGAGTGGCAGAAGAGCAAAGCTGGGAAGGTTGCTCACTACGTCTGGAATAAGTCAGACTTTGATGCTGTCAACCCCAACACTACAGATTATCTGATGGCTCTGTTTGAACCTGGGGACTTGAGgtttgagatggagagagaccCTGCCATGGACCCCTCCATTGTAGAGACAATGGAGAAGGCCATCCAGATCCTACAGAAAAATCCCAAGGGCTTCTTCTTACTGGTGGAAGGCGGGCGTATTGACCAGGGTCACCACGCGGCCCGTGCTGCCATGGCACTGCACGAGACTGTGGCACTGGACATGGCGGTCTCACGGGCACTGGAGCTCGTCAGTGATgatgacacactcacactcgtCACTGGGGATCACTCTCACTCCTTCAACTTCAATGGATACCCCTTCAGAGGAAGCCCCATCCTTGGAAAATCCCCTCTGTTTGGAGACGATTTCTTACCATATACTACGCTAATGTATGGGAATGGCCCCGGATATAAAATCATGAACAACAAGCGGCCTGACATCAGAGGAGTAGACACAGacactgagacacacggAGGGGAGGATGTGGCAATGATGGCACGTGGACCCATGGCGCACCTCTTCCACGGCATCCAGGAGCAGAACTACATCGCCCATGCTCTAGCATACGCAGCCTGCATTGGGGAGAACCAAGACCACTGCCTCACCTCCGCCACCTCCACAAAGCATGTCACAGGCAATGCTGCCCCTTCCATTTATATCCACCTCATCGTACAGCTATTCCTGGGGCTACTGCTCACTGCCTACCTACACTGA

Function

GO:

id name namespace
GO:0016791 phosphatase activity molecular_function

KEGG:

id description
K01077 E3.1.3.1, phoA, phoB; alkaline phosphatase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009146 True 3264 mRNA 0.57 22 27037329 27058960

Neighbor

gene id symbol gene type direction distance location
AMCG00009145 NA coding upstream 4372 26994958 ~ 27032957 (+)
AMCG00009140 psmd2,LOC106613117 coding upstream 55478 26969885 ~ 26981851 (+)
AMCG00009139 NA coding upstream 134057 26898609 ~ 26903272 (+)
AMCG00009130 neu4,LOC106581489,LOC102793282 coding upstream 200912 26830199 ~ 26836417 (+)
AMCG00009138 NA coding upstream 235480 26801474 ~ 26801849 (+)
AMCG00009144 NA coding downstream 18854 27077814 ~ 27087858 (+)
AMCG00009147 NA coding downstream 43536 27102496 ~ 27104891 (+)
AMCG00009150 NA coding downstream 305345 27364305 ~ 27377706 (+)
AMCG00009154 LOC107729591 coding downstream 325808 27384768 ~ 27389302 (+)
AMCG00009153 NA coding downstream 344328 27403288 ~ 27416448 (+)
G54880 NA non-coding upstream 53172 26982843 ~ 26984157 (+)
G54833 NA non-coding upstream 186326 26849222 ~ 26851003 (+)
G54812 NA non-coding upstream 212400 26822296 ~ 26824929 (+)
G54806 NA non-coding upstream 222837 26787824 ~ 26814492 (+)
G54777 NA non-coding upstream 376983 26650482 ~ 26660346 (+)
G54928 NA non-coding downstream 37577 27096537 ~ 27096773 (+)
G54936 NA non-coding downstream 51920 27110880 ~ 27117923 (+)
G54948 NA non-coding downstream 254995 27313955 ~ 27317157 (+)
G54949 NA non-coding downstream 260808 27319768 ~ 27319971 (+)
G54950 LOC106613058 non-coding downstream 262989 27321949 ~ 27322190 (+)
AMCG00009129 NA other upstream 240561 26793537 ~ 26796768 (+)
AMCG00009108 NA other upstream 1449714 25584882 ~ 25587615 (+)
AMCG00009104 NA other upstream 1543756 25489711 ~ 25493573 (+)
AMCG00009088 LOC104966806,LOC108444346 other upstream 2119466 24898116 ~ 24917863 (+)
AMCG00009085 NA other upstream 2220795 24812618 ~ 24816534 (+)
AMCG00009164 NA other downstream 554623 27613583 ~ 27626011 (+)
AMCG00009204 NA other downstream 1707494 28766454 ~ 28799600 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other downstream 1869932 28928892 ~ 29011768 (+)
AMCG00009208 NA other downstream 2044648 29103608 ~ 29108227 (+)
AMCG00009220 lsm2,LSM2,smx5 other downstream 2112363 29171323 ~ 29174731 (+)

Expression


Co-expression Network