AMCG00009151


Basic Information

Item Value
gene id AMCG00009151
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27314317 ~ 27335731 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009151
cccatcctAAACGTTTTACTTGGGCGCTTCAATTCCTGTCAGCACTTGGCTCTGACCGGGTCTCTCATCCAGGACACATATTATTagtcttatttaattttgaatgtggaACTGAGGAGTAGTACCATTCATCACTTCGTTTTTGTAacgagagaagaaaaaaaaaaaggaaggaaaagagaaaaagagaagaaagagaaagtttCCAGTGAAGGCGAGCGGAGCAGCCAGCGTGTGTTTGGATGCTGTGCGAGTTGCAGGGATGAAGAGTTGCAGCTCGGCCGTTAtcctgtgtctctgtatctgcGCCGGGCTGGAGTCCGGCCATGCTTTAAGACTCAAGTCCCCAGCGCTGCCCATCCAGTCCGAGAGAGAGCCTGGCCCCTCCAAGGGAATCTCAGGTTGCTCTTTCGGAGGGAGATTCTACTCGCTGGAGGACACATGGCACCCGGACCTGGGAGAGCCCTTCGGAGTGATGCACTGTGTGATCTGCCACTGCGAACCAGTGCAGCAAAGAAACCGAAGGGGGAAGGTGTTTGGAAAGGTGAGCTGCAGAAACATCAAGCAGGATTGTCCCGAACCAAACTGCAGGGACCCCGTCCTGCTGCCTGGACACTGCTGTAAGAGCTGCCCTAAAGCTCGCCTGCCTATGCTGGACAAGAAAGGAGCGGAGTCGGTGTTTGAAGGCTTCGAATACTTACAAGAGAAGGATGATCTCCACAAAACCTACAATGACCGTTCCTATCTGAGCACTGAGGATATCTCCCCAGGGGACAGCAGGACAGAATTCGTGGCGCTCCTGACCAGCCCTGTGGACTCTTGGTCCATCGGTTCCAGCGGGGTGGCCCGTGCCAGGTTCACTCTGTCGCGCTCCAGCATGGTCTTCTCCATCACCTTCGAAAGGATAGCACGCCCGACCCACGTTCAATTCTTGGACAGAGATGGCAACACCTTGTTTGAATACAAAGTACCGAGGACCATGTCTCCAGACAGCAACATGGTGTGCGGGGTGTGGAAGAGCCTGTCCAAGTCTCATGTCCGGCAGCTGCGATTGGAGCACCTGCATGTCTCCATGGTGACGGTAGGCAGCCAGAGGGAGGAGGTCCAGGGCAAGATCATCAAACACAGAGCTCTGTTTGCAGaAACCTTCAGCTCCACGCTGACATCAGAGGAGGAGCATTCTGGGATAGGGGGCATTGCCATGCTGACCCTGAGTGACACAGAGAACAACCTGCACTTCATCCTGCTGTTCGAGGGCCTGCTGGATAGGAGAGAGCGAGAGCATACCCTTGTGCCCATCCGGGTTCAACTGCGGTACCGCCAACATGTGCTGAGAGAGATCCGAGCCAACGTCACAGCCCATGACCCTGATTTCGCAGAGGTTCTGACGGACCTCAACAGCCGTGAACTGTACTGGCTGTCCCGCGGACAGCTGGAGATCGCTGTGGAGACAGAGGACAAGGACCCACGCCGCATCTCCGGGTTCATCAGTGGGAGGAAGTCCTGTGACACTATCCAGAGCGTGCTGTCCAGTGGAGAAGCTCTGACTCCTGGTAAGACAGGTGGAGTGGGCTCAGCTATCTTCACCCTCCATGACAACGGCACACTGGACTACCTGGTGCAGGTGGTGGGCGTGTCCGGTAAGGTGGTCGGCGTGACGATCGAGACAAAGCCGCGGCGGAGGAGCAAACGCACTGTTCTGCATGACCTGAGCGGAGAGTACCACGATGGCCGCGCCACTGGGACCTGGGTCCATCTGGAGGCGCGCCACATCCACATGCTGCTGCAGAACGAGCTCTTTATCAATGTGGCCACGGAAGACCACCAGGAGGGGGAGCTGCGGGGGCAGATAACCTCCCTGCTGTACAGTGGGCTGGATGCCAGGAGGCATGAGGTCCCAGTGCCCCTGGCTGGCCAGATGGTGTCACCCCCCGTACAGACCAGTGCTGGTGGACATGCCTGGGTGTGGGTGGACGAGCGATGCCATCTGCACTACGAGATCGTTGCGGCCGGGCTGAGCAAGACTGACGACGTCACCATCAACGCCCACCTACATGGCTTCGCAGAGATCGGGGAGCTGGAGGACAGCAGCCCCACTCACAAGAGGCTCCTCATGGGCTTCTACGGTTCCCAGGCACAGGGTGTACTCAGAGACCTCAGTATGGAACTCCTACAACATCTGGACAGAGGGACAGCTTTCATCCAGGTCAGCACCAAGATCAACCCCAAGGGAGAGATCCGAGGACGGGTTCATGTGCCCAACAGCTGCGACTCTGCACCTGGTCTGGACCTGGGGGAGGAGGAGTTTGATGACGGTCCATACCAGGCGGCCCGGAGAGACCCCGAGACGCTGAGGAAAGACCCCAACACATGCTTTTTCGAGGGGCAATACAGAGCACATGGTTTGAGTTGGACCCCGGAATACAACAACTGCTTCACCTGCATCTGTCAGaAGCGCACTGTGATTTGCGATCCCATCATCTGTCCAGTCTTGACCTGTACACGCACCATTCAGCCAGAGGATCAATGCTGCCCAGTATGTGATGAAAGGACAGAACCACAGGCTGTCAAAAGCTTGGATAAATCAGAAGAACATCCTGAAGGCTGCTATTTTGAAGGAGATCAGAAAATGCACGCCCCTGGTACCACCTGGCATCCCTTCGTCCCCCCTTTCGGGTACATCAAGTGTGCCATCTGTACATGCAAGGGAGCCACGGGAGAGGTGCATTGTGAGAAGGTCACCTGCCCAGCACTCACCTGCAGTAAGCCAATCAGACGCAATCTGGCCGACTGCTGCAAAGAGTGCCCAGaggaggagaaggatCCCCTGGAGCACACGGACATGATGCAGGCCGACGGCACAAGCCACTGCAAGTTTGGGAAGAACTACTACCAGAACAGCGACAACTGGCACCCCCACGTGCCTCTCTTTGGGGAGATGAAGTGCATTACCTGCTGGTGTGATCATGGTGTTACCAAGTGCCAGAGGAAGCAGTGCCCCATTCTGACCTGCAGCAACATCatcaggagagagagcaagtgTTGTCCAGAATGCCAAGATGTGAACTCAAAGGAAGATGAGGAGCCACTGAAATCGCCCGAGAAGAAGCGCAACTGGAGATATTAACCACCCTGAGGTCCCCTGCTGTCTTTCACCCAGGATTGGCCACAGACTGCACGCTGGCCTGCTCCCCACACTCACACTTTGGATTTGTAATGAAACAAAGCAGAGtgaaagatagagagagagagagagagagagggggggggggagaaagcACCAGAACGGCAAAGAGGGAACTTGTAAGACACCAATGAAATATGTGCTTTGGACACGGGAGGGAATTTATACTCTGCATACTGCACATAAGAAGGAGGACAATACCTATTGCTTtaattcttttttaatttccttgcctttttatgttattttatttaactttgacTCTGAAGACTGCGGGTGTCACCTAccacctgcacacagacagacaactgCCTTCCTATCTGCATCTTCTAATTTAatgaccaaaaaacattttcatcaacGGTTTCTACCACCCATCACTTCTTAAAACATCCAACTCCTGCCTGCTGTCACCTTGATGTCCAGTATCAACATGTCTTCCTTTGAACGCCTGGCTGAAAGACATCCCAGGAAATGTACATTCTTTACAATTCAAGTCCCGAAAATCAATGCTCTGGGAATTGTTTCCAGCAATGACAGAGGAGTGGATTGAAAACCTGTCCCACTGCTGTGAAAGACTCCCTGCCAGCCCACTGCAAATATTCAGCTCGGATAACTTAGCCTGGCTCATTTGGCTCCACTTGGGAAGCGTGGGATCAGCACAGTTCCCCTCTTATAATGTGGTTTTGAATGAGCCAAGCATGCTTAGTGTGCCTATTGCTTAAACCATCCCCTACAGACAGGTTTTGATGCTGGGACCCTTCAAAGGAAGTTCTGCCCGGCTGTTTTCTTGCTCTACAGCTGGGAAAGACCTCTTTTCTGCGGACGGCTGTGATTCACTGGGTGCCTCTGTTTGGGTACTGGGGGCAGGGCCAGTTTTGGGGGCAAAGCAGAGTACACATACAGAGGAAAGACCACCCAAATCTGATATGGGAATGTTTTGGTCAAGCAATCACATAATTTTTCTCCATGACCTCAGACAAGGAAAATCTGGTCCATTGTGATTCAAGGTATTTCCTTTAACATTTTTCTGAGAATGGAAATTGCATAAAGAGACCGAACTGAGGGGATGATGGGGGATTTATTGTCTATCCTAACAATGCCTGGATTCTTCCCCTATCATGGCAGAAAAGGTGTTCAGGTTTGCCCTCAGTTTCTCAGTAATCAAATGAATGAACACTTGAGTTAACGTTAAGTGAATTGTACCTAAACCCCCACTTAGCTATAATCTTTGTGTTAAACCACAAAGATTCCCATTCTGTTTTACATAGACTTTTATTAAAGCCACAGAGTTCTTTAAAGGATCTTAAAATGGTATAATAAAGGGGATCTGTTGAAGTGCAAATGAGCCTTAATGATTGTCAGTGTTATTGTGGTGCTAATGTACAAAGCAGCTGAACTGACAGTCTTTAAACGCAACTCTGTGAGCCATTTAGGTTTAGCTTCCTCTACTCTCTCTTTTAAAACAAGAGGTACAGGGTAAACCAAAAACTATTTTCCATACGGTTTGGATGTCCGTCTTTGTACTATTTTTTATTCATGGGAACtttttagtaaaacaaaaaagtaaaggcTATTTCTCGCACAGACGTCAGGATATTTCTGTGCATGAAAGCAGACTGGGACCCATTATGGGAAGGACAGCTTCTTGTATGTTGTAAACCACACGCCATATAACCTTCAAACCATCTTCAGACACCTGCTCTGCAGAGCCAGGCTGATCAGTCTCCCAGCACAGTGTACAGGGGGGCTTTGCTTTAGCCATCCCACCCCAGGGATCCCCTGCAAAGGGAAGAGGAAATGACTGGACATCCAGGAGGGCAGAGGAGTGAGAGTAAAAGAGAGCAGGGCTGGAGGCgggtgtgtatgtggggggggtAATGGATTTGACAGATTTGTACACACACAGGATGGatttgtaaatatgtgtgtgtgtgtgtgtgtgtgtgtgctgccttTCATATGCATTGTGTTACTGGCCTGCTGCAGAGAAAAGAGTGACAGTGGGTCCTTTTTGATGCCCCTCCTCTTTCTTCCCCATTTCCCCAGTGGGGTCCGCAGAACTGGTGGTGGTCTTTGTGTTGCAGTAAAAGGATGCCCATGCTGTGCTGTAAACAGCCAGGGATCCTGTTGCCATGGGGACTGGTAGACCACCTGTATAGTGTGAGTGGGGGGTGTATCTGGTTTGGAGACAATGCAGGGTCTTTGTAGAGCAGCTCAACTACAGGGGCAAACATGGACACTAGATCACCAGGTTTGCTTTGACTTTTGGTGCACATCTGTCCAGTTAAAGGCCACTGCGCGTAGGTCACTCTGTGCCTCGATCAAAGTATTCATCCCTCTGAATCATGTGTCATGAGTGGGTTTCATTTAAAGCGGGTTAGACATGTAGCTGGGTAATTGTAAgggttttaaatggaaattgtCATGAGCTGCCCTCCGGATCCAGTCAATCCTACTCTCTCTCTAAGGTACGCTGGACTCTGTTTGCACAGGGTCAGAGCATGGCATTGCAGGGTCCCTACAAACTAGTGTGTGCCAGGTTCctttcatttctgtattttttcagcaacattttctgtcttattattgtattttttttat
>TU68666
aactgCCTTCCTATCTGCATCTTCTAATTTAatgaccaaaaaacattttcatcaacGGTTTCTACCACCCATCACTTCTTAAAACATCCAACTCCTGCCTGCTGTCACCTTGATGTCCAGTATCAACATGTCTTCCTTTGAACGCCTGGCTGAAAGACATCCCAGGAAATGTACATTCTTTACAATTCAAGTCCCGAAAATCAATGCTCTGGGAATTGTTTCCAGCAATGACAGAGGAGTGGATTGAAAACCTGTCCCACTGCTGTGAAAGACTCCCTGCCAGCCCACTGCAAATATTCAGCTCGGATAACTTAGCCTGGCTCATTTGGCTCCACTTGGGAAGCGTGGGATCAGCACAGTTCCCCTCTTATAATGTGGTTTTGAATGAGCCAAGCATGCTTAGTGTGCCTATTGCTTAAACCATCCCCTACAGACAGGTTTTGATGCTGGGACCCTTCAAAGGAAGTTCTGCCCGGCTGTTTTCTTGCTCTACAGCTGGGAAAGACCTCTTTTCTGCGGACGGCTGTGATTCACTGGGTGCCTCTGTTTGGGTACTGGGGGCAGGGCCAGTTTTGGGGGCAAAGCAGAGTACACATACAGAGGAAAGACCACCCAAATCTGATATGGGAATGTTTTGGTCAAGCAATCACATAATTTTTCTCCATGACCTCAGACAAGGAAAATCTGGTCCATTGTGATTCAAGGTATTTCCTTTAACATTTTTCTGAGAATGGAAATTGCATAAAGAGACCGAACTGAGGGGATGATGGGGGATTTATTGTCTATCCTAACAATGCCTGGATTCTTCCCCTATCATGGCAGAAAAGGTGTTCAGGTTTGCCCTCAGTTTCTCAGTAATCAAATGAATGAACACTTGAGTTAACGTTAAGTGAATTGTACCTAAACCCCCACTTAGCTATAATCTTTGTGTTAAACCACAAAGATTCCCATTCTGTTTTACATAGACTTTTATTAAAGCCACAGAGTTCTTTAAAGGATCTTAAAATGGTATAATAAAGGGGATCTGTTGAAGTGCAAATGAGCCTTAATGATTGTCAGTGTTATTGTGGTGCTAATGTACAAAGCAGCTGAACTGACAGTCTTTAAACGCAACTCTGTGAGCCATTTAGGTTTAGCTTCCTCTACTCTCTCTTTTAAAACAAGAGGTACAGGGTAAACCAAAAACTATTTTCCATACGGTTTGGATGTCCGTCTTTGTACTATTTTTTATTCATGGGAACtttttagtaaaacaaaaaagtaaaggcTATTTCTCGCACAGACGTCAGGATATTTCTGTGCATGAAAGCAGACTGGGACCCATTATGGGAAGGACAGCTTCTTGTATGTTGTAAACCACACGCCATATAACCTTCAAACCATCTTCAGACACCTGCTCTGCAGAGCCAGGCTGATCAGTCTCCCAGCACAGTGTACAGGGGGGCTTTGCTTTAGCCATCCCACCCCAGGGATCCCCTGCAAAGGGAAGAGGAAATGACTGGACATCCAGGAGGGCAGAGGAGTGAGAGTAAAAGAGAGCAGGGCTGGAGGCgggtgtgtatgtggggggggtAATGGATTTGACAGATTTGTACACACACAGGATGGatttgtaaatatgtgtgtgtgtgtgtgtgtgtgtgtgctgccttTCATATGCATTGTGTTACTGGCCTGCTGCAGAGAAAAGAGTGACAGTGGGTCCTTTTTGATGCCCCTCCTCTTTCTTCCCCATTTCCCCAGTGGGGTCCGCAGAACTGGTGGTGGTCTTTGTGTTGCAGTAAAAGGATGCCCATGCTGTGCTGTAAACAGCCAGGGATCCTGTTGCCATGGGGACTGGTAGACCACCTGTATAGTGTGAGTGGGGGGTGTATCTGGTTTGGAGACAATGCAGGGTCTTTGTAGAGCAGCTCAACTACAGGGGCAAACATGGACACTAGATCACCAGGTTTGCTTTGACTTTTGGTGCACATCTGTCCAGTTAAAGGCCACTGCGCGTAGGTCACTCTGTGCCTCGATCAAAGTATTCATCCCTCTGAATCATGTGTCATGAGTGGGTTTCATTTAAAGCGGGTTAGACATGTAGCTGGGTAATTGTAAgggttttaaatggaaattgtCATGAGCTGCCCTCCGGATCCAGTCAATCCTACTCTCTCTCTAAGGTACGCTGGACTCTGTTTGCACAGGGTCAGAGCATGGCATTGCAGGGTCCCTACAAACTAGTGTGTGCCAGGTTCctttcatttctgtattttttcagcaacattttctgtcttattattgtattttttttatttgtattattgttattgttattatttttataattattattattattattattattattattattattatgaataataattagttttctttttttgtatttattgaatgtgagg

Function

GO:

id name namespace
GO:0007275 multicellular organism development biological_process

KEGG:

id description
K04657 CHRD; chordin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009151 True 5788 mRNA 0.51 22 27314430 27335731
TU68666 False 2411 lncRNA 0.43 1 27314317 27316727

Neighbor

gene id symbol gene type direction distance location
AMCG00009149 clcn2 coding downstream 114010 27169408 ~ 27200307 (-)
AMCG00009143 LOC108277812 coding downstream 396838 26906530 ~ 26917479 (-)
AMCG00009141 ppp1r7,LOC102778584,LOC106568867 coding downstream 416661 26892271 ~ 26897656 (-)
AMCG00009142 NA coding downstream 435438 26867718 ~ 26878879 (-)
AMCG00009133 NA coding downstream 448152 26861258 ~ 26866165 (-)
AMCG00009158 NA coding upstream 141788 27477519 ~ 27490312 (-)
AMCG00009155 NA coding upstream 160072 27495803 ~ 27503596 (-)
AMCG00009160 abcf3,LOC106580643,LOC106612436 coding upstream 172297 27508028 ~ 27516925 (-)
AMCG00009156 LOC108229448 coding upstream 181778 27517509 ~ 27522991 (-)
AMCG00009159 ap2m1b,LOC108440593,LOC107602122,LOC108264350 coding upstream 192526 27528257 ~ 27540565 (-)
G54914 NA non-coding downstream 280101 27033152 ~ 27034216 (-)
G54911 NA non-coding downstream 281293 27026539 ~ 27033024 (-)
G54886 psmd2,LOC107579021 non-coding downstream 335072 26978107 ~ 26979245 (-)
G54841 NA non-coding downstream 461909 26849213 ~ 26852408 (-)
G54797 NA non-coding downstream 635729 26678250 ~ 26678588 (-)
G54978 NA non-coding upstream 85087 27420818 ~ 27422678 (-)
G55025 NA non-coding upstream 189955 27525686 ~ 27525979 (-)
G55026 NA non-coding upstream 190316 27526047 ~ 27527494 (-)
G55153 NA non-coding upstream 535271 27871002 ~ 27871261 (-)
G55268 NA non-coding upstream 1152920 28488651 ~ 28505796 (-)
AMCG00009148 NA other downstream 160842 27110996 ~ 27153475 (-)
G54821 NA other downstream 517663 26793541 ~ 26796654 (-)
AMCG00009121 NA other downstream 781907 26522633 ~ 26532410 (-)
AMCG00009105 NA other downstream 1782751 25529829 ~ 25531566 (-)
AMCG00009106 NA other downstream 1851627 25460606 ~ 25462690 (-)
AMCG00009165 rpl35a,LOC106612432 other upstream 277867 27613598 ~ 27618172 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 1049352 28385083 ~ 28390096 (-)
AMCG00009215 gpr17 other upstream 1722210 29057941 ~ 29063030 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 2325229 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 2642206 29977937 ~ 29990810 (-)

Expression


Co-expression Network