AMCG00009168


Basic Information

Item Value
gene id AMCG00009168
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 27625791 ~ 27656578 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009168
TCGGctcttaaaaacaagaacacataTAACTATCGGATTAACGCTATGAGcgcaatcgggttcaagtctgggggCGGCCCGGGCTTGAGGAAAGGGCCGGGGTCCAGCGGCAGTGCGGACGGTTTAGATAAGATTGACATGTCACTGGatGATATAATCCGATTGAACAGGAAGGAGCAGCGATCCCAATGGCCTGGATCAAGTCCTCGTGGACCCCAAATTAATGGCCAGCTCCCCCAAGCCTGGAGAGGGGCTCCCTGGACTGGGGGCCCAAATCAGAGAGGAGGCAGTGTGGGCTGGCTGGGGGTGCGAGGCCGAAGAGGGGTACCTCCAGTGCTTCGTCGGCGAGGTCAGGGGGTTGTCACGGGGCTGGCTGCCCGCCGGAGCACTGCGCTGCGCAAGGGCATCAGCCCAATGAACCGACCCCCACTCACCCAGgtactgagggagagagaacaaGTAAGTCGgaATTTGCTCCCTGCCTGgaagccccccccccagcagTCCCAGAGAGAGGCTCGCCAAGCCACTTTCCTCTTCCGCCGGGGCCTAAAGGTTCAGACACAGGTGCAGAGCCCTGTCCCGCCCCCAGTGACACACCGGACTCGACCGTGGCGCACATCGACGACCAGCGGAGGAATACTGACCATCTCCATTGACAACCCCACTGCCAGAACGCAGCCAGAGCCGCCTCGAGCCCGAGTGTTGCGCCCGCCTCTGCCCCCTACTCCAGTGAAGCGGGAGGAGCCAGAGCAAAGGAAGCCCCCCAAGGGTGTGCCGCTTCAGTTTGACATCAACAGTGTGGGCAAGCAGACGGCGATGACACTGAATGAGCGGTTCAGGATCCTGAAGGACCAGCGTATGGCAGCCACACAGAGCATTGTTGCGCAGCCGCAGAGTGAGTCCAGTctcagcgagagagagagagaaacagtggGAGTAAGCTGTGTAATGGCGGCCGCGGTCTTACTGTCGGTGGAGAGCCCCGGCCCCGGAACGACAGGAGGTGCCTGTACCGGGCCAGGAGCAGCGGGTCCTGCCTCCTGGAATCGCTCGCTGGACCGGGCCCTGGACGAGGCGGCGGCCACGGGCTCGCTGAACCTGAGTGGCAGGAAACTGAAGGAATTTCCAAGGAGCGCCGCAAACCACGACCTCACAGACACGACTCAGGCCGATTTATCACGAAACCGACTGTCAGAGCTGCCCATTGaggtgtgtctgtttgtgtcgcTGGAGAGCTTGAACCTGTACCAGAACTGCATCCGCACTCTGCCTGAGACCATGCTCAACTTGCAGGCCCTTACGTACCTCAACATCAGTCGTAACCAGCTTTCCACACTGCCGGCTCCAGTTTGTAGTCTGCCCCTGAAGGTGCTGATTGCCTGCAACAACAAGCTGGTGTCTCTGCCAGAGGAGATTGGCCAGCTCCGGCAACTCACAGAGCTGGATGTCAGCTGCAATGAGATCCAGACTCTGCCTCCTCAAATGGGCCAGCTGGAGGTGCTCCGGGACCTCAACATCCGCAGGAACCACCTGGCCCGGCTTCCCCCAGAGCTGGCAGAGCTGCCCCTGGTGCGGCTCGACTTCTCCTGCAACAAGGTGACGACCATCCCGGTGTGTTACCGCAACCTGAGGCACCTACAGAGCATTGTCCTGGACAACAACCCACTACAGTGCCCCCCTGCGCAGATCTGTATTAAGGGGAAGATCCATATATTCAAATTTCTGAACATAGAGGCGTGTAAGACTGTGCCCGAGTTGCCTGACTTCGACCGCCGGCCCCTGGGCTTCGGCTCCTGTGTGGAGGAGCTGTATCCTGGCCGGTCATATGGGGCGCTGGATTCGGGATTCAACAGTGTGGACAGCGGGGACAAGAGGTGGTCGGGCAATGAGATTGACTTTATTGACAGCTGCACAGgcgaggaggaagaggaggagtcTCGGCACCGGGCGGCAGAGCCAGCCAGCCTCAGCACACAGTTCATGGCTTACATAGAAAAGAGGATCACCAAAGAGGGTTCTCCAGTGAAGTCTAGCCCCTCCAGGGACTCGGCACGGACAGATGACCCTCGGAGACACCTCGCACTACACAGCAGGAACCTCCTGGACAGTGGCAGTACGTCGCTCTCTTCTGCTCAAAGCCAGCGGGTGTCTGGGGGTGTGGAGCGCATGCGGCGGGAGGCCCAGCTGGCAGCCCAGCAGTACGaggaggagaggcagagagccCGACACTTGCAGAGAGAGGCTGTGCTCAGCTACGTCAAGCACAAAGCAACAAGCCCCACGAAGCACAGCCCCACCGACAGTGAGAGCCCGTTCCCTTCCAGACGCTCCACTCACACGGATGACTCCGCCCTCTTCATGAACGGCTATCAGCCGCTTATGGTGTTTGAAATAGACAATAACACCAACACCATTAAGAGGAGACCGGGCACCCACAAACAGAGTGATGACCggtcccccctctctcccagcTCCAATCTGCCCTCCTCAGCCCCGGTGCTCAACCCCCTTGCAGAGTCTCCGCCCTCCGACCCGAAAGCCTCCTGTTACGCCTCAGCCAGAAAGAGGAAACCAAGAGAGGTAGAGTCAGCGTCCTCGCGCCCAGAGCCAGTCGAGGTAGGAATCCCTCAGAGCAGTGCCGCCCAGGGGGAAGAGGCTGAGCTGGTGGAGCAACTGCGTAAGAGTATCGAGTCACGGCTAAAGGTGTCCTTGCCGAGTGACCTGGGGGCAGCGCTGACGGACGGTGTGGTGCTGTGCCACCTAGCCAATCACGTGCGGCCGCGCTCAGTGCCCAGCATTCATGTGCCCTCGCCCGCTGTGGCCCAGCTATGTCTGCCACTGCACATCCTGGAGGAGCGAGGCTTGCCCCAGGTGGCTGGGACGGTCGGCGCGCTGCTGGAGCTCGCCCCCCCAAAACACCCCCCGCCCTCGCCCTCACAAGTCTag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009168 True 2949 mRNA 0.60 27 27625791 27656578

Neighbor

gene id symbol gene type direction distance location
AMCG00009166 abcc5,LOC106612343,LOC107671530 coding downstream 14913 27581875 ~ 27610878 (-)
AMCG00009157 rnpepl1 coding downstream 46372 27572185 ~ 27579419 (-)
AMCG00009161 dvl3,LOC107670590,LOC107758060,LOC107575491 coding downstream 56039 27549706 ~ 27569752 (-)
AMCG00009159 ap2m1b,LOC108440593,LOC107602122,LOC108264350 coding downstream 85226 27528257 ~ 27540565 (-)
AMCG00009156 LOC108229448 coding downstream 102800 27517509 ~ 27522991 (-)
AMCG00009167 NA coding upstream 17094 27673672 ~ 27685047 (-)
AMCG00009172 NA coding upstream 40152 27696730 ~ 27710472 (-)
AMCG00009171 NA coding upstream 64292 27720870 ~ 27728202 (-)
AMCG00009174 NA coding upstream 134795 27791373 ~ 27798650 (-)
AMCG00009178 mfsd8,LOC106510830,LOC107086866,LOC108234272,LOC102791428,LOC101485663,LOC102289364,LOC107392755 coding upstream 707700 28364278 ~ 28378869 (-)
G55026 NA non-coding downstream 98297 27526047 ~ 27527494 (-)
G55025 NA non-coding downstream 99812 27525686 ~ 27525979 (-)
G54978 NA non-coding downstream 203113 27420818 ~ 27422678 (-)
G54914 NA non-coding downstream 591575 27033152 ~ 27034216 (-)
G54911 NA non-coding downstream 592767 27026539 ~ 27033024 (-)
G55153 NA non-coding upstream 214424 27871002 ~ 27871261 (-)
G55268 NA non-coding upstream 832073 28488651 ~ 28505796 (-)
G55326 NA non-coding upstream 1064962 28721540 ~ 28727970 (-)
G55333 NA non-coding upstream 1098720 28755298 ~ 28755633 (-)
G55359 NA non-coding upstream 1186895 28843473 ~ 28893883 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 7619 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 290060 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 472316 27110996 ~ 27153475 (-)
G54821 NA other downstream 829137 26793541 ~ 26796654 (-)
AMCG00009121 NA other downstream 1093381 26522633 ~ 26532410 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other upstream 728505 28385083 ~ 28390096 (-)
AMCG00009215 gpr17 other upstream 1401363 29057941 ~ 29063030 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 2004382 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 2321359 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 2593293 30249871 ~ 30256499 (-)

Expression


Co-expression Network