AMCG00009182


Basic Information

Item Value
gene id AMCG00009182
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 28446424 ~ 28455131 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009182
GTTAAGcctctccaaaaaaaaaaaagtatttacctAATTTGTAAATGTTGCTGTGCTTCTTTCAGAGGTGCTGACAATATCCAGGTAAATCTGTCACCTGGAACTATCCCTGACATGGGCAGGCCTCCTTGGTTTAATTCTTATCAAGTATGTCAGTAAAGAAGTAAAGTTTATGACTTTGACGGGAACTCCAGTAACTGGAAAGCCTGTGCAAATAGATCCAGTGGGCGGGTGGATTTCTGTTAAGATAAAAGACAGAGTGTAGAAGCAGGTGTTGTGGTGAAGAACACAGCCGAGTGACCAGCCACCTTGCACAGGTCTCTAACTGAGAGGAAATGGCTTTCCATGAACGCCTGTCTACTACACAGAGAATATTGCTAGCACTTGTGTGTTTTCCATGTCTTCCATTCTACCTGTGCTATGTCTGCTGCTGTGCCAAGAAAAAGGACGATGGAAAACAGGAGGACAGTCTGGAGCGCATAGAGGAGGGTCGGCAGGATGCTGTCCATGGCCACAATAATGGAGGTACAGCGGAAGCGAAGGTGCGTCCCAAAACAGGAACACCAAAGCTGTCAAAGAAGTCTGACTTGGGCAAAGCGGAAGTGGAAGTGCATCCCAAAACAATAACACCAAAGCTGCCAAAGAAGTCTGACTTGGGCAAAGcaggggaaaaaacagagaaacaggaAGCTAGCTATGAAAACCGGGGGTTCGTTGATGACCGTAACACAACCCAGAGCAGCAAAGCAAAGGAACATTATGTGTACCCATGGGACAGGTCCAACCTCAAGTCCCTCCGGATAGATCTGAATAAGTTTAAACAGCTTGATGCCTATGCTTCCACGATGAAAGTCAGGAGCAGCGTGGAGCTCTTGGTTCAGGAGCTGCTCAAGCAAGCATGCAGTGACATTGAGAAGCTCAGGGCTGTCTGGATGTGGGTCACACACCACATCGAATATGATGTGAAAGGACTGCACAACGCCAATCTCCGGTCTACTGACCCTGAAGACATCCTCAGGACAGGGAAGGGGGTGTGTGCTGGATATTCTGCACTTTTTCAAAAGATGTGCAGTCTCGCAGGAGTGGAGTGTGTGGTGATATCTGGGTATGCCAAGGGCATTAACTACTTTCAGGGGATGAGCTTCAAAGGAGATTCAAACCATGCTTGGAATGCTGTTAAACTGCAGGGCCGGTGGCACCTTCTGGACAGCACATGGGGAGCTGGGGACGTCAATGATGACCACTTCACATTTAAGTATAAGGAGTTTTACTTCTTGACTCATCCTGCACTCTTTATTGGGAATCATTTTCCCAAGGAAGGGACGTGGCAGTTACTGAATCCTCGGGTTTCTTTGAGGCAGTTTGAAAATGCTCTGTACAAGTGTAACACATTTTATGATCTTGGCCTTCTTTCCATAACCCCAGATTCACCTGTCATCCAAGCAGGAGGAAATGGGAAGGTGACAGTGGAAGTGGAGAGTTCTACCCCCAGGCTGTTTATACATGACCTGAATGGAAATACACAATATGGGCTCATCATGCTCAAACCAAATGGTATGAAGCTGGACGTATACCCGCAGGCCCCTGGCAAGCATTGCTTAAAGATCTATGGAAAAGATTCTGAAGCCAGAAACTCGTATGGCTTTGTGTGCGAGTACCAGGTCCACTGCAAGGCCATCAACACGGAGATGAGGTTGCCAGCTGACATTACCAACCCAGTGGGCCCCAGCTGGTTGACCGAAAGCAAAGGCCTTCGCCAGCCATCCCAGCGCCAACCTCTGATCCACACCGAGGACGGCAAGTGCTCCTTTCGCTTCTTAGTGGACCGCAACGTCCAATTCATGGCCTGTCTGGCTACGGCCACTTTCTCCATGAACGAGGATGAAAAGAGACGACATGTGTTTTTGTCCAGAGAGGGAAACTGGCTGGAGATTAGGGTTCAGCTACCAAGGGCGGGATTGTACGTGctcaatatatacagtaaaactCAGGCTGATCCAAGCAAGCACTATAGTTTCATCTGTAATTATCTGATCTCCTGCACCAATACCAAGGTGATGTGGCCTGTGTTCCCTCTGGCCTACGCAACCTGGGAAGAGGACTATGAGCTGGTGGAGCCCCTTGCTGGAGTTCTCCCTGCCAACCGCACCGTGCACTTCAAGATGAAGATCCCCCATGTGGCAGCAGTGTTAGTAGGGGCCAGAGATCACAAGCTGAGTCTAGACACTAATGGGTATTGGACTGGATCCTGCAGTACTCAAGGCTGCACGGACCTGAACGTCATGATCAAAAAGAATCCTAATGACTGTTCTTACTCCTTTGTGCTCAGTTATCAAGTAGAGAAAAACTAGCCTTCGGTTCCCTTGCCTCCCCCTGCATTTCTGAGGGATGTTACTCTTGAATTCATCTAGAGTGATGGGAAGTCAGTGTACTTTACACCTTAACTGCATCAGATCAAGTTGTAAGTCAGATCTAGAGAGGACAACAAGGATCCAAGCCAACAAGATTTCTCTCAGACTGGTGTATAATTGGAAAGGGTCTTGGCCTACATACATCTCCCCATTCACGACTTGCTTCACACTCTCAACGGATCTGCCTGGCCAGGGAACCCCTTAAAGACATAGCCCAGTAATTATCATTACTCTGGTTAAAATGTCCTGTAATGtaatttttacaaatgtattttttatgagaaGGAGGCTCTGTGCCTAAACTGAACGATGGAAAAAAGTTCAGCAGTGTATTACAATCCTGCACCTGATTTGCTATAGTTGCTGTATCAAAGACTGTATTTGATTTCCTTCAAtaatttactgcactttgttcttttttattttaacttataaactggaattatatttttgaatgtcgGTCATCTATGTCAGTTGAATACCTCAGCGAATTTAATGAATGaacaataactgtaaataaaaatgctggTGTAATGTT

Function

GO: NA

KEGG:

id description
K24456 KY; kyphoscoliosis peptidase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009182 True 2949 mRNA 0.46 14 28446424 28455131

Neighbor

gene id symbol gene type direction distance location
AMCG00009183 NA coding downstream 924 28408929 ~ 28445500 (-)
AMCG00009185 NA coding downstream 44478 28390411 ~ 28401946 (-)
AMCG00009179 NA coding downstream 62901 28380948 ~ 28383523 (-)
AMCG00009178 mfsd8,LOC106510830,LOC107086866,LOC108234272,LOC102791428,LOC101485663,LOC102289364,LOC107392755 coding downstream 67555 28364278 ~ 28378869 (-)
AMCG00009174 NA coding downstream 647774 27791373 ~ 27798650 (-)
AMCG00009184 hdlbp coding upstream 8662 28463793 ~ 28480382 (-)
AMCG00009197 stk25b,stk25,LOC107585675,LOC107722570,LOC107693719,LOC107589848 coding upstream 127094 28582225 ~ 28599842 (-)
AMCG00009193 NA coding upstream 155739 28610870 ~ 28616138 (-)
AMCG00009194 LOC106560660 coding upstream 172281 28627412 ~ 28630951 (-)
AMCG00009195 NA coding upstream 177224 28632355 ~ 28640611 (-)
G55153 NA non-coding downstream 575163 27871002 ~ 27871261 (-)
G55026 NA non-coding downstream 918930 27526047 ~ 27527494 (-)
G55025 NA non-coding downstream 920445 27525686 ~ 27525979 (-)
G54978 NA non-coding downstream 1023746 27420818 ~ 27422678 (-)
G54914 NA non-coding downstream 1412208 27033152 ~ 27034216 (-)
G55268 NA non-coding upstream 33520 28488651 ~ 28505796 (-)
G55326 NA non-coding upstream 266409 28721540 ~ 28727970 (-)
G55333 NA non-coding upstream 300167 28755298 ~ 28755633 (-)
G55359 NA non-coding upstream 388342 28843473 ~ 28893883 (-)
G55404 NA non-coding upstream 600582 29055713 ~ 29057241 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 56328 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 828252 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 1110693 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 1292949 27110996 ~ 27153475 (-)
G54821 NA other downstream 1649770 26793541 ~ 26796654 (-)
AMCG00009215 gpr17 other upstream 602810 29057941 ~ 29063030 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 1205829 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 1522806 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 1794740 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 2144343 30599474 ~ 30657612 (-)

Expression


Co-expression Network