AMCG00009196


Basic Information

Item Value
gene id AMCG00009196
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 28643287 ~ 28649073 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009196
ATGAAGCCTTTATCCCCGGTCACAGTGCTGAGAAGCCAAAGGGTATTTTGGGGTACTGGCATCCAACCTGCCCTCATTATAATCAAAGATGGAAAAATTCTGGAAATCCTCTCTGATTGTGATCAAAACATTGGAGATGCATCTGAGGTGCTGGATGTGGGCTGTCTGCTGGTGATGCCGGGATTGGTGGACAGTCACGTCCACGTTAATGAGCCTGGACGCACCGCCTGGGAGGGCTTCCAGACTGCCACCCGCGCCGCCGCAGCTGGAGGGGTCACCACCATTGTGGACATGCCCCTCAACAGCATCCCTCCTACCACCACGCTCAGTAATTTCCAGACCAAGATGCAGGCAGCCACAGGGCAGTGTTTTGTGGACACGGCCTTCTGGGGAGGAGTTATCCCCAATAACCAGtcAGAGCTCCGTCCACTGATCCAGGCAGGAATTGCTGGCTTCAAATGCTTCCTGATCCAGAGTGGAGTGGATGAGTTTCCACATGTAACTGAAAGTGACCTCCACACAGCAATGGCGCAGCTCCAAGGAACAGGCAGTGTCCTGCTGTATGCCTCCTTCCTTAACTCACGCCCTGACGTCATGGAGCTGGAGGCCATTCTGACAGTTACACAGCTCTGTCTGCAATACCAGGTGCGATGCCATATTGTCCACCTGTCCTCTGCCAAGGCCATAGAGCTCATCCAATCTGCCCGCCAGGCTGGTGCCCCGCTCACGGTGGAGACCACTCACCATTACCTGACCCTCTCTGCAGAGCACATTCCCCAGGGCGCCACCCAGTTCAAATGCTGCCCGCCCATCCGCACACAGGCTAACCAGGATCAATTGCGGTCAGCGCTGAAGGCTGGCCAGATTGACATGGTGGTGTCTGACCACTCACCCTGCACTGAGGAACTGAAGAGACTGGACTCTGGGGACTTCACTCAGGCCTGGGGGGGCATTTCATCTCTGCAGTTCGGTCTGTCGTTGTTCTGGACCACAGCCAGACAAAAGGGTTTTTCGGTGGCTGATGTGGTGAGGATTCTCTGCCAGAAACCAGCAGAGCTCTGTCACCTTGACAACCAGAAAGGCTCTCTCCTCCCTGGCTACGATGCTGACTTGCTGAATGAAGATGACATACATCATAAAAATAAGCGCTGTCAGTGTGTGACGAGTGTGCCTGTCTTCTCTCTGCAGCTGTCACCCTACCTTGGCTTCAGGCTTCATGGACAAGTGTTTGCTACAATTGTCAGAGGACAAATTGTGTACATGCAGGGCACCTTTTCCCCACAGCCTCTGGGAAAACTACTTCtt

Function

GO: NA

KEGG:

id description
K01466 allB; allantoinase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009196 True 1305 mRNA 0.54 10 28643287 28649073

Neighbor

gene id symbol gene type direction distance location
AMCG00009195 NA coding downstream 2676 28632355 ~ 28640611 (-)
AMCG00009194 LOC106560660 coding downstream 12336 28627412 ~ 28630951 (-)
AMCG00009193 NA coding downstream 27149 28610870 ~ 28616138 (-)
AMCG00009197 stk25b,stk25,LOC107585675,LOC107722570,LOC107693719,LOC107589848 coding downstream 43445 28582225 ~ 28599842 (-)
AMCG00009184 hdlbp coding downstream 162905 28463793 ~ 28480382 (-)
AMCG00009209 NA coding upstream 371565 29020638 ~ 29023928 (-)
AMCG00009212 NA coding upstream 380236 29029309 ~ 29052524 (-)
AMCG00009213 NA coding upstream 414690 29063763 ~ 29089403 (-)
AMCG00009211 NA coding upstream 440982 29090055 ~ 29103281 (-)
AMCG00009210 NA coding upstream 471342 29120415 ~ 29135151 (-)
G55268 NA non-coding downstream 137491 28488651 ~ 28505796 (-)
G55153 NA non-coding downstream 772026 27871002 ~ 27871261 (-)
G55026 NA non-coding downstream 1115793 27526047 ~ 27527494 (-)
G55025 NA non-coding downstream 1117308 27525686 ~ 27525979 (-)
G54978 NA non-coding downstream 1220609 27420818 ~ 27422678 (-)
G55326 NA non-coding upstream 72467 28721540 ~ 28727970 (-)
G55333 NA non-coding upstream 106225 28755298 ~ 28755633 (-)
G55359 NA non-coding upstream 194400 28843473 ~ 28893883 (-)
G55404 NA non-coding upstream 406640 29055713 ~ 29057241 (-)
G55488 NA non-coding upstream 809542 29458615 ~ 29458827 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 253191 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 1025115 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 1307556 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 1489812 27110996 ~ 27153475 (-)
G54821 NA other downstream 1846633 26793541 ~ 26796654 (-)
AMCG00009215 gpr17 other upstream 408868 29057941 ~ 29063030 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 1011887 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 1328864 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 1600798 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 1950401 30599474 ~ 30657612 (-)

Expression


Co-expression Network