AMCG00009206


Basic Information

Item Value
gene id AMCG00009206
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 28910313 ~ 28926828 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009206
ATGCCGCTGGAAGAGATTGGGAACTCGGTCCTGATTCTTTTTGTGAGTTATATGGGGAGTCGTGTTCACAGACCTCGGCTGATTGGACTAGGGGGGGTGCTCATGTCAGTGAGCGCTTTTATTCTGACGCTGCCCCACTTCCTCTCTCAACCCTATGAATACGCCTCTGTGTTTGTAGGAAACGGCAGCAGTTTGTCCCAGGATTTGTGCTTCCAACATGCGAATgccacctccccctcctctaCTGAGTCCTGTGGCCAGAGTGACTCCAGGACCCTGAGTGATACCAACAGCTTGTGGCTCCTGATGGTCATCGCACAGCTGCTCTTCGGGATTGGGTCAGTGCCCATCCAGCCATTCGGATTCTCCTACGTGGACGACTTTGCGGAACCAGGAAATTCCCCGATTTATATTGcGATTCTCTTCGCATTGGCAGTGTTCGGGCCTGCCTTTGGGTACCTGCTTGGCTCAGTGATGTTACGGATTTATGTTGATGTGGACAAAATAACTCTGGACAGCAAGCTGGAGCTTAAAGTTACAGACCCCCAGTGGATTGGGGCCTGGTGGATGGGGCTCCTGGTCTCATCAGGGTGCCTGGCACTCACCTCTATCCCCTACTTCTTTTTCCCCCGGGAGATGCAGGGAGACTCTAGCATGGTGAAGGTAAATGGAGCTGAAGCCGATGTTTTAAAAGAAGACCCGAAGCAGGACCAAGCCACGTTATGTGACTTTCTAAAGCAGTTCCCACGTCTGTTTGTGAGACTCCTGTTGAATCCCCTGTTCCTGCTGGTGGTGCTGGCGCAGTGCTGCTTCTCGTCCGTGATCGCTGGCCTTGCCACTTTCCTGAACAAGTTCCTGGAAAGGCAATATGGAACCACGGCCTCCTTCGCCAACCTCCTCATTGGCGCCATTAACCTGCCTTCTGCAGCGGTGGGGATGCTGTTGGGAGGGATCATCATGAAGCGCATGGGTCTGTCGCTAAAAGTGATCCCCCGGTTTTCCATTGCCATGCTGCTTATCTCCATCCTGTCATGTATCCCTCTGTTCTTCATGGGCTGCTCCACACAACAAGTAGCAGGAATTAACACCCGGTACACCAGCAGCTCCCAGAGCCTGGACTTGCGATCACAGTGCAACTCTGGCTGTTCCTGTCCAGATAACGCCTTCCATCCGATCTGTGGCTCAGATAACATTGAATACTTATCACCCTGCCACGCTGGATGTAAAAACTATTCTGTGGGATCCCAGCCCATCAGGGTTCAGAACTACTCTGGCTGCAGTTGCATCCTTGGAGGGGGGAGACCTGGCGTGGCACGCCCAGGGGCCTGTACCATCAGCTGCTCCCACTTCCTCCTCCCCGTCATATGTCTAATTTCCTTTGCTGGCTTCATTGCCAGTCTCTCTCATAACCCCCTGTACATGATGGTTCTGAGGAGTGTACCCCAAGACGAGAAATCTTTTGCCATAGGAATACAGTTCTTGCTCATGAGAGTACTCGCTTGGCTGCCAGCTCCAgccatatttggtgtgatcatTGATTCTACCTGTATCAAGTGGAAAGAGCTGTGTGCAAAGAAGCTTGGGGCCTGCACTTACTACGACAATGACCTCCTTAGGGGGAGATACCTGGGCCTCCAAATTGGATTTAAAGCGATGGGGATTTTCCTGCTCGGCTTGGTTAGTTGGAAAGTACAGCGCACCAATCAGTACAGTTTCCAGAAGAAATCCGAAGGACCTGTGTGAAGCGGACACTGCCCCCACTTCCACTGCATTGAAAAGGGAGACTAAACTTTGTGTTTGTCAGCTTTATTTGGAGTTTTGTTGAAGTGACAATGCACTATAACTCTTACCTCACAAAATGCCACTTCCCTAAAGAGAGGAGAACAtgtaaagaaaaccaaaaccactCCAGCACTTACCGATGGCACCTAGGATACCTCACAGCAGTGACATTTTAGCAGGCCCTTCTCCTTCACTTCAGGGGGTAGCTGGCTATCTCgataatttgttgttgttcatatATGGAAAGTTCCCACCTCTACTGCTTCATGTAcatatggaaaaaaacatacatgaaacaTAAAAGGCCTTATTTTGAGTTTGTTCTCATCtacattatgttttgttttgtttttgctgttgagATGTACATAATTAActgtttgtacattttacatgtttcttGTATTGCACTGAATCTATTGAGAGAAGTATTTTGTATGGTGTGGGGAATCACTGAACACTGGTTTCTTGAttgaaacatatttcaaatgtgaGATCACATAGTAAGCCAACATAAATGAAGTGAGTTCATATTTACCCCTGTTATAATTGTATGAATCAGGTTGTATATGTTATATTTTGCTTGCCagctttcaatttaaattgtaaatcatATATAAACATGGATATcttaaaaacagatattttgtGTTTAGTATAACAATACCTTCTTGGAAAAATTAGATTTTCAAGCTGAAAGGCACTATGAAATCGTGATTGTGACTACCTGGCCTGCAGAGACACAAGATGTCCTAGACCCCAACTAAGACAGAAACGAGAACTCTTGATAAAAGGTTTGAGCAAAATGGGTACACTCTAAGTGAGTAAATCTCATTAAGGAACTTCATATATGTACCTACAGAATTATGATTCATAAACGCTTAATTGGAGCCATTCACCTCTCAAaggaaaaatattgtatattaaactGATAGCTTGAAAACATCTGACTGTCCTGGTTGATAAATTAAACAGTCTCAAACTATTTGTGCCAgagtaaaatacaattatgccTTATTGACATAATTTGCAATGACACTTGCACCATGTGATTTTTCACCCATGCTGTTTGATCCTCAGCAGAGGACAAGTATTGCCAACAACACCTACCCCTTAAATGTGGGCATGGACCTATTGTTTGTCCTTTGGTTTGCATTCTCAAACGCATTTGCCCAAAGACAATTACTCTAAATCCATTTGCACAAATAAAACCATCTGTCTATGACATACAAAGAA

Function

GO: NA

KEGG:

id description
K14345 SLCO2A; solute carrier organic anion transporter family, member 2A

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009206 True 3018 mRNA 0.45 13 28910313 28926828

Neighbor

gene id symbol gene type direction distance location
AMCG00009203 ryk coding upstream 17269 28867586 ~ 28893044 (+)
AMCG00009205 NA coding upstream 73901 28802969 ~ 28836412 (+)
AMCG00009198 NA coding upstream 147795 28756555 ~ 28762518 (+)
AMCG00009200 espnl coding upstream 155139 28736283 ~ 28755174 (+)
AMCG00009201 NA coding upstream 174460 28729396 ~ 28735853 (+)
AMCG00009202 NA coding downstream 87564 29014392 ~ 29019892 (+)
AMCG00009214 LOC106599142 coding downstream 148253 29075081 ~ 29102077 (+)
AMCG00009221 NA coding downstream 382028 29308856 ~ 29309773 (+)
AMCG00009218 NA coding downstream 439810 29366638 ~ 29402226 (+)
AMCG00009219 LOC100694679,LOC102204076,LOC108271779,LOC105925372,LOC102787755,LOC102295835,LOC101474685 coding downstream 489608 29416436 ~ 29419290 (+)
G55357 NA non-coding upstream 11620 28897976 ~ 28898693 (+)
G55308 NA non-coding upstream 276981 28632355 ~ 28633332 (+)
G55300 NA non-coding upstream 280016 28627663 ~ 28630297 (+)
G55257 NA non-coding upstream 445087 28464562 ~ 28465226 (+)
G55205 NA non-coding upstream 526810 28383000 ~ 28383503 (+)
G55394 NA non-coding downstream 102490 29029318 ~ 29031478 (+)
G55461 NA non-coding downstream 258093 29184921 ~ 29185184 (+)
G55463 NA non-coding downstream 259866 29186694 ~ 29187955 (+)
G55487 NA non-coding downstream 531593 29458421 ~ 29458743 (+)
G55512 NA non-coding downstream 714661 29641489 ~ 29641936 (+)
AMCG00009204 NA other upstream 110713 28766454 ~ 28799600 (+)
AMCG00009164 NA other upstream 1284302 27613583 ~ 27626011 (+)
AMCG00009129 NA other upstream 2113545 26793537 ~ 26796768 (+)
AMCG00009108 NA other upstream 3322698 25584882 ~ 25587615 (+)
AMCG00009104 NA other upstream 3416740 25489711 ~ 25493573 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other downstream 2064 28928892 ~ 29011768 (+)
AMCG00009208 NA other downstream 176780 29103608 ~ 29108227 (+)
AMCG00009220 lsm2,LSM2,smx5 other downstream 244495 29171323 ~ 29174731 (+)
G55573 NA other downstream 981083 29907911 ~ 29911564 (+)
G55591 NA other downstream 1068298 29995126 ~ 29995438 (+)

Expression


Co-expression Network