AMCG00009209


Basic Information

Item Value
gene id AMCG00009209
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29020638 ~ 29023928 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009209
GTCTGCTTCAGATCCTGATCAGGAAGGGAATAGAAGAGCGGCCTCTTACACATGCAAGGGCATATAGGGGAGAGGACTGAcagttgctgtgtttttgtttttatgtagtgGTGTCTATTTTTGAAGCTTTTATTCTGTTTGAACTTGAATGAAGACGCATATTCCGTAAAACCAGTGATATCCAATTGACATATTCTCATCCTACCTCTGCCCCTGGTGAGCGATGGTCCTGTGTGAAGAAATAGAGTGCGGGGTCTGCTACCTCCCCTATTCCCGCATGGAGCGAGTGCCACGGGTCCTGCACTGCCAGCACACCTACTGCGCCAACTGCCTGAACTCTATAGCCGAAATGAAGAGCAGGCTGCTGACTGTCCGCTGTCCGCTGTGCCGCCAGATGACCTGTGTGGACAGAGGGCTGGAGTTGCAGCAGGCACTGTGGGTGGACACCAAGATCTGGGACCAGATTCCTGAGAGTGAgcgagaggaggaagaagaggaggaggacgaggatgAGGAAGACAGAATGAGTCAGTCAGCAACACAGCCTGAACGACCTGCACCTAGACACTCCAGACCGAAACTCAAAAAGCTGAAGATCCCCACCTTTTTTAAGAAACTCAATTTCTTCAAGCAGAGCGAGAGAACAGTGCCAAAGTGCAATATTGAGATTAAGTCCTGGCGACGGATGCCATTTGCAGAAGTTTTTTAAGAAGATTTTTACAGAAGGAAAAGCAAATGAAAGAATGGCAGTATTACACCACACGAGATAATGCTTTAGCTAATGtaattaccccccccccccacacacacacacaaacaaaacaaaaacaacaacagattacattttttagtttGACTACCTTCAATGAAGTCTAAAGTACTCATCATGTGCCAGATTTATGCATTTTCTATATGGAGTCAAATTAGAAGGGGGGAAATTTAAAACCAAATGAGAAATAATCCAAAGTAAtgtaacaatttaattaaatatggaaattaTTCAAGTAGACTTATAGACTTTTAGACTTATaactgcaattattttatacCCATATCTCACCATAAAACAAGTGTTTTAGTCATGGcactgtgaaaagaaaaatttATCTGATTTAACTTTCATGTTCaaacacaatttgaaaacagAAGACTTTGCATTGACATTGACTggttgtagtttttttgttttttataatgctTGAACCCAACATGTTTCCAGCTGCATTATGTCCCCTCATCCTAATCATCCATATAAATTAAGCATAAGAATCATGCCAAAATAAGTTCCTTTTATCAGACAATACATGAatacaaccaaaacaaagaaaaacatgaagtataatttctcttctcttttggAAGGGAAGATTGTTTGCAGAGTGAGTCCCcctacaaacataaaaaagtgttttcccaCCTAAATTTACAACTCCTTTATGAAAAGGATGCCTAAAATGGAATACATTGTTACTGAGTTGGAACGGTTCCATACAGGAACTGAGGGACTAGTGGAACAAATGATATTGTATACGGGTtgcatgtattatatttattccatTGGGTTCTCTCAACTTAATCCCATACAGCTGGTGGGATTTGATTTGGTTCAGCTGTTCTGACAGACTCTTCACCTAACTAACATATTCACACCAGATGGTTTCTGTATGCATTTGCCTAGGAGGCTCATACATCTGAAACTAATtctattgttgttattgtgttttttatacttttgtttttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009209 True 1741 mRNA 0.40 4 29020638 29023928

Neighbor

gene id symbol gene type direction distance location
AMCG00009196 NA coding downstream 371565 28643287 ~ 28649073 (-)
AMCG00009195 NA coding downstream 380027 28632355 ~ 28640611 (-)
AMCG00009194 LOC106560660 coding downstream 389687 28627412 ~ 28630951 (-)
AMCG00009193 NA coding downstream 404500 28610870 ~ 28616138 (-)
AMCG00009197 stk25b,stk25,LOC107585675,LOC107722570,LOC107693719,LOC107589848 coding downstream 420796 28582225 ~ 28599842 (-)
AMCG00009212 NA coding upstream 5381 29029309 ~ 29052524 (-)
AMCG00009213 NA coding upstream 39835 29063763 ~ 29089403 (-)
AMCG00009211 NA coding upstream 66127 29090055 ~ 29103281 (-)
AMCG00009210 NA coding upstream 96487 29120415 ~ 29135151 (-)
AMCG00009216 NA coding upstream 139345 29163273 ~ 29171791 (-)
G55359 NA non-coding downstream 126755 28843473 ~ 28893883 (-)
G55333 NA non-coding downstream 265005 28755298 ~ 28755633 (-)
G55326 NA non-coding downstream 292668 28721540 ~ 28727970 (-)
G55268 NA non-coding downstream 514842 28488651 ~ 28505796 (-)
G55153 NA non-coding downstream 1149377 27871002 ~ 27871261 (-)
G55404 NA non-coding upstream 31785 29055713 ~ 29057241 (-)
G55488 NA non-coding upstream 434687 29458615 ~ 29458827 (-)
G55551 NA non-coding upstream 735599 29759527 ~ 29762165 (-)
G55610 NA non-coding upstream 951701 29975629 ~ 29976269 (-)
G55648 NA non-coding upstream 1212231 30236159 ~ 30236395 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 630542 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 1402466 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 1684907 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 1867163 27110996 ~ 27153475 (-)
G54821 NA other downstream 2223984 26793541 ~ 26796654 (-)
AMCG00009215 gpr17 other upstream 34013 29057941 ~ 29063030 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 637032 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 954009 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 1225943 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 1575546 30599474 ~ 30657612 (-)

Expression


Co-expression Network