AMCG00009210


Basic Information

Item Value
gene id AMCG00009210
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29120415 ~ 29135151 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009210
ATCAGCGCTCAGTTCTTTATTAGCGCTGGGAGCCGCAGCCGGGCGCAGTCCGCGCAGGCATTACAGAGGAGTACACACGCACAACTGTGCCTCTACTTTCAATGAGCAAATCTAGGATTACTTTCAATAATCCGGAATCCAATCCACATAATCGTCGCGCACGGTTTGCCCGTACATGAACTGGAATGAGACTGTGAAAAGGTTCACAGCCACCCTTTGACTTCATCCAAGATCTTAATTTATTACTACTTTGCTCACCCCACATCTACAATGAGAACAGCAGAGGAATCGTCCAGCACGGTACTTCACCGGCTAATTCAAGAGCAGCTGCGCTACGGGAACTTGACAGACACACGCACCCTGCTGGCCATCCAGCAGCAGGCTCTGCGGGGAGGGGGCAGTGGCGGGGGTGCTGGTAGCCCCCGTTCTTCTGTGGAGAGCCTGACTCAGGAGGAATCCCAACTACTGCAGCTATCTGCTCGGCAAGAGCCCCAGGGACAGGAACACCAGGGAGACTACCAGCACTCAGAGAGCTCTTTGCGACACCTCTACCAGCTCCACGGTGAGGAGCTACCAACCTATGAGGAAGCCAAGGCCCACTCCCAGCTCCTAGCATCGCAGAGAGGCCAGATGGTTTATCACCATATTATGCCAGATTCTGCTGTTTTGGAGAGTGTTAGCCATCATGATGATGGACTCAAGGACCTGAAGCATGGCCACGTACGATCCCTCAGTGAGAGGCTAATGCAACTCTCTTTGGAGAGGAATGGAGCAAAGGCCAACATGGCTATGAGCTCTTCACACAGCTACCCACAGCTCTCCAAGTACCACGTCCACCATGTCCCCCATGGCAGTCAGGGGTCCCAGCACCACAACGACCACCGGGGCCCCCCTCCGGAATACCCTTTTTTGGTCAAGTCTCCCGGATATATGCTCAGCCATTCCCAGGAGCATGGACACTACTACAACGAGCCAACACCATCTTTCCACTCTCAGTCTCACAGGTATCTACAGGCCCAGCCACAGATGTCCCGTCACAGCCCCCTATCCACACTGACCCCTGCAGGAATGGAGGCGTTCATGGCAGCTCAGAACACCTCGGCCAGCAGCCATGTGGCACAGATGGAGATGTTGATGAAGGAAAACGAGAAGCTGAGGAGGGAGCTGGAGGGCTACAATGAGAAGGCAGCCAGGATCCAAAAGCTTGAGATGGAAATACAGAGGATATCTGAAGCTTATGAAATTCTCATGAAGGGATCTGCCAAGCGTGAGACCCTGGAGAAAACCATGAGGAACAAGCTGGAGGGAGAGATCAAGAGGCTGCATGACTTCAACAGGGACCTCAGAGACCGCCTGGAAACTGCAAGCAAACAACTAGCTGCTAAGGAAGTTGAAGCTGCAGACCAAAACCAGGACACATTGGCCAAACTCCTAGAGCAAAGTGAGGAGCAGCAGTGTGAGAAAGCTCGTCTGGAGAGGGAGGTCTCGGTGCTGCGTGGCTCTTGTGACGATCAGCTGCGGCGGCTTGAGCTCATGGACCAGGCCCTGACCAATGCACAGTCCAAGACAGTCCAGCTGGAGGGAGAGCTGCGCAGGAAGCGAGCCTATGTGGAGAAGGTTGAGAGGCTTCAGCACGCCCTCTCCCAGTTGCAGGCCGCTTGTGAAAAGCGGGAGAAGCTGGAGCAAAAACTGCGAACACGTCTGGAGCAGGAGTTGAAGACGCTGAGAGCACAGCAGCGTCAAACCAACAGCCAGGGCTCTGCCTCTCCGTCGGAGCTGAACGCCTTAGCCTTGCAGGAGCGCCTGCGAGAGAAGGAGGAGCGCATCTTGGCCCTGGAGGCCGACATGACCAAGTGGGAGCAGAAGTACCTGGAGGAGAGTACCATGCGGCAGTTTGCCATGGACGCGGCTGCCACTGCAGCTGCCCAGAGGGACACTACCATCATCAACCACTCACCCCGGCACTCGCCCAACAACAGCTTCAATGAAGACCTGCTGACAGCCAATCACAGGCACCAGGAAATGGAGAACCGGATTCGTGCCCTGCATGCTCAGATTTTGGAGAAAGATGCTGTGATCAAGGTCCTCCAGCACCGCTCACGTAGGGATCAGAGTAAGGGGGAGCAGCAGGGCCTTCGTCCTGCCAAGTCCGTGCCGTCCATCACTGCAGCAGCCAGCAGCTGGCCGCAACCTGGCCTCCAGGTCCCTTCTGAGAGGCTGGCAGACCGGGTACAACGAGGAGGGAAAGTGAAAAGCCGCTCGGATGACCGCACAGCTGCACCGTCTCctgcctctctgtctgcctTGTCCAAGCACTGCAGCCAAGACGGCAGCACCCAGACGGAAAATGCCTCGCCGGAGTCTTCCACTACTGCTGAGTTTGCTGCCACTGAGGACCCCAACCCTACACCCATCTCTGATAACTTGGAACAACTGGGACCCTTCAACACGTACAAGAGCTTGGACAATTCAGAAGGAGAAGTGATTGAAATTCTTATCTAAAGAATGCCATTGGATATTTGGATGAAAGTTGCTTTGGGTCAGCCATCTCCAGAGAAGAATGCTGCCCTCACGCTTTTTATTAATAGAAAGAATCTATCTCAAGTGGAACTGGGGTTCCAAAAGAATCATCTGAAATGGATGCCTTTTGTGGAAGTGAAAAAGGACAAATAAGTTCCAGAATGCAAAAAAAGGACTGTAGTCTTGCACCGAAGGGGAGCTGAGCTTTTCTCTTGTGCTGATCTACACAAAAAAGGACCTCCATTTGTTATGCTATATCTTATCTGCCTGGTGCAAGAGATGCTGTGAATCTTTGAGGTACTTTGGACCGTATTTCACACAGTTGCAAATGGCAGCTGAAAGActgtaaattgtatatattacttttttttttttttaccaagaaacaatatttatacTATAATTGCTGCTTcttgtgtgagagagtgtgtgtgtgtgtgtgtgcagagtgCTGTCTTTGCAGTACATTATTCTGGCTTTTCAAAGTATTCCTGagtgtgtattttaatcttGTCTTATTACCCtttcttttataaatgtatctaATTTATATGTGTCAGCTTGTTCAACAGCTCAGAAGTATCTGTACTGTTCATAAATGTCATTTCATGCATTTACATGAAAGATATCCCACATTCCCTTGTGACTGAAATACCCTTGCCACCATTTTTGCCAAGTCTTAGTCATTTTGGCCACATTCTACCACTTTTCTTAAGTTGTGAGACATGATTCAGTTCATCTGAAGTtcttaagttttgttttatgaaacttCCTATGTGGTCCACAGCTTTAAAACATTCCATTGCTCAAGAACaacaccatatatatattgcacataAAAGGCAAAAAAGTATACCACCTATGATTATTCCTTGAGGTGGTGGTCAGTTTTAGCTTTCTCTACTTTTGTTTTGACAAGGGCAAGCAaggaaagtttgttttttttaactcaagGACTCTGTTGTTTTCTAATCGACTCCTCCAGTATAGCAAACCATCAAATTGTGCTTGTGCATCATACCCTCAAGTATTTATGACACAGAGAGCATGAGCAATGCTTTAAAGTTGGAGTTTGCGGCTCCTTAGGTCATTTGTGGATGAACTGAGGATTCCGCTTTCTGGAAAGATTGCTTGCCTTTCCAGAGCCCTAATTTTTCAAATACCATTGGAAAAAACAGTTATCAGAGCTCTCCCTGTTTCTGGCAAGCCGAAGCTGATGTGTTGAAATTCTTCTTTGATGGAATGTATCATGGGTGAGGGAGGCATTTGTTGTCTGACCCCCTTTTGAATTGCAAGCATTTTGGAGACCATTAAGTTTATAGACCTATTCATCTTCCCTAAATTGCAATGGCAGGCTTAGCCCGAGGGTTTCTTAATCAAAGTGCTGTTGCATACAGTAATTCAGGAGGCCTCCTGAGTCTCTGGCCTCCATTCACATGAATCTATACTTACCCTACTTTGGTTTCCAATCACAATATTTTTGGAAAGTCACAGAGACAAACTTGTTAGTTTGGACTAAAGGGTGATTGGTTATTTCTAAGACTTCCATATCGCTGAGAACTTTAATGATGCTCTTCGCTGTCCAATTTGCGTAACAAAAAGATCTGGAAAACTCcatatataatatttctgtCACTCTTCTCTATcatttatcaatgtatttgaaaCACCATCTCAGTGTATTAAAAGGCCCTTTAAAATGATATGgagtgagagaaaaaatactgtaatctCTCTATTTCTGTCCtgtctgatttttattttccagtgtaATGCATATGCTGGTCAGTGCTTTGCATTGAAAAATTGTCTGCTTATCTTttcttgttgatgttgttgttttttattcttgtttgggctttgtttacaaaaaaactatataGTGAACTAAGAGaacttaatatattttgtataaatatttgtattctttaagtATTTAGTGCCATAATGCCAAAGATGATTTGCATTACTATTAAGTTATAACAAAGTGTAAAAAGCAGCTTGGTAATCTGATGCTGCGCAATACAATATGGTTTGCCCATACCTAGATGTTGCTGTGAACTTGTATGTGGgagttttgtattgaaatgtcagacacatttcattaataaaataaaaccttaatatatatata

Function

GO:

id name namespace
GO:0046847 filopodium assembly biological_process
GO:0016477 cell migration biological_process
GO:0009880 embryonic pattern specification biological_process
GO:0001525 angiogenesis biological_process
GO:0030866 cortical actin cytoskeleton organization biological_process
GO:0060026 convergent extension biological_process
GO:0001935 endothelial cell proliferation biological_process
GO:0051649 establishment of localization in cell biological_process
GO:0005768 endosome cellular_component
GO:0005938 cell cortex cellular_component
GO:0005515 protein binding molecular_function

KEGG:

id description
K06104 AMOTL; angiomotin like

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009210 True 4654 mRNA 0.46 11 29120415 29135151

Neighbor

gene id symbol gene type direction distance location
AMCG00009211 NA coding downstream 17134 29090055 ~ 29103281 (-)
AMCG00009213 NA coding downstream 31012 29063763 ~ 29089403 (-)
AMCG00009212 NA coding downstream 67891 29029309 ~ 29052524 (-)
AMCG00009209 NA coding downstream 96487 29020638 ~ 29023928 (-)
AMCG00009196 NA coding downstream 471342 28643287 ~ 28649073 (-)
AMCG00009216 NA coding upstream 28122 29163273 ~ 29171791 (-)
AMCG00009217 NA coding upstream 52385 29187536 ~ 29197143 (-)
AMCG00009230 NA coding upstream 437918 29573069 ~ 29587854 (-)
AMCG00009228 NA coding upstream 501840 29636991 ~ 29641912 (-)
AMCG00009232 NA coding upstream 570182 29705333 ~ 29705803 (-)
G55404 NA non-coding downstream 63174 29055713 ~ 29057241 (-)
G55359 NA non-coding downstream 226532 28843473 ~ 28893883 (-)
G55333 NA non-coding downstream 364782 28755298 ~ 28755633 (-)
G55326 NA non-coding downstream 392445 28721540 ~ 28727970 (-)
G55268 NA non-coding downstream 614619 28488651 ~ 28505796 (-)
G55488 NA non-coding upstream 323464 29458615 ~ 29458827 (-)
G55551 NA non-coding upstream 624376 29759527 ~ 29762165 (-)
G55610 NA non-coding upstream 840478 29975629 ~ 29976269 (-)
G55648 NA non-coding upstream 1101008 30236159 ~ 30236395 (-)
G55703 NA non-coding upstream 1345628 30480779 ~ 30483373 (-)
AMCG00009215 gpr17 other downstream 57385 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 730319 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 1502243 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 1784684 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 1966940 27110996 ~ 27153475 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 525809 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 842786 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 1114720 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 1464323 30599474 ~ 30657612 (-)
G55878 NA other upstream 1799413 30934564 ~ 30937251 (-)

Expression


Co-expression Network