AMCG00009213


Basic Information

Item Value
gene id AMCG00009213
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29063763 ~ 29089403 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009213
ATGACCTCAATTGCAAAAGAGTGCAGAAAGGAAAAGCAAGGActtgggagaggaggggagaagggggaatgtcTGTGCACTGTCATGGACCAAAAGAAGGCAGCTGGTTGGGGAGAGGGGGACTTTGTGTGGATAGATTCAAGTTGCGGGGTTCGCATTGGAGCAGAAGTTTGTCTTTCAGACACTGGACAAATCAAATTGATTGACGATGAAGGAAAGGAACACTGGATCAATGGAAAGAATAAGGATTCAATCCGGCCCATGCACCCCACCTCCATTAAGGGAGTGGATGACATGATCAGGCTGGGAGACCTCAATGAAGCTGGAATCCTCAGAAACCTTATGATTCGTCACAAGGAAAACATCATTTATACCTACACAGGATCCATCCtggtggcagtgaacccctacCAGCTCTTGCCTCTATATACAGCAGAACAAGTGCGACAGTATACTAACAAGCGCCTCGGAGAGCTTCCTCCTCACGTCTTTGCCATTGCCGACAGCTGTTTCTTCAACATGCACCGCAATCGCCGAGACCAGTGCTGTATCATCAGTGGAGAGTCAGGAGCTGGGAAGACTGAGAGCACTAAACTGATGCTACAATTCTTGGCAGCAGTCAGTGGGCAGCACTCCTGGATAGAACAGCAGATCCTTGAAGCAAACCCCATTCTGGAAGGTTTTGGAAATGCCAAGACGGTCCGAAATGACAACTCCAGCCGGTTTGGGAAATACATCGATATCTACTTCAACAAGAGCGGTGTCATCGAGGGCGCCCGAGTGGATCAGTACCTGTTGGAAAAGTCTCGCGTCTGTCGTCAGGCTCCAGAAGAAAGAAACTATCAcatattttattgcatgttgCTGGGGATGACTACAGAGCAGAAAAAGACACTTTGCTTGGGAAATGCATCGGAGTACAACTACCTTATGATGGGACACTGCACCAGCTGTGAAGGGCGGGATGACATAAAGGAGTATGCCCACATACGCTCGGCCATGAAGATCCTTGCGTTCAGTGATAACGACTACTGGGAAATCACCAAACTGCTTGCTGCTCTCCTGCATCTGGGAAACATCGATTTTGAAGCTACTGTCTTCAATAATCTGGAGAGCTGTGATATACAGTCATCTCTGCATTTTACCACAGCTGCCAAGTTACTGGAGGTGAATGCCAAACCTCTGGAAGCCAGCTTGACAAACCGCTCCTTCATGACCAACGTAGAGAGTGTCTCCAAACCTCTCAGCTTGGAGCAAGCAGTGGATGGAAGGGATGCTTTTGTTAAGGCAATCTATGGCAAACTGTTTTTATGGATTGTGGACAAAATCAATAATGCCATTTACAAACCACCTTCAGTTGATCCCAAAAGCATCCGTCGATCCATTGGCCTTCTGGACATCTTTGGATTTGAGAACTTCAATAAAAACAGAGGAGGAGAGCcattttcccaaggtaaacCGGCTACAGACAAGACCATGCTGTCCAAGATAAACTCGGTGCATGGCCAGAGTAAAATCTATCTGCCCCCTAAAAGCTCCCATGATATGCAATTCGGGATCAAGCATTTTGCTGGGGTAGTCTACTATGATGCCAAAGGTTTTCTGGAGAAGAACCGCGATGCCCTAAGTTCTGATATCATCCAGCTGGTGCAGTCATCCACCAACAAACTCCTCAAGAAGATCTTTGAAGCAGATCTCGGTTCCCAAACAATAAATGTGAACCCAAGGATGATAATTACTCCTAAAAACTCTCTGAAGGCCATGGACAACCGAAAACGCGTGCCTACCCTCAGTGGCCAGTTCCGCCAGTCTCTTGACTCCCTCATGAAGACACTTACCGTCTGCCAGCCTTACTTCATCCGCTGCCTGAAGCCCAATGACTTCAAGAAACCAATGCTGTTTGACCGGGATCTATGTATGCGTCAACTACGTTATTCTGGGATGATGGAGACCATCCGAATCCGAAAATCAGGATTTCCCATCCGGTACACGTTTGATGAGTTCCTAGATAGGTACCGGGTGCTTCTAAGGACAATCGTATGCGACCCAAAACTGGAAGCAGCAGAAAAATGCTGTGACTTCATCTGTGACACTGTCCTCAAAGAGGGAGACTGGAAAATCGGCAAAACAAAGATCTTTCTCAAGGATTTCCACGACACAACTCTGGAACTGGAGAGAGACAAAGCCCTCAATGAAAAAGCTCTACTCATACAGAGGATCCTTCGAGGATTCAAGCATAGGAAACGCTTTCTGAGACAGAGAAAAGCAGCAGTGGTTCTTCAGAAGACCTGGCGAGGATACAAATGCAggaaacagtacagagtgGTCCAGCTGGGCTTCGCTCGCTTGCAGGCTCAGTGCCGCAGTCGGCAGCTCGCCCACCGCTATCAGCAGATGAGGACAGCTGTGACTCTGCTGCAGGCCCATTGCCGTGGTCACCTGCTACGGAAGGAATGGAGCCGTAAGACAGAGGCAGTGAAGGTGCTGCAGCGCCACACTCGAGGCATGCTGGCCAGGAAGGCCGTTGCCAGGATGAAGATAGAAGCACATCTGTCTGCACAAGAGATCCTTGCTCAGGAAATGGAGAGGCGGCGCCGACAAGAAGAAGTCCTTAGCAAGAAACGTGAGGCCAGCTCAAAATCAGAGTCCATTAGCGACCAGGAAATGGTGGACAACATCTTTGGCTTCCTGCCCAATGTTGTTGGTGGGCAGGAGGGACAGGCACCTACTGGCTTTGAGGACCTTGAGGGGAAGCGGGCCAAGCTGGAGGAAGTGGATCTGGATGAGATACCCATAGTGGAAATTCCCCAGGAGGAATACGATGATCTGGATGAATATTCCTTCTCCAAATTTGCATCCATGTACTTCCAGGGCTCAGCAACGCACACGCACATCCGCAAGAGACTTCGCAATCCTCTTCTCTTCCATGAAGATGAGGGTGATTCTCTGGCATCTCTCACGGTTTGGTGGATCATCCTGAGGTTCATGGGTGATATTCCTGAGCCCCGGCAGCAGGCTCCGGAGAAACCGGATATTGGAAAAAAGCCGATCCAACAGAACCTGGGGAATCGACAGGGCCGGCGCCTCAGCAATCTGGTTGGGCTCGAGCAGAAACTGTTAAAGAGAAATAGAAAGTCTGCAGACGGGACTCGGAGCAGGCGGACCATGGGGACAGTGttggaggagCCTGAGATGCAGACTgtgaaggaggaagaggatgtACTCATTGGAGAAGGACCTACCTTAGATCGACCGATGAGTCCTTTGGAAAAGCTGCATATTATCGTAGGATATGCCATTCTCAGACGAGACCttagGGATGAGATCTACTGTCAGATCTGTAAGCAGCTCTCGGAGAATGGGAACCGCAACAGTTACTTCCGGGGCTGGATTCTTCTCTCCATTTGTCTCGGGATCTTCCCTCCCTCTGAGCGGTTCCATAAGTACCTCCAGAGCTTCATTCGGTCTGGTCCCGTGGGCTATGCACCCTACTGTGTCGAGAGACTGCGGCGCACACTTGCTAATGGAGTGCGTGGGGAGCCCCCTAGCTGGATGGAGTTGCAGGCCACCAAGACCAAGAAGCCCATAGTGGTCTCGGTGACCTTGATGGATGGCCGGAACATCAGTCTAGCACTGGACTCAGCATCTACTGCTGCAGAGGTCTGCCAGTGCCTTGCCCAGAAAATACAACTTAAGGACCTCTTTGGATTCTCCATCTACATTGCTCTCTATGAAAAGGTATGGTCACTGGATGGCGGTAAAGACCATGTGATGGATGCCATTTCCCAATGCGAACAGGAGGTAAAACGCAAGGGTGGTCAAGAGCAGCATGCCCCTTGGCGTCTGTATTTCCGAAAAGAGATCTTCACCCCCTGGCATGACTGCAGCATAGACCCGGTCGGCTCTGACCTCATCTAcagacagatcattcgtgggatCAAATTTGGCGAGTACCAGTGTGACAAGGAAGATGATATGGTCGAGCTAGCTACCAAGTACTTCTATTTGCAATATGGTTCAGATAATGGAGGAGACAATGCCAAGAAAGTGGTCCAGGACTGCATCAGTAACTCACTAATGGCATCCAAATCAGAGGCCAAATGGGTACAGATGGTTAGTGCTGCACACCTCAAGAGTCCTTACGTCCACTCAAAAATTCATCCAGACACTGTAAAAGCTGAGGTGGTTGATTTTGCTCGCATGAAGTGGCCTATACTCTTCTCCAGGTTCTTTGAGGTTAACAAGTTTTCAGGGCCAACTTTACCCAAAAACAAGTTCATCGTTGCAATTAACTGGACTGGTATATCTTTCCTGGATGAAAAGGAGAGGAAGCTTCTGGAACTTTCCTACCCTGAGATCATTTCAGTCAACACAAACAGAGCTGCCAATGGGATTGGACAAACGGTCTCTCTGAGTACACTGAAGGGTGATGACTTCACTCTCGCCACAAGCAACGCTGCGGATATTTCAGACCTGGTGCTTATGTTTCTAGATGGACTGAAGGCACGATCACAGTATGCTGTAACATTGCAGGAAGCCAATAGACAAGATGACAAGACCTTCCTGAACTTTAAGAAAGGAGAGCTCCTAGCTCTGCTCAAAGACAGTGACTTTTCTCAAGACCGTGGGTGGGTTAAAGGCAAGAGCGAGCGAACTGGTCAAGTCGGAGCTGTCTCTACTGATGCCCTCTACATCCTGCCTACCCTCACAAAACCCACTAACGAAGTGCTGACCCTGCTGACGCTGTCTCCAGAGCAAAGGAAGTCAATGGCACAGACTGCTCAGAAGGAAGAAATCACGAATGAACTCCGGGTGGCTCCCATCTCCCTGAAAGAATTTTCCTTCGAGTACTTCAGACAGCCCACCAAGGACAACATAAATCGTCAAGTTTTCTCGAagggtggagggagggagaagatcTGGGCCAACTCCCGGGAACCCATCAAACAGCCGCTGCTGAAGAAACTGGCATGTTATTATTGTGATTCCACCTTAACGCTGCCTCTACCCATCTTGAAGTACATGGGAGATTACCCCACCAAACAGGCGCGCAGTCCTCTGGAGCTCACAGACCAGATCTTTGGCCCAGCAACACAGAATGAGGCTTTGAGAGATGAGGTCTACTGCCAAATCATGAAGCAGATGACAGACAATAAAAACAGGTACAGCCTGGAAAATGGCTGGCAGCTGCTCTGGCTATGCTGCGGTTTGTTCCCCCCAAGCCAGGCTCTGCTGAAGCACACCCAGCGCTTCCTGGAGTCTCGACGCCGGGAGCCTTTGGCCTCTGACTGTCTGCAGCGGTTGCAGGGTTCTCTGAGGATGGAGCCACGGAAACTGCCCCCTCACCAGGTTGAGATTGATGGCATTCAGCAGATGAGCACCCAGATCTTTCACAAAGTGCACTTCCCCAATGACTCAGAGGAGATATTTGAGGTGGGAACCAGTACCAGAATTCGCGATCTCTGCCATACCATTGCTGCACAGCTGAAGTTGGTCTCTTCTGATGGATTCAGCCTTTTCTTGAAAACCCCGGATAAAGTACTGAGTTTGAATGAGGCTGACTACTTCTTTGACAGTCTCAGACAAATAACTGACTGGACCAAGAAAACTAAACGAGTGAAAGATGGAGTACCAGTCAGTGTGCCCTACCTGGTTTTCTTCATGAGAAAACTGTGGTTTAATGTGTCTCCTGGAAAAGACGAGCTGCCCAAATACCTGCGTGGATACCACAAGTGTGAGAAGGACGATATCATTAACATTGCTGGCCTTATATACAAAGTGAAGTTCAACAATGACAAGTCGCAGTTTGTGATGATCCCCAAGATTCTCAAAGACCTCATTCCCAATCACAAGCTCAAGCTCATGTCTTCTGAGGAATGGAAGAAGaacatAATTACTTCGTTTAACAACCATGCCTCCAAGACTGTGGACGAAGCAAAAGTGGCCTTTTTGAAAGTAATCTATCGGTGGCCTACATTTGGTTGTGCTTTCTTTGAAGTGAAGcaaACATCTGAACCAACATTCCCAGATATCGTAATGATCGCTATCAACAAACAAGGAGTGACTCTTCTCCACCCAAAAACCAAGGATGTGCTGGCTAATTACCCGTTTAACAAAATAGCAAACTGGTGCAGTGGGAGCACCTACTTTCACATGACCATTGGTAACCTTGTCAAGGGAAATAGGATTCTCTGTGAGACTTCACTGgGCTACAAAATGGATGACCTTTTGACCTCCTACGTCACAATGTACCTTAATGAGAGGAACATCCTCAAACCCAGGAGTCACCGCTTTCCTGCCTGAAGTGCATTGGGGATAAAGTCCTGCTGAGAGACAAAGGCAGTGACTAACAATGCCTTTCAGCTTCTTGTGCcagttttaaaacattcttGATCAGCAGGGATAGATTTGCAATGTATGGATGAGTACAAGAATTTAGAGTGTGAACAAATGCATGCTTCCTTTCAGAATCAGAGGGGAGCTTGTGCATTTCCATATTTAAAGGATAATGCTCCCATACTGCTAATCAAACTCTGCTGCCTGaaacaaatcaaagtaaaaTCAATTTGACAGTAGTATgaccaaataaattaaaaggataattaagaaagaaaaacaatccctatttattttacagacaagaaacaacacaaattatacattttattatagtaGTTTACTCGTagattgttgtttcttttttttgtatgtaactTTTTCCTCAAGGTAATTACctttaatgtgttcattttcattttaataattgaaaaatgggGTGGTCAGACTTCAACTTCAACaaaatatctatttattaatttaacagaaCTGAACTATTTTCATCTGTGTTAAAAAGAGCCTTGTAGTTTGCAGTGACTGACTGTTGATATTAAAATGGTGGATTCCTTACTCCCTGTGTAGTTTCTTCAATCCAGCGGTTTAGGGAGTATAGCATATCTATTGAACTCGGAGAAGTGACAATAAATGTGATTGCAACGGTTTAAGAGAAAGGTACAAAGCTAGGTCAGGTGtgtaacagatttatttatttgttttttgtttttcgtttgcCCACCATGCCAAATACACTTGTCTACTTACATCGGAGAGAGCATTCAGGTAGCATTGGTTGTCAATCGTTTCACTCCCTACATTTTCACATGAAATTATTGTTTCACCTTGTTTTCtcgttgttttttttgtttagttttttcttggcatctgttttcaaaaaaataacattccagAACAAATGTTTAAAGTTGAATTGTGGCCAAATGCATAGCCGTACACTTTGTGggaaatttcaataaataattaccaaacacacacactttttgttGCTGCATAAATTGGAAGGACCTGTAAAAGGGGTTGAATGTAACATCTCTAATTGGTCATTTACTATGTGTGATCACCTTACTTTTTTATagaaaggaaatattttgttctcatgtggaaaacaaaagcagaaaaatgcTAAACAtccttctgtgtttttctttctaacaGAGTATTTTTGAATTCCTGAGACTGTCTTGTTAGCTACAGTACTCTCAACCTTCTTCTGGATAGCAGATTGTGTAATGAGTTCCTGTTTTAGCTCTCCACTATGTGCAGAATATTCTGCTTATTTTCAGTAGCATTTTTGcttcgttttttttatttttacgtgcatttgagttgtttttcttttccattctcCTCATTTACACCTAATTTAAAACTTCAACCCAccccaaaaatgtaaattacaagaTGTGGTACATGATGGTTTCTTAATGGAACCCACCATCAGATATTGAGTTTGTCATTTGCATTTTAGAGATGGGTcaaaagtttgatttaatcttggTTATGTATTATGTCTCCTTCCTTAGTAAGTCTTTGATAATATCATTTTGGCACCAGggttaaagaataataattgtttcaaatgaaagtcATATTTCAGAACTATAATGAAAAAAGAATCAACAATTCTCTCTTTGCATtgcaattatcttttttttt

Function

GO: NA

KEGG:

id description
K10359 MYO7A, USH1B; myosin VIIa

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009213 True 8010 mRNA 0.45 47 29063763 29089403

Neighbor

gene id symbol gene type direction distance location
AMCG00009212 NA coding downstream 11239 29029309 ~ 29052524 (-)
AMCG00009209 NA coding downstream 39835 29020638 ~ 29023928 (-)
AMCG00009196 NA coding downstream 414690 28643287 ~ 28649073 (-)
AMCG00009195 NA coding downstream 423152 28632355 ~ 28640611 (-)
AMCG00009194 LOC106560660 coding downstream 432812 28627412 ~ 28630951 (-)
AMCG00009211 NA coding upstream 652 29090055 ~ 29103281 (-)
AMCG00009210 NA coding upstream 31012 29120415 ~ 29135151 (-)
AMCG00009216 NA coding upstream 73870 29163273 ~ 29171791 (-)
AMCG00009217 NA coding upstream 98133 29187536 ~ 29197143 (-)
AMCG00009230 NA coding upstream 483666 29573069 ~ 29587854 (-)
G55404 NA non-coding downstream 6522 29055713 ~ 29057241 (-)
G55359 NA non-coding downstream 169880 28843473 ~ 28893883 (-)
G55333 NA non-coding downstream 308130 28755298 ~ 28755633 (-)
G55326 NA non-coding downstream 335793 28721540 ~ 28727970 (-)
G55268 NA non-coding downstream 557967 28488651 ~ 28505796 (-)
G55488 NA non-coding upstream 369212 29458615 ~ 29458827 (-)
G55551 NA non-coding upstream 670124 29759527 ~ 29762165 (-)
G55610 NA non-coding upstream 886226 29975629 ~ 29976269 (-)
G55648 NA non-coding upstream 1146756 30236159 ~ 30236395 (-)
G55703 NA non-coding upstream 1391376 30480779 ~ 30483373 (-)
AMCG00009215 gpr17 other downstream 733 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 673667 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 1445591 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 1728032 27314317 ~ 27335731 (-)
AMCG00009148 NA other downstream 1910288 27110996 ~ 27153475 (-)
AMCG00009229 ccd50,LOC106613514 other upstream 571557 29660960 ~ 29704929 (-)
AMCG00009235 NA other upstream 888534 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 1160468 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 1510071 30599474 ~ 30657612 (-)
G55878 NA other upstream 1845161 30934564 ~ 30937251 (-)

Expression


Co-expression Network