AMCG00009223


Basic Information

Item Value
gene id AMCG00009223
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29528879 ~ 29529494 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009223
TCACCCCTGGCTTGTAACATTCGTCTCAttgagattgtttttctttctctctgtaatgGCAGATTGAGAGATCCGTCAGCCTGCTTCTCGTGGACAGAGAGCTCATTCCTTACCTCCATGTCTCAGTCCCAGTCATCACAGGCCAGTGACATCTTCAGCCAGGATGTCTTCAACCAGCTCCTGGGAATGCTGGACCAGTCTGCCTTTCATACAGTTCAGCCAATTGAGCTGAACTTCTCGGAGAGCCCAGTGCACGGTGCTGCAGGCAACACCATCCAGATCAGCATGGACTGCATTACCATGCACGACCGCGACAAGGAGGAACCCTGCGGGGTGAGTATGAATATCGGCACCGCTGAGCCCCTTGAGCCCCAGGGCCGGCCTAGagtttacacaaattaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009223 True 402 mRNA 0.53 2 29528879 29529494

Neighbor

gene id symbol gene type direction distance location
AMCG00009224 NA coding upstream 41724 29484543 ~ 29487155 (+)
AMCG00009225 NA coding upstream 58355 29461485 ~ 29470524 (+)
AMCG00009219 LOC100694679,LOC102204076,LOC108271779,LOC105925372,LOC102787755,LOC102295835,LOC101474685 coding upstream 109589 29416436 ~ 29419290 (+)
AMCG00009218 NA coding upstream 126653 29366638 ~ 29402226 (+)
AMCG00009221 NA coding upstream 219106 29308856 ~ 29309773 (+)
AMCG00009222 tp63 coding downstream 33614 29563108 ~ 29573053 (+)
AMCG00009227 NA coding downstream 119123 29648617 ~ 29653337 (+)
AMCG00009226 opa1,LOC107585173,LOC107722677,LOC107711112,LOC107582739 coding downstream 187533 29717027 ~ 29742605 (+)
AMCG00009231 her6,hes1,LOC107711114,LOC107680502,LOC107582845,LOC107722674,LOC107685314 coding downstream 329431 29858925 ~ 29860369 (+)
AMCG00009237 fam43a,LOC106573864,LOC102785697 coding downstream 479308 30008802 ~ 30009842 (+)
G55487 NA non-coding upstream 70136 29458421 ~ 29458743 (+)
G55463 NA non-coding upstream 340924 29186694 ~ 29187955 (+)
G55461 NA non-coding upstream 343695 29184921 ~ 29185184 (+)
G55394 NA non-coding upstream 497401 29029318 ~ 29031478 (+)
G55357 NA non-coding upstream 630186 28897976 ~ 28898693 (+)
G55512 NA non-coding downstream 111995 29641489 ~ 29641936 (+)
G55564 NA non-coding downstream 328801 29858295 ~ 29932152 (+)
G55586 NA non-coding downstream 446109 29975603 ~ 29976267 (+)
G55595 lsg1 non-coding downstream 464128 29993622 ~ 29994641 (+)
G55596 NA non-coding downstream 466069 29995563 ~ 29995870 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 354148 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 420652 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 517111 28928892 ~ 29011768 (+)
AMCG00009204 NA other upstream 729279 28766454 ~ 28799600 (+)
AMCG00009164 NA other upstream 1902868 27613583 ~ 27626011 (+)
G55573 NA other downstream 378417 29907911 ~ 29911564 (+)
G55591 NA other downstream 465632 29995126 ~ 29995438 (+)
G56060 NA other downstream 2632266 32161760 ~ 32165365 (+)
G56368 NA other downstream 4471302 34000796 ~ 34031445 (+)
G56369 NA other downstream 4486176 34015670 ~ 34018815 (+)

Expression


Co-expression Network