AMCG00009224


Basic Information

Item Value
gene id AMCG00009224
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29484543 ~ 29487155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009224
gagagaaggagaaggaatgCGTGTATACTGGGACCGGCTGAGGGAGCCTTCCTTCATATCTCGATGGAACCCCTTCAGCACTGACTACCCCTACTGTACTTTCACCTATCATCCCGTGAAGGATGCCAGCAAGAGGTTTGCCACTTTATGTGAGCTGCAGAACTTCAGAGAACAGCTGACTCAGGCTGCCCAGAAGGCTCATGCCAAGAAGCCGGTCCCAGGAAAAGCCAACGGGGTC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009224 True 238 mRNA 0.54 2 29484543 29487155

Neighbor

gene id symbol gene type direction distance location
AMCG00009225 NA coding upstream 14019 29461485 ~ 29470524 (+)
AMCG00009219 LOC100694679,LOC102204076,LOC108271779,LOC105925372,LOC102787755,LOC102295835,LOC101474685 coding upstream 65253 29416436 ~ 29419290 (+)
AMCG00009218 NA coding upstream 82317 29366638 ~ 29402226 (+)
AMCG00009221 NA coding upstream 174770 29308856 ~ 29309773 (+)
AMCG00009214 LOC106599142 coding upstream 382466 29075081 ~ 29102077 (+)
AMCG00009223 NA coding downstream 41724 29528879 ~ 29529494 (+)
AMCG00009222 tp63 coding downstream 75953 29563108 ~ 29573053 (+)
AMCG00009227 NA coding downstream 161462 29648617 ~ 29653337 (+)
AMCG00009226 opa1,LOC107585173,LOC107722677,LOC107711112,LOC107582739 coding downstream 229872 29717027 ~ 29742605 (+)
AMCG00009231 her6,hes1,LOC107711114,LOC107680502,LOC107582845,LOC107722674,LOC107685314 coding downstream 371770 29858925 ~ 29860369 (+)
G55487 NA non-coding upstream 25800 29458421 ~ 29458743 (+)
G55463 NA non-coding upstream 296588 29186694 ~ 29187955 (+)
G55461 NA non-coding upstream 299359 29184921 ~ 29185184 (+)
G55394 NA non-coding upstream 453065 29029318 ~ 29031478 (+)
G55357 NA non-coding upstream 585850 28897976 ~ 28898693 (+)
G55512 NA non-coding downstream 154334 29641489 ~ 29641936 (+)
G55564 NA non-coding downstream 371140 29858295 ~ 29932152 (+)
G55586 NA non-coding downstream 488448 29975603 ~ 29976267 (+)
G55595 lsg1 non-coding downstream 506467 29993622 ~ 29994641 (+)
G55596 NA non-coding downstream 508408 29995563 ~ 29995870 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 309812 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 376316 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 472775 28928892 ~ 29011768 (+)
AMCG00009204 NA other upstream 684943 28766454 ~ 28799600 (+)
AMCG00009164 NA other upstream 1858532 27613583 ~ 27626011 (+)
G55573 NA other downstream 420756 29907911 ~ 29911564 (+)
G55591 NA other downstream 507971 29995126 ~ 29995438 (+)
G56060 NA other downstream 2674605 32161760 ~ 32165365 (+)
G56368 NA other downstream 4513641 34000796 ~ 34031445 (+)
G56369 NA other downstream 4528515 34015670 ~ 34018815 (+)

Expression


Co-expression Network