AMCG00009232


Basic Information

Item Value
gene id AMCG00009232
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29705333 ~ 29705803 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009232
ATGAATAAGGCCACACAGGAGGACCCCAAGACCATGAAGACACAGCAGGAGCTGTTCCGCAGGGTGCGCAGTATCCTGAACAAGCTGACCCCACAGATGTCCCAGCAGTTGATGTGCCAAGTGACCGAGCTGACCATTGACATGGAAGAACAGCTCAAAGGTGTCATTGACCTCATCTTCGAGAAGGCCATCTCCGAACCCAACTTGGGTCCGTGA

Function

GO:

id name namespace
GO:0017119 Golgi transport complex cellular_component
GO:0099023 vesicle tethering complex cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009232 True 216 mRNA 0.54 2 29705333 29705803

Neighbor

gene id symbol gene type direction distance location
AMCG00009228 NA coding downstream 63421 29636991 ~ 29641912 (-)
AMCG00009230 NA coding downstream 117479 29573069 ~ 29587854 (-)
AMCG00009217 NA coding downstream 508190 29187536 ~ 29197143 (-)
AMCG00009216 NA coding downstream 533542 29163273 ~ 29171791 (-)
AMCG00009210 NA coding downstream 570182 29120415 ~ 29135151 (-)
AMCG00009234 NA coding upstream 202806 29908609 ~ 29927458 (-)
AMCG00009233 atp13a3,LOC106613657 coding upstream 224303 29930106 ~ 29955770 (-)
AMCG00009236 lsg1,LOC107573872,LOC107715771 coding upstream 285773 29991576 ~ 29998483 (-)
AMCG00009242 xxylt1,LOC106573863,LOC107718247 coding upstream 423985 30129788 ~ 30138314 (-)
AMCG00009243 xxylt1,LOC107715806,LOC106573863,LOC107718247 coding upstream 456617 30162420 ~ 30171530 (-)
G55488 NA non-coding downstream 246506 29458615 ~ 29458827 (-)
G55404 NA non-coding downstream 648092 29055713 ~ 29057241 (-)
G55359 NA non-coding downstream 811450 28843473 ~ 28893883 (-)
G55333 NA non-coding downstream 949700 28755298 ~ 28755633 (-)
G55326 NA non-coding downstream 977363 28721540 ~ 28727970 (-)
G55551 NA non-coding upstream 53724 29759527 ~ 29762165 (-)
G55610 NA non-coding upstream 269826 29975629 ~ 29976269 (-)
G55648 NA non-coding upstream 530356 30236159 ~ 30236395 (-)
G55703 NA non-coding upstream 774976 30480779 ~ 30483373 (-)
G55722 NA non-coding upstream 785435 30491238 ~ 30491980 (-)
AMCG00009229 ccd50,LOC106613514 other downstream 404 29660960 ~ 29704929 (-)
AMCG00009215 gpr17 other downstream 642303 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 1315237 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 2087161 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 2369602 27314317 ~ 27335731 (-)
AMCG00009235 NA other upstream 272134 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 544068 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 893671 30599474 ~ 30657612 (-)
G55878 NA other upstream 1228761 30934564 ~ 30937251 (-)
G55881 NA other upstream 1238564 30944367 ~ 30947211 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_038706 CABZ01085052.1 coding NW_003335386.2 KN150670.1 733 ~ 23795 (-)