AMCG00009234


Basic Information

Item Value
gene id AMCG00009234
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 29908609 ~ 29927458 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009234
GTGCCATGTGGCTCCCACTTCTCACGTGCATATATCTTGGAGTTCACTTCTGCGATGGATTCAGCTGCCCTTCTGATTGTATATGCCAAGAAAATGGCAATGCATTTTGCAGGGGAGAGAAGATCACTATTGTGCCATCCAATTTACCTATCAATACCACTAATTTGCAGATTCAGAAGACTCAGCTCAGAGAATTAACCATCGAAAGTTTTCATGGACTGCCTCATCTGCTGCGTGTTCAAATAAGCTTGAATCCACTAACGACCATAACTCTGAGCACATTTAACAATCTAACTGCCCTTCTATCTCTAATGTTATCATACAACCAGATCTCCAGTCTTCCAAGTGGTGTGTTCAGTAGCCTAGTTATGCTGCAGCAACTATTTCTTGGAAATAACAAACTAGACGTGATACCGCCAGATTTGTTTGACAACCTCACTAACCTGCTAGAACTTGACCTGAATAGCAACAATCTCAGGGTCCTTCCTGAAAACATTTTCCGCAGCCTAGGCAATCTGCAGTATCTTAACTTGGGAAATAACTCTCTGCAGACCCTCCCTGTGAACATCTTCTGGCCTCTCACCCAACTGCGGCAGCTTTATCTCTATAACAATAAGATTGTGAAACTTCAACTTGGAATATTCAAGAACCTCCAGAATCTTCTGGAGCTAAAGCTTTTCAAAAATATGATCCGGCAAATCCCCCCCAAATTATTCTGGCCACTGTCAAACCTAGAAATTCTCCACATGTCCTCAAACAACCTGAGCCATTTGCCTTTGGAAAGTTTTTTCCACCTGCCTCACCTCATCCAACTGAACATCTATAAGATCCCCCTGGTAGACCTACCAGAACGCTTGTTTGGAGAAATGCCAAAactcaaacattttattttgtactccACTGATCTTGAAACTATCCCAgggaatatatttattaatatgacaGGCCTGGAGTCACTCACAATTACCATTAATCAAAGGCTAAATTATTTACCAAAGGACACCTTTAGCGGTCTGACAAGCCTTCTGCAGCTTACTTTACATtctaacagttttttttctttggaacAAGACATATTTTCAGACCTATTTAACCTGCAGAGTCTTAATCTTCAAAGTAACAAACTCGGCACTCTCCCAaaagatatcttcaaaaacCTTTACAATCTTACAAATATTGAACTGCacaataacttatttaaaaacCTTCCAAGTGAAGTTCTAAAAGCAGCAGTTATGCTAAAAAACATCAGCCTAGAGAAAAACCCCTGGAATTGTAGCTGTGATATTGTGCAGCTTTCGGCCTGGATAAGGTCCAATAGATATAGGATCCGGAACTACAACCGTTTATTGTGTTATTCAccatcttatttaaaaaataagcatcTTGAGTCAATAACTTATGAAATGCTACAGTGCAGTCATCCCACTGTAGGGCCCATGGATCTGACATGCTGCTTATACATACTGGTCAGTTTTCATGTTGTACGGACTGTTCATGGAAACTGCCCAGATGAATGCTTGTGTCCGGACCCTAGAGTAGTGCGATGCTCTGGTGGCACTGTCACCAAGGTACCATCCTCCATACCAGCGGACACTGAACGTCTGGATATATCCTATACCAATATTACAATCTTTACCTCAAATGATTTCCATGCAATAAATGAGTCCTTACAATTTCTTATTGCCAACACACCTGAACTGACCGAGATAAAACCAGGGGCATTTGACAGCCTTACAAACCTCAAAGTCCTGCTTTTAACACAAACTAAACTACAAAAGATACCAACTAGATTGTTCAGAAACATGGTGAATCTTGAAAAgcttatattaaataaaaacaaactacaaaatatCTCACATGACATGTTCTCAACACTCACCAGTTTAAATGACCTCAATCTTGAGAAAAATCAGTTAAACTACATACCAGAAGGAGCTTTCAGCCAGCTTGTAAATTTACAAAGTCTCAGCTTGGCTTGGAATAATATCGCCAGCTTTTCccagaaaacatttcagaatctTACAACACTACGGTTTCTTAGACTTCAAAAGAATGGGCTCAGGCAAATCCCACCAGGCAGTTTTGACCACTTAGCAAACCTAGAGGAATTATCTCTACAAGGCAACCAGATCGAGCACCTGCCTGCTGACCTGTTCTCCAAACAACCGAACTTAAAGAAGCTGTTTCTGTCTAACAATCATATATCTAGGCTACCTGAGGGCATCTTCCTCAACTTGCCTGTCCTAAGTGATCTAACCCTTTTTGAGAACTGCCTGGTAAACATTTCCAGTGGTGTATGGGGTCCTATGCCCCTCCGAGAACTCTGGCTATACAATAACAAATTAGTTCACATCGCGGACAGAGCATTCAACAACCTGACCCAGCTACAGCTCCTGGTGCTGAGCAGGAATCACATCAGCACTATCTCCAGGGATGCCTTCAGGGGCTTGGTGGCACTGGGAGAGGTGTCTGTGCACACAAACAAGCTAACTAGCCTGGAAGAGGGAACCTTCAATGGACTGGTGGCTCTCCAGAACATCTCCctagaaaacaacaacttgaaGTCCCTGCCAGGAAACCTATTCCAGAATCTCCCCATTTTACAAAATCTTGACCTCCACAATAACTCCTTAGAGAGCTTGCCTCATGAGCTCCTCAACTCTCTAGATGCCATTACAGAAATAATTCTCTATGATAACCCCTGGAAATGTGACATGGACACCTATCCTTTGAGAAAATGGATGAAGTTGAACCCACTCAAGGTGTCCAGTATCACACAAACGGCTTGTTTTTCCCCAGCCTCACTGAAAGGTACCCCTATTGTAGATGTCAGAGATGAGAATGTCACCAGCACGACTGTGATAACCCAGCAATATTTCACCATGACCAGTACAACTAGAAGCACATTCACGCCCATCTTCACCACACCATGGAAAAGCAGCCCTTCACACAACAGTGGGGACAATGGCATTGAAAAGGAGAAGGGGGGAGGCCTAACAAAGGAAGCCCTAATCATCATAATCGTACTCATCTGCACAGTTGTTATTTCCAGTCTGAATACAATTGCAATTACAATGACCAGGGAATTTGCCATTGCCATATTCATATTGCTGCAGCTCTGTTGCCATGGTCACAGCTGCCCAACTAGATGCCAGTGCTTTACGCCAGCCAAAGTGTTCTGCTCAGACGAAAGCGTCAAACATGTTCCTGCCAACTTATCCTCAGATGTAAAAGAGCTGACAATAATGACAACAAGCGTGACCAATATCAAACCCGGAGATTTTGAGAGCAGTCCAAATCttacaaaaatcatatttgtcAATAATTTCATCGTTTCGGTGGCAGAGGGAGCTTTTGACGAGCTGACAGAACTGCAGGAGCTGGAGATAAGTGGCAACTACCGGCTTCATAAAATAGGTGTCGATGTTTTCAGCTCACTGACCAAACTAAAGAAACTGCTCATCAACTTCAATAAGTTCAGTACTCTGGAGAGCGGCATTTTCGATGAACTGCTaaacctggaaatcctgcaagTCAAAGGAAATTTACTAGCAGACCTTCCATATAATTTATTCAGTAAACTTCATCAGCTCCGTGTTCTGGATCTTTCACAGAATATGATATCACATGTCACCAAGGATTTTTTAAACGGTCTGACAAATCTAGAAAGCCTTTGGCTGAATGAGAACCTAATAGCCACACTTCAGTCTgatgtattttcaaatgttttaaagctTCAGAAACTCTTCTTGAATGGCAATAAGATTGAGGTTCTGCCTCAAGATGTTTTTTCCAAGTTGGTTGTTTTAGAAGAATTAAATCTCAGAGGAAATCTAATTAAGGAATTGGCACCTGGCTTGCTTCCTCCACAACTGAAGATTTTAAATCTTGAACACAACCATCTTTCCGAGCTCACATGTGGCGTCTTCTCACATCTACCTCACCTAACCCATTTACACCTGGATAGAAATAAGATTTTAACTGCCTCAGAAGATGTATTTCAAAACCTGACCAAACTAAAACATCTTAGTCTGTCAGAAAATCAGATAATATCTCTGCCAAAGACTATTTTTCATTCCCTAGAAAACCTCACTAAACTCTACCTGCATAAGAACAACTTAACTTCTTTGGATgttgaaatatttcaaaatctATATAATTTGGAAAACCTGCGACTTTCCCACAATCAGCTGAGTACAATTCCTGAAGCTCTATTAGATGCTGTAATTTTCCTGCCCTATCTGTCCTTGCATGAAAATCCTTGGATCTGCGACTGCAACTTGATGTACCTTTACAACTGGGTTCAGTATAACGTCCACAGTGTAGAGCATGCCAACAGAATATTGTGTGAGAGCCCAGAGGCCCTGAGAGGACGGGGCCTAGTCAATCTGCAGACAGCTGAGCTTTCTTGTGCACCCATGAATAATACAGCCTGCAGAGCTGAACAGATAGCCTCCCACAGCCCCTTGCAGGGTCAGGAGAACATGGCTGCAGTGACAGAGGCATCACtctctgaaactgaaacaactACAAAGCATTGCACTCTCAGTGAAGCAAATGGTATGATCACCATAACATGCAATGTACCAAAATGTCCCCAGATTAAGATTGAAGCCCAGATTCATGATGAAAATGCAAAACGAATTCATTACATCTTCAAAAAGAACTGGACTGGAATTGTAATCTTTCTTCTGCCCTTTCTATTCAACTGTGCATTTGGAGACTATGATGAACCCTATCAAGATGTCTACAAAAATGTCACAGAAATCCCCGCCACTATAAAAAGTGGTGTAACACAAGTCTATTTTTTGAACAGTAGACTTTCAACAATCAAATCTGGGGCCTTCATGAACAAACAAGCTCTACAGAAGGTGGTTTTCTTGAATAATTATGTTGGTTCAGTAGAAGCTGGTGCATTTGAAGGTTTGACTaacattacagaaattgagttttCAAACACACAACTGTCATCTCTGCCTGTGGGTGCATTTCATAATTTGAGTACCTTGAAAATACTTGGAATAACAACAAATTATCTTCAAACCATAGAGCAGGGGTTATTTGCTAATCTCTCAAACTTGGAAGACCTTAGTCTGCAAAACAACCAGATTTCTTCAATTTCGAATGAAGCATTCAATCAGCTGGAAAATCTGCTCTTTCTTCACTTGGCCAAAAATAACATCCAATCCCTATCAATTGAGTGGTTCACAAAACTGAGAAAATTAACGAAACTCAGACTCTATGAGAATCAGATCACTGTGATTCCAGATGGGATCTTCGATGATCTGTCTGAGTTGATTGACATTGGACTAAATGGCAACAAGATTAAAACATTGCCTCCAGGCTTATTTTCTAACAATAACAAGTTACACAAATTATTTCTGGATAAGAATTCACTGTCTGATCTACCGACAGGGATCTTCTTTGGTCTTCCTAATATGCAGAAGCTCACTCTGAATGATAATCAGTTAACAAGCCTGCCCCCTGCTCTTTTTGGACCAATGCCCAAATTAACTGAGATTAGTCTTGCAAACAACAACCTTACTAGCCTCCCCTGGGGGATATTCAGTAACCTCACAAACCTAAAGAAACTTCAACTGTCAGGAAACCACTTTGCCAATTTGTCAAGTAAGTATTTTGAGGGTCTTCAGAAGCTCACAGACCTGAACTTACAAAACAATTTCCTTCAGAATTTAGACAACAAGACTTTCTACGATTTGCCTAAACTGACCACTCTCAATCTAAAGGGTAATAAACTGACAACGCTTCCTGAATACATATTTGGCACATTACCAAGTCTTCGAAAAAAAATCCAGCCAAGCTCCAACTACGACCACGGTCCCTGTTCCTGCAACAACCATCCTGACTATGACAACCTGGCCTACGACAACAAAGGAAGAAACAACAACTGCTATGACCACAACATTGCCAACCACAGTGGCCACTACAACCAAGCAGGTGACCTCCACATCTACACAACTCACAACCACTGCGCCAACCACAGCATTAGACACTACTTTTCTTTATACAACTACCACAACCCATACTACAGCAATGAAGACAACCACATTTACATCCACATTTACATCCACATCTACACCTACAGCCACCTGGACAACAACTGGGTTTGTTACCTCCACTCCAGGAGCAGCAATCCATTCATATGGTGTCCAAAGCAG

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process

KEGG:

id description
ko04610 Complement and coagulation cascades

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009234 True 6182 mRNA 0.41 6 29908609 29927458

Neighbor

gene id symbol gene type direction distance location
AMCG00009232 NA coding downstream 202806 29705333 ~ 29705803 (-)
AMCG00009228 NA coding downstream 266697 29636991 ~ 29641912 (-)
AMCG00009230 NA coding downstream 320755 29573069 ~ 29587854 (-)
AMCG00009217 NA coding downstream 711466 29187536 ~ 29197143 (-)
AMCG00009216 NA coding downstream 736818 29163273 ~ 29171791 (-)
AMCG00009233 atp13a3,LOC106613657 coding upstream 2648 29930106 ~ 29955770 (-)
AMCG00009236 lsg1,LOC107573872,LOC107715771 coding upstream 64118 29991576 ~ 29998483 (-)
AMCG00009242 xxylt1,LOC106573863,LOC107718247 coding upstream 202330 30129788 ~ 30138314 (-)
AMCG00009243 xxylt1,LOC107715806,LOC106573863,LOC107718247 coding upstream 234962 30162420 ~ 30171530 (-)
AMCG00009244 NA coding upstream 253623 30181081 ~ 30185651 (-)
G55551 NA non-coding downstream 146444 29759527 ~ 29762165 (-)
G55488 NA non-coding downstream 449782 29458615 ~ 29458827 (-)
G55404 NA non-coding downstream 851368 29055713 ~ 29057241 (-)
G55359 NA non-coding downstream 1014726 28843473 ~ 28893883 (-)
G55333 NA non-coding downstream 1152976 28755298 ~ 28755633 (-)
G55610 NA non-coding upstream 48171 29975629 ~ 29976269 (-)
G55648 NA non-coding upstream 308701 30236159 ~ 30236395 (-)
G55703 NA non-coding upstream 553321 30480779 ~ 30483373 (-)
G55722 NA non-coding upstream 563780 30491238 ~ 30491980 (-)
G55760 NA non-coding upstream 725454 30652912 ~ 30655021 (-)
AMCG00009229 ccd50,LOC106613514 other downstream 203680 29660960 ~ 29704929 (-)
AMCG00009215 gpr17 other downstream 845579 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 1518513 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 2290437 27613598 ~ 27618172 (-)
AMCG00009151 NA other downstream 2572878 27314317 ~ 27335731 (-)
AMCG00009235 NA other upstream 50479 29977937 ~ 29990810 (-)
AMCG00009241 NA other upstream 322413 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 672016 30599474 ~ 30657612 (-)
G55878 NA other upstream 1007106 30934564 ~ 30937251 (-)
G55881 NA other upstream 1016909 30944367 ~ 30947211 (-)

Expression


Co-expression Network