AMCG00009241


Basic Information

Item Value
gene id AMCG00009241
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30249871 ~ 30256499 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009241
ATGGGGCTTGCATGCCTGTCAGAGCCTCAGCACACAAACCACACGCTGCGCAAAGCGTATCCCGCTGTACTGGAAGAAGCCTTTGCACAGTCGCTTAGGAGTTTGTTAGGTGAAGAACTATCCGAATACCTTGCATCGGGGGAGCAAGAAGGAAAACTTGAAAACGTGAGGTCAAGAGTGCGTCTCCTTAGAGACCTGCGTCTGGACACGAGAGCGAAGGCGGTCTGGGCCCGGATCCTGAACGACCAGCCCAGTTCACGAAGATACAAAGGCGGGGTGAAGAAAGGGGGCTCCAGAGGCTGCTTCGGCCACAAGATTGACAGAATAGGGGCTGTAAGCGGCCTTGGCTGTTAAAGACGCAGCACAGAATGGTGTGATTAATTGGACGATGGGTTTGGACAACTTTGTGTTAGTTGCTCTTCACCTGAGGAAAACAGAAAGTACCATCCTTATTCAAGAAACTGATTGGTTCGAATTTCGGTACGAAGAACCAGCGTTACTGAAGAATACAACAAcaagattataaaaaaatgcatacaaataaacacactacACAATGGCGGACAATGATGTAGAAACTAAAACTGCAAAGCTGTATATTGTCGCTGCTGTACATTCATGTACTTCATTCCtgcataaatgtatttatgtttaaaaaaactatttatatgtttataaaagagatatttataaatatgagttttatttatgtaacatttttgaaattgatgcaacTGCAGGTCAAATatgtttgtaacttttttttttgtcttaaataGCTGtaaatgttaag
>TU69579
GCCAGTAGCACTTGAGTATATTGGAGTAAGCAAAGCAAGAGAAGAAAAGCCACTTGCCAAGAAGACTGTTTAAACCACCAGGAAACTTTAGCATTCAAAGCAGAGCACAATGAATATCTCCCATTGGGTGGCTTGTGGACTATTGATGACCCTGCTGTCAGTGACCATGGAGGCAAAACCTTTAACGCAGGCACAGCAAAAGTCGCTTAGGAGTTTGTTAGGTGAAGAACTATCCGAATACCTTGCATCGGGGGAGCAAGAAGGAAAACTTGAAAACGTGAGGTCAAGAGTGCGTCTCCTTAGAGACCTGCGTCTGGACACGAGAGCGAAGGCGGTCTGGGCCCGGATCCTGAACGACCAGCCCAGTTCACGAAGATACAAAGGCGGGGTGAAGAAAGGGGGCTCCAGAGGCTGCTTCGGCCACAAGATTGACAGAATAGGGGCTGTAAGCGGCCTTGGCTGTTAAAGACGCAGCACAGAATGGTGTGATTAATTGGACGATGGGTTTGGACAACTTTGTGTTAGTTGCTCTTCACCTGAGGAAAACAGAAAGTACCATCCTTATTCAAGAAACTGATTGGTTCGAATTTCGGTACGAAGAACCAGCGTTACTGAAGAATACAACAAcaagattataaaaaaatgcatacaaataaacacactacACAATGGCGGACAATGATGTAGAAACTAAAACTGCAAAGCTGTATATTGTCGCTGCTGTACATTCATGTACTTCATTCCtgcataaatgtatttatgtttaaaaaaactatttatatgtttataaaagagatatttataaatatgagttttatttatgtaacatttttgaaattgatgcaacTGCAGGTCAAATatgtttgtaacttttttttttgtcttaaataGCTGtaaatgttaagaaaaaaaaaaatcattccaCATGCACTGCGAAgtctcttttgtgtttttttccgaGGAAACCTGGATCATCAACATCGCTTTATAACTTCACACAAACAGCCAGCATCAAATTTATGACATCCTGTTAATAATGTGATGCTTAGTTATTCCATTCATTATAAGAACTTACTTTTTGTACCGTG

Function

GO:

id name namespace
GO:0005576 extracellular region cellular_component
GO:0005179 hormone activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009241 False 793 mRNA 0.42 4 30250054 30256499
TU69579 True 1088 TUCP 0.40 3 30249871 30254483

Neighbor

gene id symbol gene type direction distance location
AMCG00009240 NA coding downstream 5375 30236908 ~ 30244496 (-)
AMCG00009244 NA coding downstream 64220 30181081 ~ 30185651 (-)
AMCG00009243 xxylt1,LOC107715806,LOC106573863,LOC107718247 coding downstream 78341 30162420 ~ 30171530 (-)
AMCG00009242 xxylt1,LOC106573863,LOC107718247 coding downstream 111557 30129788 ~ 30138314 (-)
AMCG00009236 lsg1,LOC107573872,LOC107715771 coding downstream 251388 29991576 ~ 29998483 (-)
AMCG00009255 psmd1 coding upstream 237161 30493660 ~ 30515776 (-)
AMCG00009254 psmd1 coding upstream 280351 30536850 ~ 30542295 (-)
AMCG00009253 NA coding upstream 287654 30544153 ~ 30547821 (-)
AMCG00009262 eif2b5 coding upstream 305249 30561748 ~ 30567694 (-)
AMCG00009268 NA coding upstream 395148 30651647 ~ 30652128 (-)
G55648 NA non-coding downstream 13476 30236159 ~ 30236395 (-)
G55610 NA non-coding downstream 273602 29975629 ~ 29976269 (-)
G55551 NA non-coding downstream 487706 29759527 ~ 29762165 (-)
G55488 NA non-coding downstream 791044 29458615 ~ 29458827 (-)
G55404 NA non-coding downstream 1192630 29055713 ~ 29057241 (-)
G55703 NA non-coding upstream 224280 30480779 ~ 30483373 (-)
G55722 NA non-coding upstream 234739 30491238 ~ 30491980 (-)
G55760 NA non-coding upstream 396413 30652912 ~ 30655021 (-)
G55861 NA non-coding upstream 553077 30809576 ~ 30816091 (-)
G55975 NA non-coding upstream 1658669 31915168 ~ 31915373 (-)
AMCG00009235 NA other downstream 259061 29977937 ~ 29990810 (-)
AMCG00009229 ccd50,LOC106613514 other downstream 544942 29660960 ~ 29704929 (-)
AMCG00009215 gpr17 other downstream 1186841 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 1859775 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 2631699 27613598 ~ 27618172 (-)
AMCG00009265 NA other upstream 342975 30599474 ~ 30657612 (-)
G55878 NA other upstream 678065 30934564 ~ 30937251 (-)
G55881 NA other upstream 687868 30944367 ~ 30947211 (-)
AMCG00009269 NA other upstream 716454 30972953 ~ 30985995 (-)
AMCG00009275 NA other upstream 894413 31150912 ~ 31184966 (-)

Expression


Co-expression Network