AMCG00009244


Basic Information

Item Value
gene id AMCG00009244
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30181081 ~ 30185651 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009244
ATGGGCATCCTGAAGCTCTTCTCAAACGCAATGGTTCGAGTCGGCACCTTCAGATCCTACCAGGTAGTGCTGCTGCTTGCTGCTGCGCTGGCTGTGGTGGCTTTCTACTACTTTGGATCAGAGCGGCAGAACTTTTCCAGCACAACCAAGCGCATCAAAGACAGTCAGGCCAGCCAGAATGCCAACAGGAATGATGCAGACCTGTCCTCGGCCACAAAACCGGGACAGCCTGACATTCAGTCTGTCCTGGAAGACCGTGACAAAGTGAAGAGGAAAGATGGGGTGCCAGGGATTCTTCAGTATTACCATGCACTCATGATGTTCACTAAAGTGGACAAAAACAAGGGACTGCAGGAGAAGTTTCAGGTGGCCATGAAGTCCATGGTGAAGCACGGCAGATTCATGGACGGGGAGGTTTTGACTCTGCATTTTGTCAGCGACGAGCAAAGCCGAGATCTGGGGGAGAGGATGCTGCCAGACCTGTTTCGAGATGCCACCTTTCGTTATGAGAAGCACAGTAATAAGAGTTCTGGCTGTGAACTGCTCATCCAGCCCACTAATCCACTTCTCATCAGCTCTGCCATGTGGCGGAGTGGTGCTTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009244 True 603 mRNA 0.52 2 30181081 30185651

Neighbor

gene id symbol gene type direction distance location
AMCG00009243 xxylt1,LOC107715806,LOC106573863,LOC107718247 coding downstream 9551 30162420 ~ 30171530 (-)
AMCG00009242 xxylt1,LOC106573863,LOC107718247 coding downstream 42767 30129788 ~ 30138314 (-)
AMCG00009236 lsg1,LOC107573872,LOC107715771 coding downstream 182598 29991576 ~ 29998483 (-)
AMCG00009233 atp13a3,LOC106613657 coding downstream 225311 29930106 ~ 29955770 (-)
AMCG00009234 NA coding downstream 253623 29908609 ~ 29927458 (-)
AMCG00009240 NA coding upstream 51257 30236908 ~ 30244496 (-)
AMCG00009255 psmd1 coding upstream 308009 30493660 ~ 30515776 (-)
AMCG00009254 psmd1 coding upstream 351199 30536850 ~ 30542295 (-)
AMCG00009253 NA coding upstream 358502 30544153 ~ 30547821 (-)
AMCG00009262 eif2b5 coding upstream 376097 30561748 ~ 30567694 (-)
G55610 NA non-coding downstream 204812 29975629 ~ 29976269 (-)
G55551 NA non-coding downstream 418916 29759527 ~ 29762165 (-)
G55488 NA non-coding downstream 722254 29458615 ~ 29458827 (-)
G55404 NA non-coding downstream 1123840 29055713 ~ 29057241 (-)
G55359 NA non-coding downstream 1287198 28843473 ~ 28893883 (-)
G55648 NA non-coding upstream 50508 30236159 ~ 30236395 (-)
G55703 NA non-coding upstream 295128 30480779 ~ 30483373 (-)
G55722 NA non-coding upstream 305587 30491238 ~ 30491980 (-)
G55760 NA non-coding upstream 467261 30652912 ~ 30655021 (-)
G55861 NA non-coding upstream 623925 30809576 ~ 30816091 (-)
AMCG00009235 NA other downstream 190271 29977937 ~ 29990810 (-)
AMCG00009229 ccd50,LOC106613514 other downstream 476152 29660960 ~ 29704929 (-)
AMCG00009215 gpr17 other downstream 1118051 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 1790985 28385083 ~ 28390096 (-)
AMCG00009165 rpl35a,LOC106612432 other downstream 2562909 27613598 ~ 27618172 (-)
AMCG00009241 NA other upstream 64220 30249871 ~ 30256499 (-)
AMCG00009265 NA other upstream 413823 30599474 ~ 30657612 (-)
G55878 NA other upstream 748913 30934564 ~ 30937251 (-)
G55881 NA other upstream 758716 30944367 ~ 30947211 (-)
AMCG00009269 NA other upstream 787302 30972953 ~ 30985995 (-)

Expression


Co-expression Network