Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009247 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 30446676 ~ 30483381 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | description |
|---|---|
| K12489 | ACAP; Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009247 | True | 4951 | mRNA | 0.45 | 22 | 30446676 | 30483381 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009245 | NA | coding | upstream | 25252 | 30407870 ~ 30421424 (+) |
| AMCG00009249 | NA | coding | upstream | 42436 | 30388953 ~ 30404240 (+) |
| AMCG00009248 | dis3l2 | coding | upstream | 73008 | 30363052 ~ 30373668 (+) |
| AMCG00009246 | dis3l2 | coding | upstream | 119148 | 30312794 ~ 30327528 (+) |
| AMCG00009250 | NA | coding | upstream | 148548 | 30265253 ~ 30298128 (+) |
| AMCG00009251 | NA | coding | downstream | 33845 | 30517226 ~ 30530492 (+) |
| AMCG00009252 | NA | coding | downstream | 69175 | 30552556 ~ 30558292 (+) |
| AMCG00009257 | NA | coding | downstream | 133513 | 30616894 ~ 30642141 (+) |
| AMCG00009256 | NA | coding | downstream | 158825 | 30642206 ~ 30774490 (+) |
| AMCG00009264 | NA | coding | downstream | 355512 | 30838893 ~ 30846488 (+) |
| G55649 | NA | non-coding | upstream | 203945 | 30236924 ~ 30242731 (+) |
| G55620 | NA | non-coding | upstream | 224549 | 30142212 ~ 30222127 (+) |
| G55597 | NA | non-coding | upstream | 448190 | 29998229 ~ 29998486 (+) |
| G55596 | NA | non-coding | upstream | 450806 | 29995563 ~ 29995870 (+) |
| G55595 | lsg1 | non-coding | upstream | 452035 | 29993622 ~ 29994641 (+) |
| G55707 | NA | non-coding | downstream | 12162 | 30495543 ~ 30497604 (+) |
| G55745 | NA | non-coding | downstream | 116093 | 30599474 ~ 30602032 (+) |
| G55800 | NA | non-coding | downstream | 463985 | 30947366 ~ 30950209 (+) |
| G55807 | NA | non-coding | downstream | 672137 | 31155518 ~ 31163151 (+) |
| G55926 | NA | non-coding | downstream | 1059240 | 31542621 ~ 31547232 (+) |
| G55591 | NA | other | upstream | 451238 | 29995126 ~ 29995438 (+) |
| G55573 | NA | other | upstream | 535112 | 29907911 ~ 29911564 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | upstream | 1271945 | 29171323 ~ 29174731 (+) |
| AMCG00009208 | NA | other | upstream | 1338449 | 29103608 ~ 29108227 (+) |
| AMCG00009207 | rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 | other | upstream | 1434908 | 28928892 ~ 29011768 (+) |
| G56060 | NA | other | downstream | 1678379 | 32161760 ~ 32165365 (+) |
| G56368 | NA | other | downstream | 3517415 | 34000796 ~ 34031445 (+) |
| G56369 | NA | other | downstream | 3532289 | 34015670 ~ 34018815 (+) |
| AMCG00009345 | NA | other | downstream | 3880038 | 34363419 ~ 34369257 (+) |
| G56536 | LOC100846954 | other | downstream | 4905533 | 35388914 ~ 35389327 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| grasscarp (Ctenopharyngodon idella) | CI01000015_02846943_02876819 | ACAP2 | coding | CI01000015 | null | 2846943 ~ 2876819 (+) |
