AMCG00009257


Basic Information

Item Value
gene id AMCG00009257
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30616894 ~ 30642141 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009257
ATGAATCTCACAAATATTAGCTCTGCTAAACAATCAAGTAGCAACAGTGATGATGACACCTCTGAGCAGAGAAGCAGCAGTGTACCTGATGAGCCTCAGCAACCAGAGGAGACAGTGACAGTAAACCAATGGCTAGACTCGAGCTCCACCCAGGTGGGGTCCATTACAAAGCAGAAAGTCAACACCACCAACACGCCCAGAGAGCTCAGGCTGCCCCATGACGCCCCCTCCGGGACCCTTACCTACAGACGAAGTCACTGCCACTGTGGTCGCAAGGCAGtgtaTTCAGAAAAGGCCAAGTCCATTCCCTTGACATCAGatacgcAGTTGGCGAAACTTCATAACGACCAAGTAACAAAAAAATGGGTTATATTGAAAAAACTGATGGATGCTGTTATTTATCTTGGAACACAAGAGCTCTCTTTTCGAGGGCATGATGAATCTGCATCCAGTTCTAACAAGGGAAATTTTGTAGAACTTGTTCATTTGTTGGCAGAATTTGACAGTGCTTTGGCAGAACATTTGGGCAGTGCAACAGTATTCCGAGGTATGTCAAAATCAATccaaaattacataattgacaGCATTGCTTCTGTCATACAGGATGAAATAGACACTGAGTTGAATGCTGCCCCTTTCCTGTTCAGGTCGATGACACCACTGACATTTCTTGTAAGTGTCAGTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009257 True 687 mRNA 0.45 5 30616894 30642141

Neighbor

gene id symbol gene type direction distance location
AMCG00009252 NA coding upstream 58602 30552556 ~ 30558292 (+)
AMCG00009251 NA coding upstream 86402 30517226 ~ 30530492 (+)
AMCG00009247 NA coding upstream 133513 30446676 ~ 30483381 (+)
AMCG00009245 NA coding upstream 195470 30407870 ~ 30421424 (+)
AMCG00009249 NA coding upstream 212654 30388953 ~ 30404240 (+)
AMCG00009256 NA coding downstream 65 30642206 ~ 30774490 (+)
AMCG00009264 NA coding downstream 196752 30838893 ~ 30846488 (+)
AMCG00009260 NA coding downstream 223350 30865491 ~ 30877032 (+)
AMCG00009259 LOC103373082 coding downstream 286033 30928174 ~ 30935918 (+)
AMCG00009258 NA coding downstream 302230 30944371 ~ 30947285 (+)
G55745 NA non-coding upstream 14862 30599474 ~ 30602032 (+)
G55707 NA non-coding upstream 119290 30495543 ~ 30497604 (+)
G55649 NA non-coding upstream 374163 30236924 ~ 30242731 (+)
G55620 NA non-coding upstream 394767 30142212 ~ 30222127 (+)
G55597 NA non-coding upstream 618408 29998229 ~ 29998486 (+)
G55800 NA non-coding downstream 305225 30947366 ~ 30950209 (+)
G55807 NA non-coding downstream 513377 31155518 ~ 31163151 (+)
G55926 NA non-coding downstream 900480 31542621 ~ 31547232 (+)
G55929 NA non-coding downstream 906390 31548531 ~ 31552162 (+)
G56021 NA non-coding downstream 1411646 32053787 ~ 32057482 (+)
G55591 NA other upstream 621456 29995126 ~ 29995438 (+)
G55573 NA other upstream 705330 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 1442163 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 1508667 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 1605126 28928892 ~ 29011768 (+)
G56060 NA other downstream 1519619 32161760 ~ 32165365 (+)
G56368 NA other downstream 3358655 34000796 ~ 34031445 (+)
G56369 NA other downstream 3373529 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 3721278 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 4746773 35388914 ~ 35389327 (+)

Expression


Co-expression Network