AMCG00009258


Basic Information

Item Value
gene id AMCG00009258
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30944371 ~ 30947285 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009258
GGACAATAATGTGAAAATACGCGcatataaatcataattaatcCAAAATTAATATTGGCAGATCACTGGCCGTTTAAGTCCTCAGGGCCATAGTGTTTATTCGTAGCAACGTTAAGCGTGTTCAGAGACGGTTAACCAGCCAAGAAAAAAGATGAGATGAAGTAGACGGAAATCCGTAACAAAACCAATGTCGTCCGTGGCTACGCAGGTTGGAGTGAGGTTCAACCCCCCAGCCATCGTCTTAATTTATGAGAACGAAGCGACGAAAAAGACGAGGAAGCGTGTGATGCCTGTGCGGAACTTCTCCAAGTTTTCAGACTGCAGCAAGGCGGCAGAGCGCCTGAAGAACACTGTGCGGCACAGCGCCTACCTGCAGTCTGTGTCCATGAAGCAGCTCGAGAGGCTCCATGTGATCTTGCGAGACAGACTGCTGGGCCGCAGCCTGGAGCAGAGCCTGGCCTCCCTGGACCTGGACCCCAACGAGGACCTGAACAAGCTCAGTGACGAGGAGCTGGCCCGGAAGAAGGCCAAGATGGACGAGCTCTTTGAACGGAACCGCAAAAAGAAGGATGATCCTGATTTCATGTATGACATAGAGGTGGAGTTCCCTGTGGAGGACTGTGCAGAGTCCTGCAGCTGGGATGATGACGACTCAGAGAAGCTATAGACCTTAAAGGAGGGGGCTGAAGACTCGGTGGACAGCGATCCCAACAGGTACATTGCTAATAATGTTAATTCATTGAACCAATTATTTGGTGAAATTAGATTAACTGATCAATGATACCTATAAAACCTGAAGGATTGGTGCTCCTAACTGGGACCAGGAGATGGTGATAGAAGAACAGACGTGTTGGGAGACTGCATTTACAAGTAACTGAATTTCAAATTATCATTGAAATATATTGCAAGATGTACAAGTCCATTAAGTTTAATCAATTTTGCACAAAACTGGACAATCTTGTTTGGAAcacaaaaaaactttttttccccctgcagcttcattaaaacagtattttattaccACAGGTCATGACTTTGGCTTTGCATTACTTCTACGACAACGGATCACAGACTTTGTATGGTATCCTTTTGTAAGTTTGTCTTTCGTGTTCATGTTTTGCCTAGTTATGTGTAGCTCGGAGAACTGTTTCAACGTCTGTAGTTTAGGCTTGAGAtgagctagggttttgttttggaatttgtgtattttgagcATGGTGCACTGTAtataagaaatgcatttatttgcacCATAACCTGCCTTTGTGTCTCCCAAGTCCATGCCTGAGATCCCCAATATCGGGTCCAACCCACCAAAGTTGATATATATACCACgatatattgtacatataaaattaatatattgttaaaattgttaatttgtaCCCTGTAAAAGATTGCACAATCATTGTACATTATCTTTTGTGCTCATTTGTAAGTGGCTAATATAAGCTCACTAGCATTGGCTAATGATGTTTCAGCATTAAAACCTACTTCAGAGAGGTGTTTTGAGTATTTGAGTTGTAATGTATTCTGCATCCAACAGTGAATTGAATCACTAACAAATGTTACCATGATGGCCAGATTTTCTACATTACACCCATCTCAAGTCCTGTCACTTTTGATACATGATACAGTAACCTTAGAAAGCAtacatttgtctttgatttgattCAGAaccattttacttattttgatgTAGACTTTGCATTTTGTGATAGTCTTTGCTTTTTCTGCTGATGTGGTATGTTTCAGTAATGTGTATTCAAATACCTTTATGAAAAGACTAGTAAAAAAACAGTCCGCATTATCTATTGTATCGCTATcctactcccccccccccccccccccctcaaggCTGGCATTGTTGtg

Function

GO: NA

KEGG:

id description
K16801 CEP19; centrosomal protein CEP19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009258 True 1872 mRNA 0.42 3 30944371 30947285

Neighbor

gene id symbol gene type direction distance location
AMCG00009259 LOC103373082 coding upstream 8453 30928174 ~ 30935918 (+)
AMCG00009260 NA coding upstream 67339 30865491 ~ 30877032 (+)
AMCG00009264 NA coding upstream 97883 30838893 ~ 30846488 (+)
AMCG00009256 NA coding upstream 169881 30642206 ~ 30774490 (+)
AMCG00009257 NA coding upstream 302230 30616894 ~ 30642141 (+)
AMCG00009273 NA coding downstream 183865 31131150 ~ 31136570 (+)
AMCG00009277 clstn2,LOC107561803,LOC107738117,LOC105912785,LOC107694660 coding downstream 407832 31355117 ~ 31370777 (+)
AMCG00009278 NA coding downstream 447594 31394879 ~ 31412124 (+)
AMCG00009276 NA coding downstream 472555 31419840 ~ 31424011 (+)
AMCG00009281 NA coding downstream 645763 31593048 ~ 31604365 (+)
G55745 NA non-coding upstream 342339 30599474 ~ 30602032 (+)
G55707 NA non-coding upstream 446767 30495543 ~ 30497604 (+)
G55649 NA non-coding upstream 701640 30236924 ~ 30242731 (+)
G55620 NA non-coding upstream 722244 30142212 ~ 30222127 (+)
G55597 NA non-coding upstream 945885 29998229 ~ 29998486 (+)
G55800 NA non-coding downstream 81 30947366 ~ 30950209 (+)
G55807 NA non-coding downstream 208233 31155518 ~ 31163151 (+)
G55926 NA non-coding downstream 595336 31542621 ~ 31547232 (+)
G55929 NA non-coding downstream 601246 31548531 ~ 31552162 (+)
G56021 NA non-coding downstream 1106502 32053787 ~ 32057482 (+)
G55591 NA other upstream 948933 29995126 ~ 29995438 (+)
G55573 NA other upstream 1032807 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 1769640 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 1836144 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 1932603 28928892 ~ 29011768 (+)
G56060 NA other downstream 1214475 32161760 ~ 32165365 (+)
G56368 NA other downstream 3053511 34000796 ~ 34031445 (+)
G56369 NA other downstream 3068385 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 3416134 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 4441629 35388914 ~ 35389327 (+)

Expression


Co-expression Network