AMCG00009264


Basic Information

Item Value
gene id AMCG00009264
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30838893 ~ 30846488 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009264
ATGAACAATTCAAGTTTCGACTGTATTCTTTCAATATCACCTGAGGTGAAAATGTTACACAAGGTGGTTTACATCCCCATTTTCATTCTGGGACTGCTGTTAAATGTcacagccctgtgtgtgttttgctgtaGGAGATCCAACTGGACATCTACCTTGATCTACATGACCAACTTGGCGATGGCTGACTGTATCGTTGTCCTTTCTCTCCCATTTAAGATCTATAACGTTTTTGAGGATTTGGAACTAAAAGTTTTTTGCCCATTTTTGGTGTCCATCtactttataaacatttatgCAAGCATTTTTACCATTACTGCCATAAGCATTCACCGATATATAGCAATTACTTATCCTTTTCATGCCAAAGCTACAGAATCACCCAAGAGGGCAATAGCAGTATGCATTCTAATATGGGTGACTGTAATAACAGTGAACGTCATATTTTCTAAGGAGCAGGATTGGggtggtaaaaataaatgtttcgaAAGGACAGTTGCTGAACCATATTCATATTCGTTcatcctggttttagaaataatggggtttctcctaccactatGTACAGTGGCGTTCTGTTCAACTCAAATAATCTGTACTTTGTCAAAAGACAAGATCAGCCGAACCCAAGAGTACAAAAAGAGAAGCATTCTTATCATCACAGCAAATATGGTGATCTTTTTCATCTGCTTCACTCCAATCCATGCTGGATTTTTACTCAAGTTCTTAGTTGCCAAATATGAACAGAACTGCAATCTACTTAATGCAATGCACAACTTCTTCCATGTTTCTGAATGCATCGCTTCTACTAATTGCTGTTTAGATGCCATAGGCTATTACATTATGTATTCCTACCAACACCCATGGAACATGTCAGAGGATTCCTGCTATTTCTTGACCTCCATTTACTATGTAAATATGTACGTGAGCATCCAGACAGCCACAGCTATAAGTGTAGTTCGGTATGTAGCAATAAAATATCCTTTCAAAGCACAATGGGTCATGTCCCCATGGAAAGCATTAgctgtgtgcattttaatatgggTGCTTAACTGCACATTGAGTTTTGTGAATTATAAAGCTGgcaatgaaataaagaaaaatgaatccCACGAAGTCAAGTGCTTCCAAAAGAGCAATACAAATCCACTACCACTCTCCTTTATCCTAACAATAGAGATATTGGGCTTCTTTGTGCCCCTGATACTGATCACTTTTAGTTCAGCTCAAATTATCTACACATTGCGAGAGCAGAGAAAAATAAGCTCCCCGAATGAGAAGTCGCAATGCATTCGCATCATAACAgcaaacttaattatttttgtaatctgCTTCGCCCCCATCCACGTGGGCTTTCTGATTAAGTTTTTAGTTGAGACTTACCCCCCTATCAACTGCAGCCTTCTGAATGGAGTACACACTTTTGTTCACATTGCCTCTACCATTTCCAACACAAACTGTTGCCTTGATGCTTTTTGTTATTACTTTGTGGTTCAAGATTTCTGGAAACGCACTCCTACTCCTGGTTCTGTATGCAAGAAAAATGAAGCC

Function

GO: NA

KEGG:

id description
K04276 CXCR8, GPR35; C-X-C chemokine receptor type 8

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009264 True 1551 mRNA 0.39 2 30838893 30846488

Neighbor

gene id symbol gene type direction distance location
AMCG00009256 NA coding upstream 64403 30642206 ~ 30774490 (+)
AMCG00009257 NA coding upstream 196752 30616894 ~ 30642141 (+)
AMCG00009252 NA coding upstream 280601 30552556 ~ 30558292 (+)
AMCG00009251 NA coding upstream 308401 30517226 ~ 30530492 (+)
AMCG00009247 NA coding upstream 355512 30446676 ~ 30483381 (+)
AMCG00009260 NA coding downstream 19003 30865491 ~ 30877032 (+)
AMCG00009259 LOC103373082 coding downstream 81686 30928174 ~ 30935918 (+)
AMCG00009258 NA coding downstream 97883 30944371 ~ 30947285 (+)
AMCG00009273 NA coding downstream 284662 31131150 ~ 31136570 (+)
AMCG00009277 clstn2,LOC107561803,LOC107738117,LOC105912785,LOC107694660 coding downstream 508629 31355117 ~ 31370777 (+)
G55745 NA non-coding upstream 236861 30599474 ~ 30602032 (+)
G55707 NA non-coding upstream 341289 30495543 ~ 30497604 (+)
G55649 NA non-coding upstream 596162 30236924 ~ 30242731 (+)
G55620 NA non-coding upstream 616766 30142212 ~ 30222127 (+)
G55597 NA non-coding upstream 840407 29998229 ~ 29998486 (+)
G55800 NA non-coding downstream 100878 30947366 ~ 30950209 (+)
G55807 NA non-coding downstream 309030 31155518 ~ 31163151 (+)
G55926 NA non-coding downstream 696133 31542621 ~ 31547232 (+)
G55929 NA non-coding downstream 702043 31548531 ~ 31552162 (+)
G56021 NA non-coding downstream 1207299 32053787 ~ 32057482 (+)
G55591 NA other upstream 843455 29995126 ~ 29995438 (+)
G55573 NA other upstream 927329 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 1664162 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 1730666 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 1827125 28928892 ~ 29011768 (+)
G56060 NA other downstream 1315272 32161760 ~ 32165365 (+)
G56368 NA other downstream 3154308 34000796 ~ 34031445 (+)
G56369 NA other downstream 3169182 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 3516931 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 4542426 35388914 ~ 35389327 (+)

Expression


Co-expression Network