AMCG00009265


Basic Information

Item Value
gene id AMCG00009265
gene name NA
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 30599474 ~ 30657612 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009265
CTTGACTCTGTGAACAATCTGACAGCCAGTAACATCAGCACAACATCCATAGCCCTTAGCTGGAGTGCACCATCTGAAAATGCAGGGAGGTATAGAGTTGAAGCCATTGGACCTACTGTTACAAACTTCACAGTGAACACATTATCAACTGAAATAACTGGACTTGTACCTGGAAGCAATTATACACTGTGGGTTATTGCTGTGGCTGCAGACAATGTTACTGAAGGAGCTCCAGTGACCATAACTGTGTTCACAAAGCCCAAGAAGATTGCCCATCTGACGGCCAGCAATGTCAGCACAACATCCATAGCCCTTAGCTGGAGTGCACCATCTGGAAATGTGTGGGGGTACAGGGTTAAAGCTACAGGACCTACTGTTACATACGTAACAGTGAACACATTATCAACTGAAATTACTGGACTTGTACCTGGAAGCAGTTATACACTGCGCATTATTGCTGTGGCTGCAGACAATGTTACTGAAGGAGCTCCAGTGCCAATAACAGTGTTTACGAACCCTGAAGTGGTTACCAATCTGAGTACCAGCAACATTAGCACAACATCAATAGGCCTTAGCTGGATTGCACCATCTGGAAATGCAGGGGGGTACAGAGTTGAAGCCAATGGAGTGACTGTTAAGAGTCTTGGAATGAACACGTTGTCAACTGAAATATCTGGACTTGTATCCGGGAGCAATTATACTCTAGGGGTCATTGCTGTGGCAGCAGATAATGTTTCTCAAGGAACTCCAGTGACAATAGTTGTGTTCACTAAGCCTGATGTTGTCAACAGTTTAACTGTGATTAACGTCACCACAACATCCATAGCCCTTAGCTGGAGTGCACCATCTGGAAATGCAGGGGGGTACAGCGTTGAAGCCAATGGAGTGACTGTTAAGAGTCTTGGAATGAACACGTTGTCAACTGAAATAACTGGACTTGTACCCGGGAGCAATTATACTTTAGGGGTTATTGCTGTAGCTGCAGACAATGTTACTCAAGGAgctgcagtgacagtgacagttcTTTTA
>TU69693
GTTCAGTCTTACAGCAGGAATTATGTCTTTCAGATGCCAAACaataatcatgtatttaattttattcttaagcctctgtttgtgttttggacAAGGAATATCAATAACAGcaacaacaactgcaGATCCCAGTACCACAACTGCAGATCCTACTACCACAACTGCAGATCCCACTACCACAACTTCAGATCCTACAACCGCAAATGATGATCctactaccaccacaactgaatcTCCCTCTACCACAAACACAGTTTACCCTACtaacacaactgcagctccgACTACcactacaactgcagctccaactaCTACAGCAACACCAGCTACTACTAACACTCCTACTACTACAATGGTCACAAAGCTTGACTCTGTGAACAATCTGACAGCCAGTAACATCAGCACAACATCCATAGCCCTTAGCTGGAGTGCACCATCTGAAAATGCAGGGAGGTATAGAGTTGAAGCCATTGGACCTACTGTTACAAACTTCACAGTGAACACATTATCAACTGAAATAACTGGACTTGTACCTGGAAGCAATTATACACTGTGGGTTATTGCTGTGGCTGCAGACAATGTTACTGAAGGAGCTCCAGTGACCATAACTGTGTTCACAAGTGAGTTGCTT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009265 True 1029 mRNA 0.45 4 30599474 30602845
TU69693 False 631 TUCP 0.43 3 30602579 30657612

Neighbor

gene id symbol gene type direction distance location
AMCG00009262 eif2b5 coding downstream 31780 30561748 ~ 30567694 (-)
AMCG00009253 NA coding downstream 51653 30544153 ~ 30547821 (-)
AMCG00009254 psmd1 coding downstream 57179 30536850 ~ 30542295 (-)
AMCG00009255 psmd1 coding downstream 83698 30493660 ~ 30515776 (-)
AMCG00009240 NA coding downstream 354978 30236908 ~ 30244496 (-)
AMCG00009266 NA coding upstream 36087 30693699 ~ 30696595 (-)
AMCG00009267 NA coding upstream 144133 30801745 ~ 30803630 (-)
AMCG00009261 itm2c,LOC102237697,LOC105920507,LOC104919396 coding upstream 238363 30895975 ~ 30905764 (-)
AMCG00009263 cab39 coding upstream 249256 30906868 ~ 30917622 (-)
AMCG00009270 NA coding upstream 289686 30947298 ~ 30970858 (-)
G55722 NA non-coding downstream 107494 30491238 ~ 30491980 (-)
G55703 NA non-coding downstream 116101 30480779 ~ 30483373 (-)
G55648 NA non-coding downstream 363079 30236159 ~ 30236395 (-)
G55610 NA non-coding downstream 623205 29975629 ~ 29976269 (-)
G55551 NA non-coding downstream 837309 29759527 ~ 29762165 (-)
G55861 NA non-coding upstream 151964 30809576 ~ 30816091 (-)
G55975 NA non-coding upstream 1257556 31915168 ~ 31915373 (-)
G55991 NA non-coding upstream 1292810 31950422 ~ 31950673 (-)
G56012 NA non-coding upstream 1340465 31998077 ~ 32031970 (-)
G56163 NA non-coding upstream 2142923 32800535 ~ 32800895 (-)
AMCG00009241 NA other downstream 342975 30249871 ~ 30256499 (-)
AMCG00009235 NA other downstream 608664 29977937 ~ 29990810 (-)
AMCG00009229 ccd50,LOC106613514 other downstream 894545 29660960 ~ 29704929 (-)
AMCG00009215 gpr17 other downstream 1536444 29057941 ~ 29063030 (-)
AMCG00009186 LOC101485254,LOC105936810,LOC108230674,LOC100697045,LOC107392689 other downstream 2209378 28385083 ~ 28390096 (-)
G55878 NA other upstream 276952 30934564 ~ 30937251 (-)
G55881 NA other upstream 286755 30944367 ~ 30947211 (-)
AMCG00009269 NA other upstream 315341 30972953 ~ 30985995 (-)
AMCG00009275 NA other upstream 493300 31150912 ~ 31184966 (-)
AMCG00009332 NA other upstream 3349991 34007603 ~ 34026160 (-)

Expression


Co-expression Network