AMCG00009284


Basic Information

Item Value
gene id AMCG00009284
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 31954671 ~ 31959897 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009284
ATGGTAAAGATCGAGTTTGCTCCTCTGCATATCCCCTTCAGCAGGAGGCTGGAGACAGCAGCTGTTCTGCAATGGgtcttctccttcctcttcctggGCCAGTGCTGTATGGCCTTGTTTATTCTCATTGTACTGAGTGGCTACTGGCATGCTGCTGCTCTGTATGTGGTGTGGTTGTACTTGGACTGGGACACACCGCAGTGTGGAGGTAGAAGGTCCTCATGGGTTAGATGCTGGAGAGTTTGGAAACATTTCCGAAACTACTTCCCCATTAAGCTTATAAAGACCTGTGACCTGGACCCCGAGAAAAACTACCTGTTCGGTTTTCATCCCCATGGCATTCTGGCAGCGGGAGCCTTTGGGAATTTCTGCACCGAGGCCACTGGTTTCCGGGAGCTCTTCCCCGGTTTGACCCCTTATCTCCATATACTTCCTTTTTGGTTCCGATTTCCTGTCTTTAGAGAGTACATCATGTCTGCAGGGGTAGTTTCCTGCTCCAAGAAAAGCGTAACACATGTGCTGAGCCAAGGAGGAGGAAACATCTCTGTCATTGTGATTGGGGGTGCTGCGGAGGCCTTagatgccaggcctggaagccTTATATTAGAAGCTCTTAACAGGAAGGGATTTATCAAGATTGCTCTCAAATGTGGggCACATTTGGTCCCAGTGTTTTCCTTTGGAGAAAATGAGCTCTTTACCCAGCTGGAAAATCCTGAGGGATCATTAGTGAGGTCCATCCAGAACAGACTTCGAAAGATAATGGGATTCAGTATGCCACTGTTTCATGCCCGGGGTGTGTTTCAGTACAGCTTTGGTCTCATTCCCTACAGGAAACCCATCTATACTGTAGTGGGAAGACCCATCGCTGTGGAGCAAAATGTGAACCCTTCAGCTGAGGAGGTGGATAGACTGCACAGCGAGTACTTGGAGGCACTGAACCAGTTGTTTGAGCAGCACAAGGCCCAGTATGGCATACCAGAGCATGATCACCTAGTCTTT

Function

GO: NA

KEGG:

id description
K14458 MOGAT1, MGAT1; 2-acylglycerol O-acyltransferase 1

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009284 True 1002 mRNA 0.49 6 31954671 31959897

Neighbor

gene id symbol gene type direction distance location
AMCG00009283 NA coding upstream 13980 31920687 ~ 31940691 (+)
AMCG00009281 NA coding upstream 350306 31593048 ~ 31604365 (+)
AMCG00009276 NA coding upstream 530660 31419840 ~ 31424011 (+)
AMCG00009278 NA coding upstream 542547 31394879 ~ 31412124 (+)
AMCG00009277 clstn2,LOC107561803,LOC107738117,LOC105912785,LOC107694660 coding upstream 583894 31355117 ~ 31370777 (+)
AMCG00009288 acsl3b,LOC107567703,LOC106568845,LOC107745612 coding downstream 8922 31968819 ~ 31999086 (+)
AMCG00009292 NA coding downstream 48667 32008564 ~ 32009088 (+)
AMCG00009291 NA coding downstream 90607 32050504 ~ 32052393 (+)
AMCG00009289 NA coding downstream 100916 32060813 ~ 32066699 (+)
AMCG00009293 NA coding downstream 155581 32115478 ~ 32119196 (+)
G55929 NA non-coding upstream 402509 31548531 ~ 31552162 (+)
G55926 NA non-coding upstream 407439 31542621 ~ 31547232 (+)
G55807 NA non-coding upstream 791520 31155518 ~ 31163151 (+)
G55800 NA non-coding upstream 1004462 30947366 ~ 30950209 (+)
G55745 NA non-coding upstream 1352639 30599474 ~ 30602032 (+)
G56021 NA non-coding downstream 93890 32053787 ~ 32057482 (+)
G56062 NA non-coding downstream 206968 32166865 ~ 32168048 (+)
G56064 cul3,LOC100710156,LOC107384027 non-coding downstream 214410 32174307 ~ 32179259 (+)
G56120 NA non-coding downstream 588110 32548007 ~ 32553904 (+)
G56211 ppm1l,LOC108430727,LOC105935930 non-coding downstream 988240 32948137 ~ 32950966 (+)
G55591 NA other upstream 1959233 29995126 ~ 29995438 (+)
G55573 NA other upstream 2043107 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 2779940 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 2846444 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 2942903 28928892 ~ 29011768 (+)
G56060 NA other downstream 201863 32161760 ~ 32165365 (+)
G56368 NA other downstream 2040899 34000796 ~ 34031445 (+)
G56369 NA other downstream 2055773 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 2403522 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 3429017 35388914 ~ 35389327 (+)

Expression


Co-expression Network