AMCG00009292


Basic Information

Item Value
gene id AMCG00009292
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 32008564 ~ 32009088 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009292
ATGCTAATCATGGAAGCAGAAAACACCACCGCAGCCGACCTGGCGGGGCTCAGCGCCTCCTCCAAGAGCGTCGACGCCCGGGAAGGTGGCAACGAGTACCTGTACATCCTAATCGTCATGTCCTTCTACGGGATCTTCCTGCTGGGGATTATGCTTGGCTACGTCCGATCAAAGAGGAGGGAGAAGAAATCCAACGCCTTGACGCACCTGCTCTACGAGGAGGAGCGGCGGGAGTGGGGGGACATGCGGAAGAAGCACAGCCTGCCGCTGCCCTCCTGTTCAGGACTGGGAGCTGTCCAGGTGTCGCTGCCCTTCAGCGGCCTGGCGGACGGGCGGCTGCCGGCGCCCTTCTCCTGCGCCATGTGCACCATGGAGCAAAGCAGCGTCAGCTCCCTGTGCTCGTCCGCAGACATCCACTGCGCCatcgaggaggaggaggcggacgCCGGGGAGCCCTGCGAGGCGCTCAAAGCCAAGTCGGACAACAGAGAGCAGTGCGTGGCCATGCTCCATGAAGCATCTTGA

Function

GO: NA

KEGG:

id description
K04898 KCNE4; potassium voltage-gated channel Isk-related subfamily E member 4

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009292 True 525 mRNA 0.63 1 32008564 32009088

Neighbor

gene id symbol gene type direction distance location
AMCG00009288 acsl3b,LOC107567703,LOC106568845,LOC107745612 coding upstream 9478 31968819 ~ 31999086 (+)
AMCG00009284 NA coding upstream 48667 31954671 ~ 31959897 (+)
AMCG00009283 NA coding upstream 67873 31920687 ~ 31940691 (+)
AMCG00009281 NA coding upstream 404199 31593048 ~ 31604365 (+)
AMCG00009276 NA coding upstream 584553 31419840 ~ 31424011 (+)
AMCG00009291 NA coding downstream 41416 32050504 ~ 32052393 (+)
AMCG00009289 NA coding downstream 51725 32060813 ~ 32066699 (+)
AMCG00009293 NA coding downstream 106390 32115478 ~ 32119196 (+)
AMCG00009298 NA coding downstream 174037 32183125 ~ 32196353 (+)
AMCG00009304 NA coding downstream 512430 32521518 ~ 32533407 (+)
G55929 NA non-coding upstream 456402 31548531 ~ 31552162 (+)
G55926 NA non-coding upstream 461332 31542621 ~ 31547232 (+)
G55807 NA non-coding upstream 845413 31155518 ~ 31163151 (+)
G55800 NA non-coding upstream 1058355 30947366 ~ 30950209 (+)
G55745 NA non-coding upstream 1406532 30599474 ~ 30602032 (+)
G56021 NA non-coding downstream 44699 32053787 ~ 32057482 (+)
G56062 NA non-coding downstream 157777 32166865 ~ 32168048 (+)
G56064 cul3,LOC100710156,LOC107384027 non-coding downstream 165219 32174307 ~ 32179259 (+)
G56120 NA non-coding downstream 538919 32548007 ~ 32553904 (+)
G56211 ppm1l,LOC108430727,LOC105935930 non-coding downstream 939049 32948137 ~ 32950966 (+)
G55591 NA other upstream 2013126 29995126 ~ 29995438 (+)
G55573 NA other upstream 2097000 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 2833833 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 2900337 29103608 ~ 29108227 (+)
AMCG00009207 rab6ba,rab6b,LOC107552273,LOC107696768,LOC103151367,LOC106527458,LOC107088682,LOC102207753,LOC107752652 other upstream 2996796 28928892 ~ 29011768 (+)
G56060 NA other downstream 152672 32161760 ~ 32165365 (+)
G56368 NA other downstream 1991708 34000796 ~ 34031445 (+)
G56369 NA other downstream 2006582 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 2354331 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 3379826 35388914 ~ 35389327 (+)

Expression


Co-expression Network