AMCG00009312


Basic Information

Item Value
gene id AMCG00009312
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 32847550 ~ 32847873 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009312
ATGGGCTATTTCATCCAGCGCATCATCTGCCCCAGACCTCGGAGGCACCACGAAAGGCAGGACGACCCCTCGCTTTTGAATGGGCACACGACTGCCTCTCAGGACTCCCTCATAGACCGCCTGCCCGAGCACAGGATCGGGGCTTTCACGTCCCCTGTCCTGCAACTGCCGGCGTATGACGAGGTGAAGTATCTCCCGACGTACGAGGAAACCATGCAAGTGGACAGAGACCGCTCCGATGACAATCTGCTCTCTGCAGCTGGACAAACTGAAGAGACAGCCCACACGGCCAGTGATACCAGGACTTCATGGAACTCGGTTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009312 True 324 mRNA 0.57 1 32847550 32847873

Neighbor

gene id symbol gene type direction distance location
AMCG00009309 LOC106612913,LOC106580942,LOC103369651,LOC102193686 coding upstream 47109 32783131 ~ 32800441 (+)
AMCG00009311 NA coding upstream 87421 32759533 ~ 32760129 (+)
AMCG00009308 NA coding upstream 95085 32572939 ~ 32752465 (+)
AMCG00009306 NA coding upstream 282613 32553662 ~ 32564937 (+)
AMCG00009305 gfm1 coding upstream 299055 32533877 ~ 32548495 (+)
AMCG00009313 LOC107702994 coding downstream 60061 32907934 ~ 32923438 (+)
AMCG00009318 nmd3 coding downstream 158102 33005975 ~ 33016571 (+)
AMCG00009317 NA coding downstream 202131 33050004 ~ 33055488 (+)
AMCG00009319 NA coding downstream 408596 33256469 ~ 33257811 (+)
AMCG00009320 NA coding downstream 589813 33437686 ~ 33451270 (+)
G56120 NA non-coding upstream 293646 32548007 ~ 32553904 (+)
G56064 cul3,LOC100710156,LOC107384027 non-coding upstream 668291 32174307 ~ 32179259 (+)
G56062 NA non-coding upstream 679502 32166865 ~ 32168048 (+)
G56021 NA non-coding upstream 790068 32053787 ~ 32057482 (+)
G55929 NA non-coding upstream 1295388 31548531 ~ 31552162 (+)
G56211 ppm1l,LOC108430727,LOC105935930 non-coding downstream 100264 32948137 ~ 32950966 (+)
G56261 NA non-coding downstream 258497 33106370 ~ 33106621 (+)
G56262 NA non-coding downstream 261866 33109739 ~ 33110019 (+)
G56268 NA non-coding downstream 433664 33281537 ~ 33281764 (+)
G56282 NA non-coding downstream 609018 33456891 ~ 33457172 (+)
G56060 NA other upstream 682185 32161760 ~ 32165365 (+)
G55591 NA other upstream 2852112 29995126 ~ 29995438 (+)
G55573 NA other upstream 2935986 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 3672819 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 3739323 29103608 ~ 29108227 (+)
G56368 NA other downstream 1152923 34000796 ~ 34031445 (+)
G56369 NA other downstream 1167797 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 1515546 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 2541041 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 4446030 37293903 ~ 37297009 (+)

Expression


Co-expression Network