AMCG00009326


Basic Information

Item Value
gene id AMCG00009326
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33902135 ~ 33935311 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009326
CCGCACTGCACGCGCTGATGTGGTGACGGCAGCGGAGACTAAACGCTTCCATTGCGCACATTATTACACACGCATTCACAGTTTGCGGGTCTAAATATTGAAAGGGCAGGATTTTTGGTTTCCGAGAAAAGGCTCCTTACAGAACAAGAATGAATCTGAATGATTTTGTTGTGACAAACAAGCCTAGTTCAGTAAAGCTTAAAACCAGGAATCTGCGAGAGATGAAGCTGGAGACGGCGCACTTGGAGTTTGAAAGTAAGGACATGGAGAGCAGACTTCAGCAACTGAGGCAGAGCATgagcagagagaaggaggaaaGAGAaaaaTCAGGAGGGTATCACTGGAAATCTAGTCAGCCTGGCACATCGACTACTAACCCCCAGGGAGTGGGACAAAACAAGGAGAACAGTTTTCAAAAGTTATCAGCTGGGAAAATGAAGATTAAAGTTCTCAGAGATCAACCAGAAGAATTGAACAAATCGCCAGAAAAACGACCGACGCCAACGGGTTCTCTGCTCAGTAGGAAAACCAAACTGAAGGGAAAGGATTGTGGACAGTGTGAATCAAAGAAGGCAGGGGTGATGTGTAAGGAATGTGGAGAAGACTACTGCCTTGGTTGTTTTGCCAGATTTCACCAGAAGGGGGCACTGAAGCACCACCGAATGATACCCATTCAAATGGAGATCCAGACTTCCATCAGCACATTAGATGTTGTTAGTCAGTTTAAGAAACAAATTGATCCTGAAGGATCAACTGTGAAAACCCGACAGGAGGATGCTGTTCTGGGCAAGCAGTCACCTGTAAGATATCCTTCACCTGAAATTAAAAGGAATGCTGAGATTTTAGTCCTGGGTCATGGAGAGCAGGTGCAAAACCCTACGCCAAGGGACGGAGATCAGTCTTTACTTAAGGGTGTATTTGACGAAGAAGAATCTGCACAATCTTTTCAGGAAGTATTAATGAAATGGAGAGATTGTAAAGGAGACGATAACCAAGAATGGAGCCCCTCAGAAGCTGTACCAGATGAGGAGATGGAGGTACACAGGTACTGCACTTCTCTTTTTACAGCAAGTGAGATTAATCAGCATAATCACCGAACTGAATCATGCTTAAGTGTTGTGGAGTTAGATGAGGCCCTGCACAATCTTGCTGAAAGAAAAGTGAGAGACCAGTATCATGGCCTGAATGGGTTTCTTACTTTAGGCGTTGAAACTAAAAAGCTTGGCCCCAATCCTTTTCAACCAACTACATCATTTGAAAATGAGGGAGACGAAGAACTTCTGAGTGAAGAAACAATAGGAATGGTGGACTGGAGGCCGTGCAGCAGTCTCAGTGAAAATGCGGACGAGGTCGTTGTCAGCAGTGTAATTGGCAGCGCCAGGAGCAGACCTTCCAGCAGCCGTTGCCATCCCATCAACAGTGGTAGAGCTGGCTCCTCTTTAAAGCAACCACCACCACCCGTGGAAGATAAAGAGTCATCACCTGGGAAGAAATTATCTAAATCTTCAAGGCCAAGTACTGCAGAGGCACGGCCGCTATCCAGAGCCGCACTCGAAATTTTGCAGATCGAAACCATAGACTCCATGGAGAAGGATGATCCACGCCAAGATGATGAGGCTGACGATAGCGCGTTGGCAAATCTGGAGGaggaatttaaaatgcttcgaAGAGATGAAGATGTTGATAAAACCAACACGCAAGATTCAAATGCCTTTCGGACTCAAGAATGGATAACAATCCAGACTGCAAAAAGCTGGGATACTGAAGGTCACACAGATGATGAGGAGGAGATTCTAAGAGACAAACAGAATGTTATGTCACTACCCTGACCACAGAAAATGAATTAGGTACCAGTTGTAGAATTTTGTCAGTAACATGGTTCTCAGCaggactgaaattaaaaatactataatttATTGTTGCATAAAGCTATGATTGACCTGGAAATTAAAGTATGTACAATATAGTTTTGAATATAAAGCATATCCTTTGAAAACTGAATAATATACATCATCtcataaaatagttttaatactggagaaattaatacaataaacatacatattcattcacacacacacccccaccccaggGCAAAGGTTTTATCCCAGGTTCTGCCAAGGTTTCCCATACCTCAAGGTTACTATTATTACAGAAGCTAACAAATGTTGCATACCCGAGTGagattttcttaaaaataattgtatccaTGATAGTGGTGATTACATTTGTGTGATTCCATGTTaatgtaaaactattttaatctGTCATTTCATTGTCTTGCTCCATAGCACTTACCATATAGTTATTGATTGTTAaagcatatttaattacattgatcaTCACTCTTGTGGAGAAAACAGTGAAATACCT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009326 True 2373 mRNA 0.42 15 33902135 33935311

Neighbor

gene id symbol gene type direction distance location
AMCG00009322 ppm1l,LOC106580962,LOC101065476 coding downstream 897845 33001428 ~ 33004290 (-)
AMCG00009321 ppm1l,LOC107722109,LOC107681725,LOC107560765 coding downstream 943898 32950616 ~ 32958237 (-)
AMCG00009314 kpna4,LOC107750083 coding downstream 962160 32928268 ~ 32939975 (-)
AMCG00009316 ift80 coding downstream 998575 32895249 ~ 32903560 (-)
AMCG00009315 NA coding downstream 1028861 32852198 ~ 32873274 (-)
AMCG00009328 NA coding upstream 8938 33944249 ~ 33948166 (-)
AMCG00009325 NA coding upstream 15836 33951147 ~ 33969816 (-)
AMCG00009327 NA coding upstream 35530 33970841 ~ 33976806 (-)
AMCG00009331 NA coding upstream 136525 34071836 ~ 34076094 (-)
AMCG00009339 NA coding upstream 204795 34140106 ~ 34169068 (-)
G56265 NA non-coding downstream 758013 33143856 ~ 33144122 (-)
G56260 NA non-coding downstream 805285 33096584 ~ 33096850 (-)
G56259 NA non-coding downstream 805905 33095997 ~ 33096230 (-)
G56256 sptssb non-coding downstream 863896 33032977 ~ 33038239 (-)
G56185 NA non-coding downstream 1057799 32844095 ~ 32844336 (-)
G56401 NA non-coding upstream 188295 34123606 ~ 34124979 (-)
G56513 NA non-coding upstream 1225280 35160591 ~ 35160877 (-)
G56515 LOC103376870 non-coding upstream 1237565 35172876 ~ 35173249 (-)
G56522 NA non-coding upstream 1413133 35348444 ~ 35348927 (-)
G56532 NA non-coding upstream 1423029 35358340 ~ 35358650 (-)
AMCG00009275 NA other downstream 2717169 31150912 ~ 31184966 (-)
AMCG00009269 NA other downstream 2916140 30972953 ~ 30985995 (-)
G55881 NA other downstream 2954924 30944367 ~ 30947211 (-)
G55878 NA other downstream 2964884 30934564 ~ 30937251 (-)
AMCG00009265 NA other downstream 3244523 30599474 ~ 30657612 (-)
AMCG00009332 NA other upstream 72292 34007603 ~ 34026160 (-)
AMCG00009333 NA other upstream 106765 34042076 ~ 34050737 (-)
AMCG00009342 kcnab1 other upstream 291963 34227274 ~ 34274084 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other upstream 304173 34239484 ~ 34316008 (-)
AMCG00009347 gmps other upstream 398950 34334261 ~ 34362341 (-)

Expression


Co-expression Network