AMCG00009329


Basic Information

Item Value
gene id AMCG00009329
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 33991608 ~ 34001073 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009329
CTTCTGAAATCTCTAGAGCCATGATTTTCCTTGGAATATTGCCTCTGCTTTTGTTGCACATCCTGTGTGGACAAGCAGATCTCCAAGATGAAATAATTGCAGACTTCTCTGTGAAGCTCTATCACCAGCTAAAGGCAGTgggaaatgaagaaaacatcaTCTATTCCCCACTAAGCATTGCAGTTGCTTTAGGAATGGTGGAGCTAGGGGCCCGTGGTTCAACTTTGAAAGAAATAAGACAAGTAATGGGATATGGCAACTTGAAAGTGGGAGAGGAGTTCACAATGCTAAAGAACCTCACACAGGCCCTGGCCGAAGAAGATAATCAGTACGTAGTTAAACTGGCTAATGCCCTTTTCCTACAAACTGGGATCCACTTTAACGAAGACTTTCTGCAGATgatgaaaaagtattttcacGCAGAACTGGAAACGGTGGACTTCAGTCAGTCGGCCGCTATTGCCGATCATATTAACAAGTGGGTGGAAAATCACACGGAGATGAAAATTCATGACCTACTCTCGGCGGATGATTTCAGCAGTGCTACTCGGCTGACCCTTATTAACGCCATCTATTTCCGAGGAAACTGGAAAAACCAGTTTCGGCCCGAGCACACTCGCACTTTCTCTTTCACGAAAGACGACGGCAATGAGGTGCAGACTCTAATGATGTACCAGCAGGGGGATTTCTACTACGGTGAATTCAGTGATGGCACTACAGAGGCGGGCGGGGTGTACCAGGTGTTGGAAATGCCATATGAAGGAGAGGAGATGAGCATGATGCTAGTTCTGCCTCGTCAAGAAGTGCCTTTGGCTGCACTGGAGCCAATTATTAAAGCTCAGCTGATAGAGGAATGGGCCAGCAGTGTTAAGAAGCAAAAGGTAGAAGTCTACTTGCCAAGATTTAAAGTAGAACAGAAGATTGACTTAAAGGAAACCTTGGAAGGTCTGGGCATTAAGAATATTTTTACTAAAGATGCTGATCTTTCAGCTATGACTGATGGGAAAGGTCTATTCATTAGGAAAGCCGTTCAGAAGGCATTCCTGGAGGTCACAGAGGAGGGAGCCGAAGGTGCCGCAGCTTCAGGCGAGTTCCCCTCTTTTATCGTCTCCCTGCTACGAATCTGGATGATTGCTCTCACAAGGACATTAGTGTTGTATCCACAAGTGATGGCAGATCACCCGTTTTTCTTCATTATCAGAGCCAGAAAGACAGgaacaATCCTTTTCATGGGGAGAGTGATGAACCCAGAGGTTATTGATACCAATGACCGTGACTTTGATGCACTCGATGCGCTGCAGCCTCGAGGGAAGACTGCAGGCCACCTGCGTGTGGAGCCACGTCACTTAGCAACGGGGCCGCTGCCCTGGCCAGCttctgttccccccccccccaagagcCACGGCGTCTCGCCTTTCAGCAGCCTGCCGTCGCACATGGGACTCGGCACACGGCTGGACCTC

Function

GO:

id name namespace
GO:0005615 extracellular space cellular_component

KEGG:

id description
K23412 SERPINI1; neuroserpin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009329 True 1463 mRNA 0.48 9 33991608 34001073

Neighbor

gene id symbol gene type direction distance location
AMCG00009324 NA coding upstream 414009 33534374 ~ 33577599 (+)
AMCG00009323 slitrk3,LOC107570382,LOC107705787,LOC107600237 coding upstream 470623 33515937 ~ 33520985 (+)
AMCG00009320 NA coding upstream 540338 33437686 ~ 33451270 (+)
AMCG00009319 NA coding upstream 733797 33256469 ~ 33257811 (+)
AMCG00009317 NA coding upstream 936120 33050004 ~ 33055488 (+)
AMCG00009330 NA coding downstream 450 34001523 ~ 34005647 (+)
AMCG00009334 veph1,LOC106581439 coding downstream 62491 34063564 ~ 34068571 (+)
AMCG00009337 NA coding downstream 79421 34080494 ~ 34090966 (+)
AMCG00009338 LOC107692013,LOC106581445 coding downstream 91653 34092726 ~ 34108014 (+)
AMCG00009336 NA coding downstream 118013 34119086 ~ 34121611 (+)
G56282 NA non-coding upstream 534436 33456891 ~ 33457172 (+)
G56268 NA non-coding upstream 709844 33281537 ~ 33281764 (+)
G56262 NA non-coding upstream 881589 33109739 ~ 33110019 (+)
G56261 NA non-coding upstream 884987 33106370 ~ 33106621 (+)
G56211 ppm1l,LOC108430727,LOC105935930 non-coding upstream 1040642 32948137 ~ 32950966 (+)
G56376 NA non-coding downstream 37061 34038134 ~ 34042259 (+)
G56379 NA non-coding downstream 44417 34045490 ~ 34078839 (+)
G56474 NA non-coding downstream 581874 34582947 ~ 34662345 (+)
G56495 NA non-coding downstream 961681 34962754 ~ 34963224 (+)
G56501 NA non-coding downstream 1019161 35020234 ~ 35067229 (+)
G56060 NA other upstream 1826243 32161760 ~ 32165365 (+)
G55591 NA other upstream 3996170 29995126 ~ 29995438 (+)
G55573 NA other upstream 4080044 29907911 ~ 29911564 (+)
AMCG00009220 lsm2,LSM2,smx5 other upstream 4816877 29171323 ~ 29174731 (+)
AMCG00009208 NA other upstream 4883381 29103608 ~ 29108227 (+)
G56369 NA other downstream 14597 34015670 ~ 34018815 (+)
AMCG00009345 NA other downstream 362346 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 1387841 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 3292830 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 3347035 37348108 ~ 37367671 (+)

Expression


Co-expression Network