Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00009330 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030126.1 |
| NCBI id | CM030126.1 |
| chromosome length | 46242406 |
| location | 34001523 ~ 34005647 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00009330 | True | 519 | mRNA | 0.48 | 5 | 34001523 | 34005647 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00009329 | NA | coding | upstream | 450 | 33991608 ~ 34001073 (+) |
| AMCG00009324 | NA | coding | upstream | 423924 | 33534374 ~ 33577599 (+) |
| AMCG00009323 | slitrk3,LOC107570382,LOC107705787,LOC107600237 | coding | upstream | 480538 | 33515937 ~ 33520985 (+) |
| AMCG00009320 | NA | coding | upstream | 550253 | 33437686 ~ 33451270 (+) |
| AMCG00009319 | NA | coding | upstream | 743712 | 33256469 ~ 33257811 (+) |
| AMCG00009334 | veph1,LOC106581439 | coding | downstream | 57917 | 34063564 ~ 34068571 (+) |
| AMCG00009337 | NA | coding | downstream | 74847 | 34080494 ~ 34090966 (+) |
| AMCG00009338 | LOC107692013,LOC106581445 | coding | downstream | 87079 | 34092726 ~ 34108014 (+) |
| AMCG00009336 | NA | coding | downstream | 113439 | 34119086 ~ 34121611 (+) |
| AMCG00009335 | ccnl1 | coding | downstream | 119382 | 34125029 ~ 34133695 (+) |
| G56282 | NA | non-coding | upstream | 544351 | 33456891 ~ 33457172 (+) |
| G56268 | NA | non-coding | upstream | 719759 | 33281537 ~ 33281764 (+) |
| G56262 | NA | non-coding | upstream | 891504 | 33109739 ~ 33110019 (+) |
| G56261 | NA | non-coding | upstream | 894902 | 33106370 ~ 33106621 (+) |
| G56211 | ppm1l,LOC108430727,LOC105935930 | non-coding | upstream | 1050557 | 32948137 ~ 32950966 (+) |
| G56376 | NA | non-coding | downstream | 32487 | 34038134 ~ 34042259 (+) |
| G56379 | NA | non-coding | downstream | 39843 | 34045490 ~ 34078839 (+) |
| G56474 | NA | non-coding | downstream | 577300 | 34582947 ~ 34662345 (+) |
| G56495 | NA | non-coding | downstream | 957107 | 34962754 ~ 34963224 (+) |
| G56501 | NA | non-coding | downstream | 1014587 | 35020234 ~ 35067229 (+) |
| G56060 | NA | other | upstream | 1836158 | 32161760 ~ 32165365 (+) |
| G55591 | NA | other | upstream | 4006085 | 29995126 ~ 29995438 (+) |
| G55573 | NA | other | upstream | 4089959 | 29907911 ~ 29911564 (+) |
| AMCG00009220 | lsm2,LSM2,smx5 | other | upstream | 4826792 | 29171323 ~ 29174731 (+) |
| AMCG00009208 | NA | other | upstream | 4893296 | 29103608 ~ 29108227 (+) |
| G56369 | NA | other | downstream | 10023 | 34015670 ~ 34018815 (+) |
| AMCG00009345 | NA | other | downstream | 357772 | 34363419 ~ 34369257 (+) |
| G56536 | LOC100846954 | other | downstream | 1383267 | 35388914 ~ 35389327 (+) |
| AMCG00009404 | NA | other | downstream | 3288256 | 37293903 ~ 37297009 (+) |
| AMCG00009405 | pfn2,LOC105899220,LOC106598797,LOC105028925 | other | downstream | 3342461 | 37348108 ~ 37367671 (+) |
