AMCG00009343


Basic Information

Item Value
gene id AMCG00009343
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34220572 ~ 34254089 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009343
ATGCATTTTTATACGAACTGTAAGAGTGTAGAACGAGAAAGCAGGGTATTCTATTCACTTTCCCAGCCCAAACCCAGTGTCCCAGTGAGCACTGGCCAGCTGTGGGCCGGGCTGTTTGAGTCCACAGGCCTCACCTGCAGAGGCAGCGTAGTGCAGGGCCGTGTTCCCCTTGTCGTCGGTGGCGTTGACATCGGCCCGCTCGATCATCTGCAGGCAGTTGGCCCGGCGCTGATCATCCTGCTCAAGCGGCACGGTCTGGGGCTTGGAGCACAGCAGGTGGAGGGCAGTCTGGTTGTacagagagaaacacacagacacacagaggaaaCACAGGAGGGAGACAACGAGACATTCGGAGGCAGACTGGGAGGGCGGGGTGGGGCTGACCTCAGCAGGTCGTTCCTCTACAACAAAGGTGGGAACCCCAACAAGCGCAATGCGCACAACCAGACCGCCCTCCACCTGCTGTGCTCCGGGCCCCAGACCATGCCGCCTGAGCAGGACGATCAGCGCCGGGCCAACTGCCTGCAGATGATCCTGAAGTGGAGGGGCGAGAGGCTGGATGGTGGCGCGTACGAGCGGGCCGATGATTCTCTTACCCACTGCCAGCTGAGGCTAGGGGAGACCAAGTCATCGCCCCCACACCTGCACCCACACAGTGAACACAGCCTGGTCAGCACCCGTCAggaagtacagtacagtggacagCGGAAACTGAAAGAGGACTTTccagaaaacacattattgaagGAAATATTGTGTGCAGTGCAAAACACATAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009343 True 780 mRNA 0.58 8 34220572 34254089

Neighbor

gene id symbol gene type direction distance location
AMCG00009335 ccnl1 coding upstream 86877 34125029 ~ 34133695 (+)
AMCG00009336 NA coding upstream 98961 34119086 ~ 34121611 (+)
AMCG00009338 LOC107692013,LOC106581445 coding upstream 112558 34092726 ~ 34108014 (+)
AMCG00009337 NA coding upstream 129606 34080494 ~ 34090966 (+)
AMCG00009334 veph1,LOC106581439 coding upstream 152001 34063564 ~ 34068571 (+)
AMCG00009346 NA coding downstream 101650 34355739 ~ 34362436 (+)
AMCG00009349 NA coding downstream 145026 34399115 ~ 34430416 (+)
AMCG00009355 NA coding downstream 248559 34502648 ~ 34503259 (+)
AMCG00009357 NA coding downstream 383439 34637528 ~ 34677384 (+)
AMCG00009360 NA coding downstream 435669 34689758 ~ 34690484 (+)
G56379 NA non-coding upstream 141733 34045490 ~ 34078839 (+)
G56376 NA non-coding upstream 178313 34038134 ~ 34042259 (+)
G56282 NA non-coding upstream 763400 33456891 ~ 33457172 (+)
G56268 NA non-coding upstream 938808 33281537 ~ 33281764 (+)
G56262 NA non-coding upstream 1110553 33109739 ~ 33110019 (+)
G56474 NA non-coding downstream 328858 34582947 ~ 34662345 (+)
G56495 NA non-coding downstream 708665 34962754 ~ 34963224 (+)
G56501 NA non-coding downstream 766145 35020234 ~ 35067229 (+)
G56541 LOC103376870 non-coding downstream 1284798 35538887 ~ 35539807 (+)
G56542 NA non-coding downstream 1320957 35575046 ~ 35576926 (+)
G56368 NA other upstream 189127 34000796 ~ 34031445 (+)
G56369 NA other upstream 201757 34015670 ~ 34018815 (+)
G56060 NA other upstream 2055207 32161760 ~ 32165365 (+)
G55591 NA other upstream 4225134 29995126 ~ 29995438 (+)
G55573 NA other upstream 4309008 29907911 ~ 29911564 (+)
AMCG00009345 NA other downstream 109330 34363419 ~ 34369257 (+)
G56536 LOC100846954 other downstream 1134825 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 3039814 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 3094019 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 3167928 37422017 ~ 37463505 (+)

Expression


Co-expression Network