AMCG00009352


Basic Information

Item Value
gene id AMCG00009352
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 34513261 ~ 34530442 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009352
ATGGAAGtcattctgtgtttttctttattactgGGATCAGACTATTTAGCTTATTCTTCTGATTTGCCAATTTGTAAACTGCAAGGAAACTTTGAGTTGAATGGGTTGTATAAAAAAGGTGACATTGTTTTGGGGGGATTATTTCCATTGCATTTTGCAACAGTATATCCTGAACTGACCTTCACTTCAAAACCAGAGCAGTTGAGATGTGAGAGCTTTCAATTGCGATCTTTCCAGTATGCACAGGCAATGGCTTTTACTATAGAGGAAATAAACAGAGACCCTGCCCTTCTTCCTAACATCACTCTGGGCTACAGGCTGTATGACAACTGTGTCAACCTGGCAGGAGCGTTTCGAGCAGCCATAGCCCTGATCAGCGGAGTGGGCGACATTTTCACTGACTACAGCTGTACAGGGACACCCCCAGTCTTAGGCATTGTTGGGGATCCTGATTCAACTAATTCCATTTCAATATCTAGAGTGCTGGGTCTTTTCAATGTTCCATTGGTActTGACATGTCAGGGTTGAGGGGTGCCTACACtgtttataaagcagtgtaCACCTTGGCACATTCCCTACATAATCTGATGTCCTGTGAATTTGGAAAAGGGCCATTTGAAAATAACTCCTGTGCTGACATCACAAGTGTGCAGCCCTGGCAGGTGAGGACATATTCTTTGGATAAGATAAAAGCAGCCACAGCCCTGATCAGCGGAGTGGGCGACATTTTCACTGACTACAGCTGTACAGGGACACCCCCAGTCTTAGGCATTGTTGGGGATCCTGGGTCAACTAATTCCATTTCCATATCCAGAATGCTGGATCTTCTCCACGTTCCTTTGTGGGCACAGACAATGGTATTTGCTATAGATGAAATAAACAGAGAGCCTGCCCTTCTTCCTAACATCACTCTGGGCTACAGGTTGTATGACAACTGTATCAACCTGGCAGGAGCGTTTCGAGCAGCCACAGCCCTGATCAGCGGAGTGGGCGACACTTTCACTGACTACAGCTGTACAGGGACACCCCCAGTCTTAGGCATTGTTGGGGATCCTGGGTTACAGTAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009352 True 1068 mRNA 0.46 6 34513261 34530442

Neighbor

gene id symbol gene type direction distance location
AMCG00009354 NA coding downstream 5315 34507303 ~ 34507946 (-)
AMCG00009353 NA coding downstream 19445 34493131 ~ 34493816 (-)
AMCG00009350 NA coding downstream 64623 34442613 ~ 34448638 (-)
AMCG00009348 LOC103353156,LOC108264139,LOC105897118,LOC102202609,LOC102296764,LOC106520617,LOC101166072 coding downstream 180252 34310829 ~ 34333009 (-)
AMCG00009344 kcnab1a,LOC107711771,LOC107566585,LOC107675612,LOC107671078 coding downstream 235166 34276267 ~ 34278095 (-)
AMCG00009351 NA coding upstream 36577 34567019 ~ 34582515 (-)
AMCG00009356 NA coding upstream 57051 34587493 ~ 34607443 (-)
AMCG00009358 NA coding upstream 94584 34625026 ~ 34633822 (-)
AMCG00009362 NA coding upstream 169422 34699864 ~ 34700521 (-)
AMCG00009366 NA coding upstream 214676 34745118 ~ 34745790 (-)
G56401 NA non-coding downstream 388282 34123606 ~ 34124979 (-)
G56265 NA non-coding downstream 1369139 33143856 ~ 33144122 (-)
G56260 NA non-coding downstream 1416411 33096584 ~ 33096850 (-)
G56259 NA non-coding downstream 1417031 33095997 ~ 33096230 (-)
G56256 sptssb non-coding downstream 1475022 33032977 ~ 33038239 (-)
G56513 NA non-coding upstream 630149 35160591 ~ 35160877 (-)
G56515 LOC103376870 non-coding upstream 642434 35172876 ~ 35173249 (-)
G56522 NA non-coding upstream 818002 35348444 ~ 35348927 (-)
G56532 NA non-coding upstream 827898 35358340 ~ 35358650 (-)
G56535 LOC108434093,LOC108264124,LOC103148094 non-coding upstream 845644 35376086 ~ 35376369 (-)
AMCG00009347 gmps other downstream 150920 34334261 ~ 34362341 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other downstream 197253 34239484 ~ 34316008 (-)
AMCG00009342 kcnab1 other downstream 239177 34227274 ~ 34274084 (-)
AMCG00009333 NA other downstream 462524 34042076 ~ 34050737 (-)
AMCG00009332 NA other downstream 487101 34007603 ~ 34026160 (-)
G56546 LOC103376870 other upstream 1008445 35538887 ~ 35539810 (-)
G56568 NA other upstream 1341681 35872123 ~ 35872597 (-)
G56800 NA other upstream 2685518 37215960 ~ 37220076 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other upstream 2750106 37280548 ~ 37285365 (-)
AMCG00009408 NA other upstream 2755134 37285576 ~ 37394988 (-)

Expression


Co-expression Network