AMCG00009371



Basic Information


Item Value
gene id AMCG00009371
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 35062938 ~ 35066332 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>AMCG00009371
ATGAGTTCTAGGATGTTATTGCGAGCAGCAGCACTGGTGATGGTTATGGCTGTTTTGACATCAGCAGAACTGCCTGTTTGCAGGCTGCAGGGAAGAGCGTCTCTTCCACATTTATCTCATGAGGGAGACATTTTGATCGGTGGAGTATTCGCATTTCACAGCAACATAGAGACCAAAATATATCCCTTTACAACCATACCAGACCCTCTGGAATGCAAAAGTTCAGGCAGTGATAGGAGGATCCGTATCATCAAATGCAATTACCATCTCAACTGCAGTTGGATCTTTTCACATTCCTGTGCATTTCTGGCCAGAGGAGAGATGACTGTTCTGTTAACAGAGTTATTCCTTCACAATGTTACTGGTCTGCAGTGGATTGGCAGTGAAGCTTGGATAACTGCCAGAAACTATGCAACAGCAGAAGGTTATAAAGTCCTAACTGGATCTATGGGATTCGCtatcattaataaaaacatagatGGATTAAGAGAGTTTTTCATGCATCTCCAGCCATCTCAAGTGCAGGGAAATGCTCTCATGGATAAGTATTGGGAGACAGCACTGAATTGTTCTCTGTCAAATCAAGATAACACAACAGGTATAAAACCCTGCACGGGATCTGAGAGATTAACGGAGTTGAAAAACAGATACGCAGACATATCTGAGATGAGAATATACAACAATGTTTACAAATCAGTCTATGCTGTTGCATATTCTCTGCACAATCTGATTACATGCAAAAAAGGGCAAGGTCCTTTTGAAAACCATAGTTGTGCAGAAACAATTTCAATTGAACCATGGCAGgtGCTTGAGTATGTGAAAACTGCCAACTTCACAACCAAAACTGGGGAAGAAATCACATTTGACCAGAGTGGAGACCCAGTGGCCAAATATGAATTAGTGAACTGGCAACCGGTTAATGAAAGCAGCATACAGTTTACCACTGTCGGTTACTATGATGCTTCATTGCCAGCAGGTCATCAGTTTGTCATGAATGATGTCAACATTGTCTGGGTTGGCAGTCAGCATGAG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
AMCG00009371 True 1032 mRNA 0.42 4 35062938 35066332
Loading

Neighbor


gene id symbol gene type direction distance location
AMCG00009370 NA coding upstream 122311 34936048 ~ 34940627 (+)
AMCG00009369 NA coding upstream 176992 34867644 ~ 34885946 (+)
AMCG00009368 NA coding upstream 197298 34844468 ~ 34865640 (+)
AMCG00009367 NA coding upstream 277961 34784678 ~ 34784977 (+)
AMCG00009359 NA coding upstream 320979 34741233 ~ 34741959 (+)
AMCG00009372 NA coding downstream 19142 35085474 ~ 35092886 (+)
AMCG00009375 NA coding downstream 779638 35845970 ~ 35846681 (+)
AMCG00009377 NA coding downstream 1138478 36204810 ~ 36205884 (+)
AMCG00009376 NA coding downstream 1139553 36205885 ~ 36206498 (+)
AMCG00009378 NA coding downstream 1343726 36410058 ~ 36417003 (+)
G56495 NA non-coding upstream 99714 34962754 ~ 34963224 (+)
G56474 NA non-coding upstream 400593 34582947 ~ 34662345 (+)
G56379 NA non-coding upstream 984099 34045490 ~ 34078839 (+)
G56376 NA non-coding upstream 1020679 34038134 ~ 34042259 (+)
G56282 NA non-coding upstream 1605766 33456891 ~ 33457172 (+)
G56541 LOC103376870 non-coding downstream 472555 35538887 ~ 35539807 (+)
G56542 NA non-coding downstream 508714 35575046 ~ 35576926 (+)
G56567 NA non-coding downstream 804496 35870828 ~ 35871040 (+)
G56582 NA non-coding downstream 859606 35925938 ~ 35926195 (+)
G56584 NA non-coding downstream 861040 35927372 ~ 36034695 (+)
AMCG00009345 NA other upstream 693681 34363419 ~ 34369257 (+)
G56368 NA other upstream 1031493 34000796 ~ 34031445 (+)
G56369 NA other upstream 1044123 34015670 ~ 34018815 (+)
G56060 NA other upstream 2897573 32161760 ~ 32165365 (+)
G55591 NA other upstream 5067500 29995126 ~ 29995438 (+)
G56536 LOC100846954 other downstream 322582 35388914 ~ 35389327 (+)
AMCG00009404 NA other downstream 2227571 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 2281776 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 2355685 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 2464490 37530822 ~ 37605124 (+)

Expression


AMCG00009371 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 3.
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AMCG00009371 Expression in each Bioproject

Bar chart with 4 bars.
AMCG00009371 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 2.5.
End of interactive chart.

Co-expression Network