AMCG00009373


Basic Information

Item Value
gene id AMCG00009373
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 35423478 ~ 35805085 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009373
ATGCCCGCTGGCTCCACGCTGTACTGTTCCAGCATGTATGGTCACGGGCCGAGAACCCAGCAGCTGGATGGTCCCTATTGGCCCTCTAGGGGTCTGCACggcctctttttctttcttgagGTATTACATTACCTGAAAGAAGTTAACTTCACAACCTGGAATGGAGAAAAGGTGTATTTCGATGAAAATGGGGATCCAGCAGCACGATATGCGTTAGTGAACTGGCAGCTTAAAAATAATGGAATTACAACAATTGAAGATATTGGTCTATATGATGCCTCCTTACCAGATGGACAgagatttgtaatgaatgaagtcagtgcagtgtgggctGGTGATCGGGATGAGGTATTACATTACTTGAAGGATGTTAACTTCACAACCTGGAATGGAGAAAAGGTGTATTTCGATGAAAATGGAGATCCAGCAGCACGATATGCATTAGTGAACTGGCAGCTTAAAAATAATGGAATTACAACAATTGAAGATATTGGTCTATATGATGCCTCCTTACCAGATGGACAgagatttgtaatgaatgaagTCAGTGCAGTTTGGGCTGGTGATCAGGACAAGCAATATAAATCCCTCCCCAGACTCCGTCTCTTTCCCTGCCTGAGCCATACCGCCCACAGTATTAGCAGACACCACCAGGTCCTCGACTGGAGTGGCCACCTGGCGGTGTATGCGTCGGCCCCTCTGTTAACTGAGGCTCCTGTGGCTTTGCGGTATCGCTGCTCCCAACCCCTCCGCTCTGTCCACTGGAGCCTGCCTCCCCCTCGTCTCCCTGTGCTGCATTACTTGTCCAGAGTTAACTTCACATGCAGGAATGGAGAAAGGGTctattttgatgaaaatggaGATCCAGCAGCACGCTATGCCCTAGTGAACTGGCAGCTTAACAAGGAGGGAATCACAGCATTTGAAATCATTGGTCTGTATGATGCTTCTTTACCAGACGAACAGCCATTTGTAATGAATGATGTCAGTCCTGTATGGGCAGGTGATCAGCAAAAGGCAGCTATAATTAAAGTGAAGGCACACCAGGACACTGGCAATCAGGCTGCAATAGCCGCTGCCCCACTGCTACTACCGTCCTCTGTCTCCGCTGCAGTCCCCATAAACCCTTCTCTCGCAGATGTCTGTCAGTCACAGACAGATTGCGAACAGGAGGAATCGGGGAACGGGTCAAAGGCCGAGCTATCTACGAAAGACAGCTCTGGGTTGACCCGTCACAAACCTGTGTTACAACACATGCGTATACACTGGTGGTGGACTGGTATGGGCCGCGAGGTTGAGAAGTTCACTTCCTTCAGaGCAACACCTGAGTCTTCTCCTCCCATTCTACCAGTGATGCTTGATTCAACTTGCGTCTACTACCTGCGCAGATATCAACAGCGCAACCGGGTTTGGCGGCACAACCCTGCACATGAACAGATGCCAGTAGAAAGCCATCAGTATGAAGACCCAGACTTTGGGAACGAGTTGTGCAACTTGACCAACATCTCAAATCTTCCTAAATTGAAGGCAACCCTTAAGGCCACTGCACCAGAGGATGAGATTACCAAGCGATTGAATATCGGAATACTAATTGTGACCGAAGATGGTGGACAAAACCTGCTCCCTAAAGAAATCCTTGATGTTGCAGTCATCCTGGATTAA

Function

GO:

id name namespace
GO:0007165 signal transduction biological_process
GO:0016020 membrane cellular_component
GO:0004871 obsolete signal transducer activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009373 True 1662 mRNA 0.48 13 35423478 35805085

Neighbor

gene id symbol gene type direction distance location
AMCG00009363 NA coding downstream 567011 34844519 ~ 34856467 (-)
AMCG00009365 NA coding downstream 590311 34832534 ~ 34833167 (-)
AMCG00009364 NA coding downstream 655412 34765834 ~ 34768066 (-)
AMCG00009366 NA coding downstream 677688 34745118 ~ 34745790 (-)
AMCG00009362 NA coding downstream 722957 34699864 ~ 34700521 (-)
AMCG00009374 NA coding upstream 102127 35907212 ~ 35908512 (-)
AMCG00009383 NA coding upstream 731081 36536166 ~ 36550686 (-)
AMCG00009385 NA coding upstream 771122 36576207 ~ 36576473 (-)
AMCG00009384 NA coding upstream 815321 36620406 ~ 36623497 (-)
AMCG00009382 NA coding upstream 835149 36640234 ~ 36663731 (-)
G56535 LOC108434093,LOC108264124,LOC103148094 non-coding downstream 47109 35376086 ~ 35376369 (-)
G56532 NA non-coding downstream 64828 35358340 ~ 35358650 (-)
G56522 NA non-coding downstream 74551 35348444 ~ 35348927 (-)
G56515 LOC103376870 non-coding downstream 250229 35172876 ~ 35173249 (-)
G56513 NA non-coding downstream 262601 35160591 ~ 35160877 (-)
G56570 NA non-coding upstream 84365 35889450 ~ 35889682 (-)
G56611 NA non-coding upstream 275550 36080635 ~ 36105419 (-)
G56612 NA non-coding upstream 291723 36096808 ~ 36393518 (-)
G56710 p2ry1 non-coding upstream 1064463 36869548 ~ 36871823 (-)
G56742 NA non-coding upstream 1362909 37167994 ~ 37168244 (-)
AMCG00009347 gmps other downstream 1061137 34334261 ~ 34362341 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other downstream 1107470 34239484 ~ 34316008 (-)
AMCG00009342 kcnab1 other downstream 1149394 34227274 ~ 34274084 (-)
AMCG00009333 NA other downstream 1372741 34042076 ~ 34050737 (-)
AMCG00009332 NA other downstream 1397318 34007603 ~ 34026160 (-)
G56568 NA other upstream 67038 35872123 ~ 35872597 (-)
G56800 NA other upstream 1410875 37215960 ~ 37220076 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other upstream 1475463 37280548 ~ 37285365 (-)
AMCG00009408 NA other upstream 1480491 37285576 ~ 37394988 (-)
AMCG00009417 NA other upstream 1662169 37467254 ~ 37476035 (-)

Expression


Co-expression Network