AMCG00009381


Basic Information

Item Value
gene id AMCG00009381
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36576217 ~ 36611929 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009381
ATGGGTATAGAGAAAACTCCCAGCGTTCTGGCAACAACCATAGATCCAGAAGAACTGGCATCCCCAATAATGATTGGGACCTCTGGAGCTTGCCCACACCCCAAGCCAGACACGGTGTCCCTCTCTCCTGTCACAAGCGCCATGGCCGCCCCCAGGGTACTCAGCTGTGTCAGGCAGGTGTCGGCGATGTCCAAGGAGGCAGTGGACCCAGGTGTGGGAGGCTGTGCTCATATCTCAACTGTCTCCCTCAATGCTGCTCTTCCAGCTGGGCTGCCAACAAGCACCTTCACCTGCCAGCACTGTGAGTGGGGGGTGGCCAAAGTGTGtggcagctgcagcagcaggcgCAGGGGTCTCAGGGAGAGGCCGAGaaaccAGTCTAGTTCTAGAATGAACCTTTATGCCTGGctctatttttctttcatatttcatCGGAATGTATTTAGAGCGCAGCAATCCACATGCAAGCTACATGGAAAGTCAGGCTTAAAAAGACTTTACAGAAATGGAGACTTAACTATTGGAGGATTATTCCCTGTCCATACTAGAGTAGTTCTACCtgacaaatcatttaaatataaaccacAATTGTCAAAATGTGAAGGGTTTGATATCAGGGGGTATCGCTGGGTGCAGGCAATGATTTTTGCCGTGGaagaaatcaataacaacaCAGAACTTCTCCCCAACATCACACTGGGTTACACCATCGCTGACACCTGCCTGACACAGCTGAGTACCCTGGGGGCGGCCATGGCGCTTGTGACAGGAGAGAGGGACACCGTGTCTGGCTTGGGGTGTGGGCGAGCTCCAGAGGTCCCTGTCATTATTGGGGATGCCAGTTCTTCTGGATCTATGGTTGTTGCCAGAACGCTGGGAGTCTACTCTATACCCATGGCAGAAATTAAAGGTCTGAGGTCATTCCTGTGCAGAATTCACCCTGAATCAGACCCAGCTGATCCGTTCATCACTGAATTTTGGGAAGCAGTGTTTGGTTGCTCTCTAGATCAGAGTGTGAGTTCTTCCCCAACATCACTATCATCCAAGCCAAAGTGTACAGGAGCAGAAAACTTGGAAAGCGTGGAAAGCACATATAATGATGTCTCACAATTAAGAACTACCTACAATGTGTACAAAGCTGTTTACACAATAGCACATGCTGTTCATGACATGCTTTCCTGTAGCCCTGGAGAAGGTCCTTTTGAGAATGGATCATGCCCAGACATCACTCACCTCCAGCCATGGCAGGAAGGTCATGTTGTTCTGGGAGGGATGTTTCCAATTCACTCCAAAGGCATCAATGAGTTGCAGGCTTACAGGGAGAAGCCAGGAAAGAAACAATGTAGGGGGGTGTTTCGATGGTCCCAAGCAATGATTTTCTTCATagaggaaataaacagaaacaaaactctTTTACCCAATGTCACACTTGGATACGCTTTGTATGACAACTGTGGAATTGAAGTCCAGTCAATGAAAACAGCATTATCAATGATAACTCTTCCACTGAAAAATGGGGAAAAGGTGTGCCATGAAAATCCATCTATACCAATAATAATAGGGGACTCTGGATCTTCTCTTTCAATGGCGATATCCAGACTACTGAATCTGTTCAAAGTTCCTTTGCTTAGAGTGACCTACAACGTGCACAAAGCTGTGTACGCTGTAGCCCATGCTTTACACAATTTACAAGCCTGTGAGAATGAGGATACATGTGAGCTCAGAGAAGACTTTGATATGATCTCACATCATAAGGAAGGCCATGTTGTTCTGGGAGGGATGTTTCCAATTCACTCCCAAGGCATCCATGAGAAGCAGCCGTATGGGGAGAAGCCAGGACAGAAGCAATgtGTGCACAAATGA

Function

GO:

id name namespace
GO:0016020 membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009381 True 1863 mRNA 0.47 12 36576217 36611929

Neighbor

gene id symbol gene type direction distance location
AMCG00009379 NA coding upstream 30500 36528946 ~ 36545717 (+)
AMCG00009380 NA coding upstream 60491 36515194 ~ 36515726 (+)
AMCG00009378 NA coding upstream 159214 36410058 ~ 36417003 (+)
AMCG00009376 NA coding upstream 369719 36205885 ~ 36206498 (+)
AMCG00009377 NA coding upstream 370333 36204810 ~ 36205884 (+)
AMCG00009386 NA coding downstream 78904 36690833 ~ 36698116 (+)
AMCG00009387 NA coding downstream 92360 36704289 ~ 36731243 (+)
AMCG00009392 NA coding downstream 297167 36909096 ~ 37086094 (+)
AMCG00009393 NA coding downstream 474588 37086517 ~ 37087593 (+)
AMCG00009396 NA coding downstream 521300 37133229 ~ 37145082 (+)
G56623 NA non-coding upstream 96842 36476438 ~ 36479375 (+)
G56584 NA non-coding upstream 541522 35927372 ~ 36034695 (+)
G56582 NA non-coding upstream 650022 35925938 ~ 35926195 (+)
G56567 NA non-coding upstream 705177 35870828 ~ 35871040 (+)
G56542 NA non-coding upstream 999291 35575046 ~ 35576926 (+)
G56629 NA non-coding downstream 15266 36627195 ~ 36631814 (+)
G56698 NA non-coding downstream 263149 36875078 ~ 36875398 (+)
G56694 NA non-coding downstream 288364 36900293 ~ 36975061 (+)
G56712 NA non-coding downstream 417277 37029206 ~ 37029542 (+)
G56747 NA non-coding downstream 576639 37188568 ~ 37188778 (+)
G56536 LOC100846954 other upstream 1186890 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2206960 34363419 ~ 34369257 (+)
G56368 NA other upstream 2544772 34000796 ~ 34031445 (+)
G56369 NA other upstream 2557402 34015670 ~ 34018815 (+)
G56060 NA other upstream 4410852 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 681974 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 736179 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 810088 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 918893 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 996376 37608305 ~ 37616696 (+)

Expression


Co-expression Network