AMCG00009382


Basic Information

Item Value
gene id AMCG00009382
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36640234 ~ 36663731 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009382
GGTGACAAGACTTTGTCCTCGGGTTcagccttttcttttctataaCACTTCCCAGCTACATCTACAAAGGGAATCTGGCAGTTCAATTCCAGTTTCAAGGTGCacgttttaagttttaaaagatCAAGGATTGGTGTATTGTTTCAGGcaaagacagaaagacagatggAACCAGTAGATAATAACGCGCCAAAATcaaaaaaaaagctacaatGGACATCCTTGGAGATTGGACTGACAACCATAGTGTCTCTTCTCATGATTGTGGTGATTGCTCTGATAAGCTTAATTGCAACACAAGGTGGTGATGATACTTGCAAAACTGCAGATTGTGCAAAATCAGCTGCACGCATAATTGAAAATATGGACATCAGTGCAAATCCTTGCCAGAACTTTTACCAATACGCCTGTGGAGGATGGTTAAAGAAGAACATTATTCCTGAAACCAGTTCTCGGTATAGCACATTTGACATTCTGAGAGATGAACTCGAAGTTGTGCTAAAAGAGGTTCTCGAAAAGCCTGACACAATGGAAATTTCTGCGCTGACCAAAGCAAAGTCACTGTATCAATCCTGCACAAATGAAAcggCCATTGAAAGCAGAGGCGGTGCTCCATTGATTAATGTGCTGCCTGACATTAAAGACTGGCCAGTAGCAGCTGACAACTGGGAGGACAGATTTGGGTTAACCTGGACAGCTGAAGACGCGATCGCAAAGCTGAATCAGAATTACGGAAAGCAAGTCCTCGTAAACTTTTTTGTCGGAACGGACGACAAAGACTCCAATGTCCACATTATTCACTTTGATCAGCCTGGACTAGGCCTCTCATCCCGTGATTACTATTCTTGTCAAGGTTTATATAAAGAGACCTGTGATGCATATCGGCAGTTCATGATAGATGTGGCCAAGCTGATCCGAGCAGAGAGAGGCCTGACAGTCAATGAGACTGACATCACGGCCCAGTTATTGAAAGTCATGGATCTGGAGAAAGCAATTGCTAATGCAACAGATAGACCAGAAGACAGAAACGATCCTGTTCTCCTCTATAACAAAATGGAGTTAGGTGTTATGAAAGACAATTTTTCCTTAGAGATTAAAGCAAAAaaATTTAACTGGACTCGTTTTACCAACAATATCATGGGATCTGTTAATATTACCATAACAGAACAGGAGCCTGTTGTTGTTTATGCCCCCAATTATCTTAGGAAACTGAATCCCATCCTCTTAGAGTACACACCAAGGGacattcaaaattatattgtgTGGCGCTTCATTATGGATATGGTCAGCAGCTTGAGTAGAAACTACAAGGATTCAAGGAAAGCTTTCCGTAAGGCCCTTTATGGGACAACATCTGAGACGGCAGTTTGGCGCCAGTGTGCAAACTACGTCAACAGCAACATGGAGAATGCAGTGGGAAGGTTATACATCGAAGAGGCCTTTGCAGGAGAAAGTAAAGAGATGGTTGATGAAATGATTGTCCAGATGCGGGAAGTGTTCATACAGACTCTAGATGACCTGTCATGGATGGATAAGGAAACGAGAGGAAAAGCAGAAGACAAAGCAAGAGCCATTAAAGAACGAATTGGGTACTCAGATAATATCAACGACAATGCCTATCTGGACAAGGAGTACAAAGATTTGAATTACGATGTGGAGAAATACTTTGAGAACTTCCTTCAGAACCTGAAGTTTGGGCAGATGAGGCGACTGAAGAAACTCAGAGAGAAAGTAAACAAAGAGGAGTGGATCACTGGAGCGGCCATTGTCAATGCCTTCTATTCTTCAAGCAGAAACCAAATagttttccctGCTGGAATCCTTCAGCCCCCTTTCTTTGGCAAAGGTCAATCCAAATCTCTGAATTATGGTGGGATAGGCATGGTCATTGGCCACGAAATCACTCATGGCTTCGATGACAATGGACGAAACTTTGACAAAAATGGAGATCTCACAGACTGGTGGACAAAAGAGTCAGCTGACAAATTTAATCAACTCTCCCAGTGTATGGTCTATCAGTATGGAAACTTCTCCTGGGATCTAGcaggtggtcaaaatATCAGTGGTGTTACTACTCTGGGAGAGAATATTGCAGACAATGGTGGAATCAGACAAGCATATCAAGCttacaaaaattacattaacacaCACGGAGAAGAGGAACGTCTCCCAGGAATTGACATGAACCACAAGCAGTTATTCTTTCTCAATTTTGCACAGGTGTGGTGTGGGACTTACAGGCCTGAGCATGCTGTCAATTCCATCAAAACAGATGTCCATAGTCCTGGACAATTCAGagtgttagggtcaTTACAGAATTTCCCAGAATTTGCTGAAGCATTTTCCTGCAGCATGGATGATTACATGGCCCCCAAGAAGCAGTGTCGGGTTTGGTAAAAAGAAACGGCACCGCAAAccaagagggagagaaagagccGTCACTATTGAAAGACTGTTAGACAATAATTGCAGGTATTCAACTGCACATATACAGGGTAGAATTATTGAATTCAGTGCATTCACACagattaatttttatttttttggtcgGAGTTTATGTGCTAAATGGTGAATTGTTCAAAAActagttgtttttcttttcttttttttatgttacggtaacactgaaaaataatttagcattttctatataaatatttttaaacatttttgcataaaagataaaaacaaagacactcatataagttaatattttttatcaGAATGACTTCTGTTATGAAAGTGatatctatttaaaacaataccagAAAAGACAGCAAATGTGGAAAAAGGCAAGGCACAAATACTTTACACCAAAGACTTCTAATTTTACTTTTCATATAACCCTATACATATTCTTCAATACCTGCTAAAAagctaaaataacattttcattttataaacagGATGTCTTGGGATTGATAACTGATATGATGTGACAAAGGATAACAAGAGTAAGATCCATACATATAATTTTCAAAGAAATGTTGGTTTTTAAacctatacaatattataagatgacatgtttatttactcacattttaattggaaatgatgtacttttttttcagatatctttatatggaaatatattattatgaaacaACATACATTGTGTCAGAAATTATAATTCTGTTTTCTTGATCAtaacaaaacaagcacaaaaaactataaaatatgttattgtattgtcAAATCCCTGCAATTTCTGGTATCCACGGTTAAAGATGATACCTGGTAAATAAACACTTCCATGATTTACAAAACCTAATACCTTTTCTTCAAGGTGAATTCTTATTTAGAAGGTTAAACATAAATACCTCAGATGCCTGGATTTAGATACTTTTTAATAAGCATCTTCAAAAAAGATTTGTTAATAAATTCTAA

Function

GO:

id name namespace
GO:0006508 proteolysis biological_process
GO:0004222 metalloendopeptidase activity molecular_function

KEGG:

id description
K01389 MME, CD10; neprilysin

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009382 True 3387 mRNA 0.38 23 36640234 36663731

Neighbor

gene id symbol gene type direction distance location
AMCG00009384 NA coding downstream 16737 36620406 ~ 36623497 (-)
AMCG00009385 NA coding downstream 63761 36576207 ~ 36576473 (-)
AMCG00009383 NA coding downstream 89548 36536166 ~ 36550686 (-)
AMCG00009374 NA coding downstream 731722 35907212 ~ 35908512 (-)
AMCG00009373 NA coding downstream 835149 35423478 ~ 35805085 (-)
AMCG00009388 NA coding upstream 69448 36733179 ~ 36767720 (-)
AMCG00009389 rap2b coding upstream 176385 36840116 ~ 36840337 (-)
AMCG00009391 p2ry1 coding upstream 209941 36873672 ~ 36874729 (-)
AMCG00009390 mbnl1 coding upstream 236562 36900293 ~ 36921139 (-)
AMCG00009394 NA coding upstream 425052 37088783 ~ 37097327 (-)
G56612 NA non-coding downstream 246716 36096808 ~ 36393518 (-)
G56611 NA non-coding downstream 534815 36080635 ~ 36105419 (-)
G56570 NA non-coding downstream 750552 35889450 ~ 35889682 (-)
G56564 NA non-coding downstream 826020 35782424 ~ 35814214 (-)
G56549 NA non-coding downstream 1049142 35590768 ~ 35591092 (-)
G56710 p2ry1 non-coding upstream 205817 36869548 ~ 36871823 (-)
G56742 NA non-coding upstream 504263 37167994 ~ 37168244 (-)
G56795 NA non-coding upstream 537301 37201032 ~ 37267831 (-)
G56818 tsc22d2,LOC105899227 non-coding upstream 636813 37300544 ~ 37367669 (-)
G56831 LOC106583953,LOC106560594 non-coding upstream 754683 37418414 ~ 37422521 (-)
G56568 NA other downstream 767637 35872123 ~ 35872597 (-)
G56546 LOC103376870 other downstream 1100424 35538887 ~ 35539810 (-)
AMCG00009347 gmps other downstream 2277893 34334261 ~ 34362341 (-)
G56438 kcnab1a,kcnab1,LOC107671078,LOC107675612,LOC107566585,LOC108263953 other downstream 2324226 34239484 ~ 34316008 (-)
AMCG00009342 kcnab1 other downstream 2366150 34227274 ~ 34274084 (-)
G56800 NA other upstream 552229 37215960 ~ 37220076 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other upstream 616817 37280548 ~ 37285365 (-)
AMCG00009408 NA other upstream 621845 37285576 ~ 37394988 (-)
AMCG00009417 NA other upstream 803523 37467254 ~ 37476035 (-)
AMCG00009437 NA other upstream 1225771 37889502 ~ 37908968 (-)

Expression


Co-expression Network