AMCG00009386


Basic Information

Item Value
gene id AMCG00009386
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36690833 ~ 36698116 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009386
atgccttCAACCTCCAGCTCGCCggctttaaataaaaccatccTTTTTACGGAAAGCTACGAGAGAATGGATGCTGCTGACGCCCAGACGCAAATGAGCTTGCTTTTGTTTGGCTTGTCTTTGGTTATCACACTGGTTACTTTCCTGGGTAGCCTCTATTCGCTCCTCTCTTTGCTGAGGATGCGGAACAAGACCTCGCTTTCTCTCATAGTGGCCTCTATGTCCATAGACGACCTGATCAGTGTGGTACCGCTCTCTTTGTTCATGACTGTGCAATGGGAAGTCGACAGTGCACACAAGTCTGGGGCTCGGTGTACTTTAGCAGGACTTCTGTATATTTTCCAGGGGATCTCAAGTAATCTGAAGGCATCCCTGATGGTGGTCTATACTTTTTACATCACCAAACGTTTCGGGGTCTTCCAGTCTGCCAAACGGCCGCTGAGGATAGTGTGGGCTATACTCGCCGTGTGGGTGGCCAGTCTGGTGGTCAGCATCTTACCTGTTTGCGGCTGGGGCTCCTTCTCCCCGACGGATATGGGTTGCTTCGCAGACAGCACTAGTTCTTACACTGTACTCCTTTTTGTGTTgtattctgtgtgtttctgcGTCCTGGTGGCGTTTTCTGTGCCTCTCACCCATCAGCTGCTGTGCTCAGATGGGCACCAAAGGAGCATTCACCCCAGCTATTTGGAGATCGCCAGGCAACACGTTGGCCAGGGCGCAGCGCCCGTTTGTGATATCCCATCGTTGTCTGGTCAAGACAGCCTCGATAAAACTTTCAGAAGTTACATTGAGAGAACTGAGAATTCATTGCATCTAAACAATAAAGTGGAGACCCACACTTGCTCGAGTCCCCCGGCCCAGTATCAAAAAGATGCCATCCAAAGCGACAGGGACTCCCCTGTATTTTTTGCACAAAAGCGCTTTTCTTTGATTCTGGCGATGATTAGAAATATGTTGTGGATGCCAATGATGATACAGATCTTTGTGAGTCACGTCCTTCATTTCAAGAGCTCGTCCTTTGAGACCCTTGGTTTCATCCTGACCTTGCTCTCCGCGGCCGTCACGCCCGTGTTTGTCCTGTCGGAGCGGTGGTTACACCTCCCGTGTGGCTGTTTCATCAACTGCCGGAGGGAAGCCTACAGCCTCTCATATCCAACCATGGCTAAAAAGCGAGGCTTCGAGTTTAACCTCTCCTTTCAACAAGGATACGGTATTTATAAAATAGCCCAGGCTAATCATTCTGGCCCGGAGAAGGACTTGTACCACAACCTGCTGAACTGCGAGGCCAATTCAAGGAAAGCAACCCAAACAGACCTCAGCCGGGCTTCGGGCTGCGCCCAACTCGAGTTCAGCACCACGCCTTGGGAGGACAGCTCCCTCCACACAGCGCGGCACAAACCCAGCGGCCCCGGCCAGGCGGAGCAGGACGGCTTCGTGTGCTGCACCACCGAGTACGTCCAGGACGAGAACAATGACACGTCCTCGGTGTTCGAGGGGCCAGAGAGGAGGCTTTCACACGAGGAATGCCGGAAGGTGGAACTCTCTGACTGGGAATGGTGTCGCAGCAAATCCGAAAGGACCCCTCGCCAGAGGTCTGGAGGGGGGCTGGCGATCCCTCTATGTGCGTTTCAGGGAACGGTGTCCCTACATGCACCTACTGGGAAGACCCTCTCACTGTCCACGTACGAAGTGAGCAGCGATGGCTTCAAAATCTCCCCGACCTCGAAGAAAATTGAAGTATATCGTTCCAAAAGCGTGGGCCACGAACCCAGCGCTGAAGAATCCCCAAACAGCATTGCGGACACCAATGTGAAAATCCACCTGGAAGTGCTGGAGATCTGCGACAACGAGGAGGCCATGGACACTGTGTCTATAGTAAGCAACATCAGCCAGTCCTCGGCACATGCCCGCTCGCCCTCCTTACGCTACTCCCGGAGAGAAAACAGATTTGTATCCTGTGACCTGGGAGAGACGGCCTCTTACTCACTGTTTATTCCCACAAACAACCCTGACAGTGACATTAATATAACAATTCCTGACACTGTAGAGGCACACAGGCAGAACAGCAAGAAGCAGCATCAGGATAAATCAGGTTACCGGgaggaaatacaattattaaatgaggCCTATAGGAAACAGGAAGAGAATCCACAGAACTGA

Function

GO: NA

KEGG:

id description
K08433 GPR149; G protein-coupled receptor 149

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009386 True 2163 mRNA 0.52 4 36690833 36698116

Neighbor

gene id symbol gene type direction distance location
AMCG00009381 NA coding upstream 78904 36576217 ~ 36611929 (+)
AMCG00009379 NA coding upstream 145116 36528946 ~ 36545717 (+)
AMCG00009380 NA coding upstream 175107 36515194 ~ 36515726 (+)
AMCG00009378 NA coding upstream 273830 36410058 ~ 36417003 (+)
AMCG00009376 NA coding upstream 484335 36205885 ~ 36206498 (+)
AMCG00009387 NA coding downstream 6173 36704289 ~ 36731243 (+)
AMCG00009392 NA coding downstream 210980 36909096 ~ 37086094 (+)
AMCG00009393 NA coding downstream 388401 37086517 ~ 37087593 (+)
AMCG00009396 NA coding downstream 435113 37133229 ~ 37145082 (+)
AMCG00009401 NA coding downstream 486508 37184624 ~ 37192497 (+)
G56629 NA non-coding upstream 59019 36627195 ~ 36631814 (+)
G56623 NA non-coding upstream 211458 36476438 ~ 36479375 (+)
G56584 NA non-coding upstream 656138 35927372 ~ 36034695 (+)
G56582 NA non-coding upstream 764638 35925938 ~ 35926195 (+)
G56567 NA non-coding upstream 819793 35870828 ~ 35871040 (+)
G56698 NA non-coding downstream 176962 36875078 ~ 36875398 (+)
G56694 NA non-coding downstream 202177 36900293 ~ 36975061 (+)
G56712 NA non-coding downstream 331090 37029206 ~ 37029542 (+)
G56747 NA non-coding downstream 490452 37188568 ~ 37188778 (+)
G56754 NA non-coding downstream 495610 37193726 ~ 37195088 (+)
G56536 LOC100846954 other upstream 1301506 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2321576 34363419 ~ 34369257 (+)
G56368 NA other upstream 2659388 34000796 ~ 34031445 (+)
G56369 NA other upstream 2672018 34015670 ~ 34018815 (+)
G56060 NA other upstream 4525468 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 595787 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 649992 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 723901 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 832706 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 910189 37608305 ~ 37616696 (+)

Expression


Co-expression Network