AMCG00009392


Basic Information

Item Value
gene id AMCG00009392
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 36909096 ~ 37086094 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009392
ATGTGCATTGCTCTGGAGgaaggaagaaagagaaaaagaaagaaaggcagaaatCTGCAGGTGAAAGCGCCGGAGTCTGTGACCTACCATGGCGGCTGCAGTAGCTGCTGCGGCCTGAGCAGCGGCGGCTTGGTTGACCTGGTGCTGGGCGGCCTTAATCTTGGCCTGCAAGTGCGCAGGAGGGTGGAATTCCCGCGCTGGTACTCCCGGCACACCTGCAACACCAGACCCATGCCGGTCTGTCCTCATGAGCTTCTGAGCTGCGGCGGCGGCAGCAGATTGCATGGGGACGCCCGGGTTTCCTGTGACCAGCACTGGGGCGCTGGGCAGGATCTCTGCGGGGACCAGGCCCGGAGACACGGGACCCAGttaAGAAAGGAGATAATGCGAAAGCCAGTCGGCACTCCCACCGCTAACCATGGTGGAGCAAACCAGGCATCGGACACCCGTGAAGCACGTGTGCTGGCCGACTTGGAGGACTGTCTCCGGAAGACTCTTCCATTCTTTCGGGACATGGGCAAGGACCCTGAGGTGCCATTGAAGCATCAGCATGTCATAAGCGAGGCAATGGAGACGGTGGCCAGAAGAAAGCTACTGTCTTGCCCACTGAAAGTGATGGCCTCGATCGTCACTGTGGGGATCCTTGAGAGCGGCTGCGGTCTGCAGAAGCTGAATGTCCGGTGCACCAATCAGCGGGTCCCAGATGGGTTCCTGTCCGGCATTGACAGTCGATTTGTTTCTCAGTCTCATGGTGCCGACCCTTTCCCAGCCGAGATCGAGATCGCTGTCCTGTGTGAAATGCTCGATGTCCTGGTGTTTAGTTATGTCCTTGTGATACGGGTTCTGAAGAACATGCAGCAAAGGTTCCAGAATGCAGAGAAGGTTTTAACTAGggtcAATTCTTAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009392 True 906 mRNA 0.57 11 36909096 37086094

Neighbor

gene id symbol gene type direction distance location
AMCG00009387 NA coding upstream 177853 36704289 ~ 36731243 (+)
AMCG00009386 NA coding upstream 210980 36690833 ~ 36698116 (+)
AMCG00009381 NA coding upstream 297167 36576217 ~ 36611929 (+)
AMCG00009379 NA coding upstream 363379 36528946 ~ 36545717 (+)
AMCG00009380 NA coding upstream 393370 36515194 ~ 36515726 (+)
AMCG00009393 NA coding downstream 423 37086517 ~ 37087593 (+)
AMCG00009396 NA coding downstream 47135 37133229 ~ 37145082 (+)
AMCG00009401 NA coding downstream 98530 37184624 ~ 37192497 (+)
AMCG00009399 NA coding downstream 106411 37192505 ~ 37206412 (+)
AMCG00009402 NA coding downstream 129937 37216031 ~ 37216975 (+)
G56698 NA non-coding upstream 33698 36875078 ~ 36875398 (+)
G56629 NA non-coding upstream 277282 36627195 ~ 36631814 (+)
G56623 NA non-coding upstream 429721 36476438 ~ 36479375 (+)
G56584 NA non-coding upstream 874401 35927372 ~ 36034695 (+)
G56582 NA non-coding upstream 982901 35925938 ~ 35926195 (+)
G56747 NA non-coding downstream 102474 37188568 ~ 37188778 (+)
G56754 NA non-coding downstream 107632 37193726 ~ 37195088 (+)
G56775 NA non-coding downstream 199749 37285843 ~ 37291665 (+)
G56982 NA non-coding downstream 977696 38063790 ~ 38068153 (+)
G56995 NA non-coding downstream 1043988 38130082 ~ 38133966 (+)
G56536 LOC100846954 other upstream 1519769 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2539839 34363419 ~ 34369257 (+)
G56368 NA other upstream 2877651 34000796 ~ 34031445 (+)
G56369 NA other upstream 2890281 34015670 ~ 34018815 (+)
G56060 NA other upstream 4743731 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 207809 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 262014 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 335923 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 444728 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 522211 37608305 ~ 37616696 (+)

Expression


Co-expression Network