AMCG00009399


Basic Information

Item Value
gene id AMCG00009399
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37192505 ~ 37206412 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009399
ATGAGGCAGGCGGAGAATCCTGTAAGGTTCTGCACAATGCACAGACATTATACGAATGAGACGCACTCCAGTGACAAAGAGGATGTTGAATTCACCAAATTTCTGTTCCCCTGTCTATATGCACTTGTGTTCTTGATCTCTGTGTTCCTCAACACTGTGGCTCTGTGGATGTCCTTCCACATTCCCTCCGCCACCTCCTTTCTTTTCTACCTCAAAAACCTGATAATTGCTGACCTACTAACCACGCTGACCATCCTTGTCAAGCTGCTGAGTGAATCCACGCTTGCTTCCCAGCAGCTAAAGGTGTTCTGCTGCCGCTACTCCATGGTCATCTTCTACTTCACCCTGTACATCAGCATCATCCTTATGACCCTCATTTGCCTAGACCGATACCTGAAGATAGTCAGACCCTTCGGGGCCTCCTTCATTCGGAATAAGAGGTTTGGCAAAGCCGTGGCCATCCTCATTTGGATTGTGCTGTTCTGTACAACGGCCATGCCGAACATGATCCTGACAGACCAAGACCAGCACAACTCCTCGGCCAACTCCTCAGTCACGGTCCACTGCATCTGCCTGAAAGGACCTCTGGGAAAAAAGTGGCACGACGCCGTCATCCTCATTAACACACTGATCTTCTGGATTTGCTTCGTAGTGATGGTAGTTTTTTACCTGCTTATCAGCAAGGAGGTCTACGAGTCATATCGCAAGACCAACAGTGACAACAAGAAGGCCAGAAGACATACAAAGGCCAGAGTGTACATCATAATCGCAGTGTTCTTTCTGTGTTTCGCACCATATCACTTCACAAGAATCCCATATTTTCTGAGGTCTCAGAAGCACTGTGTGACCCACAACAGCTTGCACATCGTGAAAGAGATTACACTGTGGGTGACTTCAACTAACACATGTTTAGATCCactcatttatttgtatctctGCAAATCCTTCAGGAGAAAGTTTATCAAGACTGTGAGCATGAAGAAGGGTTTGCCAGATAAACCCAATTACTCAAAAGGTTACGAGACATCTACGAATGCAGTCAGCATGAACTTGAGTCAGAGTAACAGCACTGGGGAGCAGATCCCGGTGAAGTGTGTACGGGACACCAGTGTCACAGCAGTAGTGTTCCCCATCCTGTACAGCCTGCTGTTTGTGGCGGCTCTGGTACTTAACATCCTGGCTGCGTGGATCTTCTTCCAGATCCCAAACACATCCACCTTCGTTGTGTACCTCAAAAATGTGGTGGTGGCTGACCTGCTGATGACCGTGACCATCCTGATCAAAGTCGTAAGCGATTCCGATGCCGGCTCCTGGCAATTGAAGGCATTCACGTGCCGCTTCTCCGCAGTACTCTTCTACATGACCATGTACATGAGCATCCTGCTGCTGGGGCTGATCAGCCTGGACCGCTACCTGAAGATAGTGCGACCCTTCGGGAAAACCTGCATGCAGAAGGTGGCGTTCGGCAAGGCCGCAGCCATTGCCATGTGGGGGGTGATGTTCTTTGTGACGGCCCTGCCCAACATGATCCTGACGGACAGGGAGCCAGCACACACCACCAAACTGAAATGCAGCTCCCTGAAGGGACCCCTCGGAATGAAATGGCATATGGTCACCAACCACTTCTGCCAGTTTGTTTTCTGGGGCACGTTTACCCTGATGGCCTTCTGTTACACTTTCATCAGTAAGAAGGTGTACGAGTCTTACCAGAACTCACGCAGCAAGTCCAAAGCCACGTCGCAGAAAACAAAGGCAAAGGTGTTTGTTGTGGTGGCTGTGTTTTTTGTCTGCTTCGCACCCTTCCACTTCACTAGGATACCTTACACCATGAGCCAGACTGGCAGCGTGGACAACTGCAGAATGCAGCAAGCATTGTACATTGCCAAGGAAACGACTCTGTGGCTGTCGGCTACTAACACCTGCCTGGATCCTCTGATATACATATTCTTGTGCAGAATATTTCGCAAGAAGCTGGCTGATGCTCTGAGGCTGAAATCCAAGTGTCTTCCCATTGAAGATTCAGAGTCAACTGTAGAAACCTCTACGAAAATGGATACAACACCTTTGTAAAATGCAAGCTTCACCTCCAAACACAGGGAAAtgatgtacatgtatatttttcaatatttattttgtatagagATACATTTCATTGAGGCTTTGAAAATAGACgcaatttataataattttaaaatccaattatAACTAAGCTTTGGCGCTAAGAACAATGTGGAATCAGGGGCCAGCAGATTCAGTGCATTCCTGCAGTTTTCCCTATCATGCTCTTGCATCCAGGAAGAAGATGACAACGCAGAATTTTACATTCTTAGCAGATAATGGCCCAGAGCACACTGCCGGGACATGTCACACTGAACTGTGTTCTATATTTAATTACTGTCATGTAAACTGAGTCCTCACAAATTACCAactaatttattaaatacattaatactttGTGGTTGAGTTCACTGCTAAATATTATCATATAATATATTGAGTTCTAAGCATTGTACACACTACTACATCTACACAACTgtgcatatttttattgtagctcctaaaattaataaacaattacaaaactcTCATGGATAAAAATATTATCTAATCGTCTTCttggtattttttgtttttaacatcagaaaagtacattttcaggTAAAGAGAGTTCAGCTGAAATTCTGTAGCCATAGCAACTGCATAATTATAAACTCAACCAATTACTATTTGAAGGTAGCATCTCACCTGAAAAAGTCCCTTGTGGTTGTATGGGGCAATAAACCACTTAGATAGAAACCCATATGCCATAGTTCAGACTGCCATTAGCAGTAAGATGTTTCTTTTACATTGACTGTACCACTTGTTTGTTCAAATTATCCAGGGGAAAAgcaacaatttacatttaaattcattgAATGTTCTGAAGTGTTAATAAACAATATCTTGTTTTGAATTTCCATATGTAGACCCTTATTCCCATAACTCCATCTACAGAATCAGGTTCTcttcatttagaaaacaaacccaCTCAGACCTTGCCAGTGTGAGCTCTTTAATGAATACATGTAAGCTTGGGATGGGCTGTTACAAACCTGATCTGTTCTACATgttcaacctctccaaatcagttctcctctttttccccca

Function

GO:

id name namespace
GO:0007186 G protein-coupled receptor signaling pathway biological_process
GO:0035590 purinergic nucleotide receptor signaling pathway biological_process
GO:0004930 G protein-coupled receptor activity molecular_function

KEGG:

id description
K08388 P2RY13; P2Y purinoceptor 13

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009399 True 3147 mRNA 0.44 3 37192505 37206412

Neighbor

gene id symbol gene type direction distance location
AMCG00009401 NA coding upstream 8 37184624 ~ 37192497 (+)
AMCG00009396 NA coding upstream 47423 37133229 ~ 37145082 (+)
AMCG00009393 NA coding upstream 104912 37086517 ~ 37087593 (+)
AMCG00009392 NA coding upstream 106411 36909096 ~ 37086094 (+)
AMCG00009387 NA coding upstream 461262 36704289 ~ 36731243 (+)
AMCG00009402 NA coding downstream 9619 37216031 ~ 37216975 (+)
AMCG00009403 NA coding downstream 10674 37217086 ~ 37234594 (+)
AMCG00009397 NA coding downstream 37821 37244233 ~ 37249694 (+)
AMCG00009400 NA coding downstream 47527 37253939 ~ 37261404 (+)
AMCG00009395 siah2,LOC105023934,LOC106567892,LOC108431284,LOC106603586,LOC107587204,LOC107732330 coding downstream 56139 37262551 ~ 37266023 (+)
G56747 NA non-coding upstream 3727 37188568 ~ 37188778 (+)
G56712 NA non-coding upstream 162963 37029206 ~ 37029542 (+)
G56694 NA non-coding upstream 217444 36900293 ~ 36975061 (+)
G56698 NA non-coding upstream 317107 36875078 ~ 36875398 (+)
G56629 NA non-coding upstream 560691 36627195 ~ 36631814 (+)
G56775 NA non-coding downstream 79431 37285843 ~ 37291665 (+)
G56982 NA non-coding downstream 857378 38063790 ~ 38068153 (+)
G56995 NA non-coding downstream 923670 38130082 ~ 38133966 (+)
G57036 NA non-coding downstream 996382 38202794 ~ 38280479 (+)
G57161 NA non-coding downstream 1421507 38627919 ~ 38628135 (+)
G56536 LOC100846954 other upstream 1803178 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 2823248 34363419 ~ 34369257 (+)
G56368 NA other upstream 3161060 34000796 ~ 34031445 (+)
G56369 NA other upstream 3173690 34015670 ~ 34018815 (+)
G56060 NA other upstream 5027140 32161760 ~ 32165365 (+)
AMCG00009404 NA other downstream 87491 37293903 ~ 37297009 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other downstream 141696 37348108 ~ 37367671 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 215605 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 324410 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 401893 37608305 ~ 37616696 (+)

Expression


Co-expression Network