AMCG00009413


Basic Information

Item Value
gene id AMCG00009413
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37405848 ~ 37410371 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009413
TCACAGGGCTGTCTGTGTGCATCCCTCCCCTCTGCCTCCAGCCCACTGAGCCCTGCCATGCCCTTCACAGGACTGGCTAACACTAAGGACTGATGCTCGCGCCTGCTCAGAGCTCTAAATACAAAGGGCTGTTGCTTTttcgattttattttatttgaccgTTTTAACTTTTCCAACCATGAGGATCTTCATTGCTTTTGAGGGTTTGTGTGAGCCGTTTGACATTTCCCAGGACCAGACAGTAAGGGCTGTAAAACTGATGATCAAGGACTTTTTCCATGTGCAGCTCTCAGATGATAGGCAGGTGCGCCGGTTCCTGGAGCTGAGCTATGCGGGGGCGTGTCTGCAGGACAACTGGGTGCTGGCCGATGTGGGCATCACCCCGGGGGTCACTCTCAGGTGTGTCCTCAAGGAGACACTGCCCATCATGGGGAACATCTTCCTCCTGAGCACTGCCGTATCCCACCTGAAGACTCAGGTGTCCCGGCAGTGTGGCCTCCCGGTCAGCGTGTTCAGGCTCCGCACTCCCAATGGGGTGGAGCTCTATGACTGCAACCGACTGGACAGTTACGGGATAGATGTAGGAGCCACTTTGCATTTGGACGTGTGGGCCGGATGGAAGGAGTTCTTGAGAGGCTGCTTACTGGGTCACAAGCACTCAGTCCGGCACCGGCTCTCACAGCAAGAGAACTTGCTGAGgttcCAGCAGCGAGTGGCTCTGTACATTGCGGCATTCCTGGGGCACCTGAACCTGGCAGGCTGGCTGCTGGGTGCAGGGGTGCGTGCGGATGAGCCGGTGGGGGTGCACCCCTCGCGGGAGTGGTGCCGCGACACTGACCACTCCGACGTCGCCAAGTGCCCCGTACATGCTGCCGTTGAGGCTGGCCAACTGCTGATCTTGAAGCTGTTTCTGAGCAGTAGTGTGGAGTGCCTGGACTGCATAGACCCTTGGGGCCACAGCCTGCTGCAGATCGCTATCCGTCAGAGACACAAGGATACTGTGCTCTACCTGGCCTCCAAGCTGTGGTCCGTGGTCTCCTGCCCCCTGCTCTCACTGCCCCTCCGCACCTACGTGAAGATCAAGCGCTGGCTGCTGCATGCCCAGAAAACAATCGCATCCAGGAAGTTCCTTGGCCGGTCTGTGAGGGTCGGGGACAGCGTCCTGGTGGATGGCTTCACCCAGCTTGAGACGAGGGCGAAGGTCAAACTCAAGACCAAAGATGTCCTCTCTGCTAGGGTTTCAGGAGGAGGCTGTGTTGCCCCAACCTGGCCTGCAGGGTGCGGACTGGAGGACAGCTCACTTCCTAGAAACATGCGGCTGCCTCGGTTACAACCTGCCACCAGAGACAGAGTCAGACGGAGGAGAAGCAACAACAGGAGCGTGAGGAGAGCAGAATGCCCGTCCCCTGAGGACAGTGAGAGGAATCAGAACTTGTGGAAGACCAAAGTGCCCCTTCCCCCCATCTCCCATGACACCAACCCCCGGCCGTGCTTCATCTACGCCTCCCCGGACGCCCCCGCCATCCTCTCTTCTTCGCTGGCCTCGTTCTCTGACCACAGTGGACGCACACTCAGGGAGAACGCCATCTTCTGCTTGGCACTGGCCAGTTCCTTTACAGAGAAGCCGTGGCTGCAGCAGCTTGGGGTAGCTAGGACCCTGGCCCGACGAACAGTGCAGAAGATCAGTTAGAACAACATGCTGTCACAGACCCTCGACCCAGTTGTCCTGAATGAAAGGAACAATCAAGAACATAGGACACCAGAGTTAGGGTTTGAGAATTGGTTACAGCTACATTTCCCAGCATTTGTGGCCAACTGaacagtgtgttgtttttgaatCATGGAATtatcacataaataaaacatctgattAATTTTAACTGTGGA

Function

GO: NA

KEGG:

id description
ko04514 Cell adhesion molecules

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009413 True 1887 mRNA 0.56 7 37405848 37410371

Neighbor

gene id symbol gene type direction distance location
AMCG00009410 NA coding upstream 103672 37298590 ~ 37302176 (+)
AMCG00009398 NA coding upstream 127963 37268364 ~ 37277885 (+)
AMCG00009395 siah2,LOC105023934,LOC106567892,LOC108431284,LOC106603586,LOC107587204,LOC107732330 coding upstream 139825 37262551 ~ 37266023 (+)
AMCG00009400 NA coding upstream 144444 37253939 ~ 37261404 (+)
AMCG00009397 NA coding upstream 156154 37244233 ~ 37249694 (+)
AMCG00009414 commd2 coding downstream 3393 37413764 ~ 37417955 (+)
AMCG00009420 NA coding downstream 66819 37477190 ~ 37492489 (+)
AMCG00009418 NA coding downstream 84629 37495000 ~ 37499186 (+)
AMCG00009421 NA coding downstream 95392 37505763 ~ 37516480 (+)
AMCG00009419 NA coding downstream 109952 37520323 ~ 37521453 (+)
G56775 NA non-coding upstream 114183 37285843 ~ 37291665 (+)
G56754 NA non-coding upstream 210760 37193726 ~ 37195088 (+)
G56747 NA non-coding upstream 217070 37188568 ~ 37188778 (+)
G56712 NA non-coding upstream 376306 37029206 ~ 37029542 (+)
G56694 NA non-coding upstream 430787 36900293 ~ 36975061 (+)
G56982 NA non-coding downstream 653419 38063790 ~ 38068153 (+)
G56995 NA non-coding downstream 719711 38130082 ~ 38133966 (+)
G57036 NA non-coding downstream 792423 38202794 ~ 38280479 (+)
G57161 NA non-coding downstream 1217548 38627919 ~ 38628135 (+)
G57164 NA non-coding downstream 1222726 38633097 ~ 38633351 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other upstream 38177 37348108 ~ 37367671 (+)
AMCG00009404 NA other upstream 108839 37293903 ~ 37297009 (+)
G56536 LOC100846954 other upstream 2016521 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 3036591 34363419 ~ 34369257 (+)
G56368 NA other upstream 3374403 34000796 ~ 34031445 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other downstream 11646 37422017 ~ 37463505 (+)
AMCG00009429 NA other downstream 120451 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 197934 37608305 ~ 37616696 (+)
G57105 NA other downstream 1031884 38442255 ~ 38457592 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other downstream 2024529 39434900 ~ 39437017 (+)

Expression


Co-expression Network