AMCG00009419


Basic Information

Item Value
gene id AMCG00009419
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37520323 ~ 37521453 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009419
GAGACTGCAGACAAAGTGCTGGACATCTTCAGCACTGTGGAGCCCTCCCAGCTGCCCCATGTGGTGTGCAGCCCCTTCATGAAGAACGCCACCAGCGCGGCCGCCTACTCCCATCTGCAGCACCTGGAGGCCTCGCTGCCCGCTGTCATCGTCACCCTGTGCAAGGCAGCCGTCGCCCTGAAGATGGGCGACCTGGCGCTGTACCGGCAGGAGATGGATCGCCACGCAGAGATGCTGCAGGTGTATGGCTTCCTGGAGGAACCCAGGCTGCTGCTGCATCGGCAGGGGAAGGCGGCAGTGCCCACAGCCCTGGCACAGCACCTGAGCGACATGCAGGATGGCCTGCTGGTGGCCGCCATGGTGGCGCTGCACGAGAACAGCAAGTTGAAGCTGGAGGAGGCGGACTCGTTCTTTCAGGAGCTGTGTAGAGAGGGCAGCAGCCAGGCAGAGAGTGGGCCTCAGCTCCTGGTGGACTTCTGGGAAGCTCTGCTGGTGGCCTCTTCGCAGGGTGCCGTGATCCAGGAGCTGCTGTTCCGCCTGGCCTCGGTGTACATTGACCGCATCGCCAGGAGGGAGAGGTCCGGCATAAAGCCACTAAAGACGGCTGAGGACCTGatcaATTCCTGCTCTCACTACGGGCTGCTCTTCCCCTGGGTGAACGTCATCACCCCCCCCCAGTTCAACCTCACCCACGACTACCAGGAGGACCTCCAGAAACTACAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009419 True 723 mRNA 0.63 4 37520323 37521453

Neighbor

gene id symbol gene type direction distance location
AMCG00009421 NA coding upstream 3843 37505763 ~ 37516480 (+)
AMCG00009418 NA coding upstream 21137 37495000 ~ 37499186 (+)
AMCG00009420 NA coding upstream 27834 37477190 ~ 37492489 (+)
AMCG00009414 commd2 coding upstream 102368 37413764 ~ 37417955 (+)
AMCG00009413 NA coding upstream 109952 37405848 ~ 37410371 (+)
AMCG00009427 NA coding downstream 98049 37619502 ~ 37621390 (+)
AMCG00009438 NA coding downstream 509932 38031385 ~ 38059273 (+)
AMCG00009444 NA coding downstream 570947 38092400 ~ 38094123 (+)
AMCG00009443 gnb4,LOC108270972 coding downstream 603855 38125308 ~ 38129404 (+)
AMCG00009442 NA coding downstream 626522 38147975 ~ 38150946 (+)
G56775 NA non-coding upstream 228658 37285843 ~ 37291665 (+)
G56754 NA non-coding upstream 325235 37193726 ~ 37195088 (+)
G56747 NA non-coding upstream 331545 37188568 ~ 37188778 (+)
G56712 NA non-coding upstream 490781 37029206 ~ 37029542 (+)
G56694 NA non-coding upstream 545262 36900293 ~ 36975061 (+)
G56982 NA non-coding downstream 542337 38063790 ~ 38068153 (+)
G56995 NA non-coding downstream 608629 38130082 ~ 38133966 (+)
G57036 NA non-coding downstream 681341 38202794 ~ 38280479 (+)
G57161 NA non-coding downstream 1106466 38627919 ~ 38628135 (+)
G57164 NA non-coding downstream 1111644 38633097 ~ 38633351 (+)
AMCG00009415 wwtr1,LOC107588432,LOC107732229,LOC107662944,LOC107572084 other upstream 56818 37422017 ~ 37463505 (+)
AMCG00009405 pfn2,LOC105899220,LOC106598797,LOC105028925 other upstream 152652 37348108 ~ 37367671 (+)
AMCG00009404 NA other upstream 223314 37293903 ~ 37297009 (+)
G56536 LOC100846954 other upstream 2130996 35388914 ~ 35389327 (+)
AMCG00009345 NA other upstream 3151066 34363419 ~ 34369257 (+)
AMCG00009429 NA other downstream 9369 37530822 ~ 37605124 (+)
AMCG00009428 NA other downstream 86852 37608305 ~ 37616696 (+)
G57105 NA other downstream 920802 38442255 ~ 38457592 (+)
AMCG00009480 sst1.1,LOC106579799,LOC105009822,LOC107586749,LOC103023622,LOC107582287 other downstream 1913447 39434900 ~ 39437017 (+)
G57430 NA other downstream 2426553 39948006 ~ 39949200 (+)

Expression


Co-expression Network