AMCG00009426


Basic Information

Item Value
gene id AMCG00009426
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030126.1
NCBI id CM030126.1
chromosome length 46242406
location 37530723 ~ 37535894 (-)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00009426
ATGAAGCAGTATGTGTGCTTGCTGCTGTGCGCCCAGCTGCTGAGTGGCTGGGTGAGAGCCGAGACCGCCGCCCCCGCCGCGGAGCAGCCCGGATCCTGCGAGGACCCCCATGCCCTGGCGGCTGCGGAGTTAGCCCTGCGCAAGATCAACTCTGACCGCAAAGAGGGCTTCTGGGTTGTTGGTCCATCCCGCTTTGTGGAGTTCACCATCCAGGAGACTGTATGCCCCAAGGACACACCTACACCTGAGCTTCCCCACTGTAAACTGCTGGACTGTGAGTTTgctGCATCCCAGGCTGAGAAGAAGAAGCACTTGAAGGCCAAAGACGACGGTGCCCACGAGGAGCACAGCCATCACCATGGCAACGACACTGCCCATGTCCACGGGCACGAGAGCCACGAGCATCACGAACACCAGCACCCCCACCTGCATGAGCACGAGCATCACCATGGCAAAGACCCTGCCCATACCCACGGCCAGGAGGGGCACGAGAGCCACGAGCATCACGGACACAAGCATGGGCATCACCATGGCAAAGGTCATGCCCACGGCCAGGAGGGGCACGAGGGCCACGTGCACCACCATCAGCACGGCACAGACGCTGCCCACACCCACAGCCATGCCCCAGCTGCTGCTGCCAGGCCCTTGGGCTCTGTGCATGTCCTCCCCCCAGAGGCGCACCCATCAGACCCCGCCCTGGACCATGAGCACGAAACCTCACACACCTGCCCCGGCAAGAAGAAGCACAACTTTGTTTAG

Function

GO: NA

KEGG:

id description
ko00260 Glycine, serine and threonine metabolism

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00009426 True 759 mRNA 0.62 3 37530723 37535894
Loading

Neighbor

gene id symbol gene type direction distance location
AMCG00009422 NA coding downstream 2535 37525531 ~ 37528188 (-)
AMCG00009416 rnf13,LOC106613488,LOC107551383 coding downstream 127842 37360085 ~ 37402881 (-)
AMCG00009412 LOC103360179 coding downstream 198696 37326755 ~ 37332027 (-)
AMCG00009406 tsc22d2,LOC107097579,LOC107727513,LOC105899227 coding downstream 225303 37300528 ~ 37305420 (-)
AMCG00009411 NA coding downstream 250971 37278886 ~ 37279752 (-)
AMCG00009423 NA coding upstream 1627 37537521 ~ 37543355 (-)
AMCG00009425 NA coding upstream 8345 37544239 ~ 37550476 (-)
AMCG00009424 NA coding upstream 18919 37554813 ~ 37559533 (-)
AMCG00009433 ncbp2 coding upstream 80165 37616059 ~ 37620375 (-)
AMCG00009430 NA coding upstream 85400 37621294 ~ 37633873 (-)
G56861 NA non-coding downstream 13069 37515969 ~ 37517654 (-)
G56831 LOC106583953,LOC106560594 non-coding downstream 108202 37418414 ~ 37422521 (-)
G56818 tsc22d2,LOC105899227 non-coding downstream 163054 37300544 ~ 37367669 (-)
G56795 NA non-coding downstream 262892 37201032 ~ 37267831 (-)
G56742 NA non-coding downstream 362479 37167994 ~ 37168244 (-)
G56927 NA non-coding upstream 100811 37636705 ~ 37734188 (-)
G57013 NA non-coding upstream 582534 38118428 ~ 38118843 (-)
G57015 NA non-coding upstream 589255 38125149 ~ 38125363 (-)
G57016 NA non-coding upstream 590087 38125981 ~ 38127340 (-)
G57017 NA non-coding upstream 591574 38127468 ~ 38127678 (-)
AMCG00009417 NA other downstream 54688 37467254 ~ 37476035 (-)
AMCG00009408 NA other downstream 135735 37285576 ~ 37394988 (-)
AMCG00009409 selenot,LOC107681817,LOC106599070,LOC107708642 other downstream 245358 37280548 ~ 37285365 (-)
G56800 NA other downstream 310647 37215960 ~ 37220076 (-)
G56568 NA other downstream 1658126 35872123 ~ 35872597 (-)
AMCG00009437 NA other upstream 353608 37889502 ~ 37908968 (-)
G57155 dner other upstream 1044391 38580285 ~ 38582820 (-)
AMCG00009472 NA other upstream 1292071 38827965 ~ 38837594 (-)
AMCG00009521 gigyf2,LOC107728389 other upstream 2585569 40121463 ~ 40157471 (-)
AMCG00009571 LOC107087052,LOC105890629 other upstream 4278665 41814559 ~ 41826934 (-)

Expression

AMCG00009426 Expression in all Baseline Samples

Bar chart with 16 bars.
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying values. Range: 0 to 1000.
End of interactive chart.

AMCG00009426 Expression in each Bioproject

Bar chart with 6 bars.
AMCG00009426 Expression in each Sample
The chart has 1 X axis displaying categories.
The chart has 1 Y axis displaying Expression. Range: 0 to 6000.
End of interactive chart.

Co-expression Network